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PDB: 1311 results

6URX
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BU of 6urx by Molmil
Crystal structure of ricin A chain in complex with inhibitor 5-phenyl-2-thiophenecarboxylic acid
Descriptor: 1,2-ETHANEDIOL, 5-phenylthiophene-2-carboxylic acid, DIMETHYL SULFOXIDE, ...
Authors:Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
Deposit date:2019-10-24
Release date:2020-06-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.
Acs Infect Dis., 6, 2020
4GKA
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BU of 4gka by Molmil
Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with phosphate
Descriptor: GLYCEROL, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Haapalainen, A.M, Ho, M.C, Suarez, J.J, Almo, S.C, Schramm, V.L.
Deposit date:2012-08-10
Release date:2013-02-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catalytic Site Conformations in Human PNP by (19)F-NMR and Crystallography.
Chem.Biol., 20, 2013
4GPW
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BU of 4gpw by Molmil
Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(hydroxymethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kondo, J, Koganei, M, Maianti, J.P, Ly, V.L, Hanessian, S.
Deposit date:2012-08-22
Release date:2013-04-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of a bioactive 6'-hydroxy variant of sisomicin bound to the bacterial and protozoal ribosomal decoding sites
Chemmedchem, 8, 2013
4M56
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BU of 4m56 by Molmil
The Structure of Wild-type MalL from Bacillus subtilis
Descriptor: D-glucose, GLYCEROL, Oligo-1,6-glucosidase 1, ...
Authors:Hobbs, J.K, Jiao, W, Easter, A.D, Parker, E.J, Schipper, L.A, Arcus, V.L.
Deposit date:2013-08-08
Release date:2013-10-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Change in heat capacity for enzyme catalysis determines temperature dependence of enzyme catalyzed rates.
Acs Chem.Biol., 8, 2013
4GPY
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BU of 4gpy by Molmil
Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicin
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(hydroxymethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kondo, J, Koganei, M, Maianti, J.P, Ly, V.L, Hanessian, S.
Deposit date:2012-08-22
Release date:2013-04-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of a bioactive 6'-hydroxy variant of sisomicin bound to the bacterial and protozoal ribosomal decoding sites
Chemmedchem, 8, 2013
6URW
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BU of 6urw by Molmil
Crystal structure of ricin A chain in complex with inhibitor 4-(2-thienylmethyl)benzoic acid
Descriptor: 1,2-ETHANEDIOL, 4-[(thiophen-2-yl)methyl]benzoic acid, DIMETHYL SULFOXIDE, ...
Authors:Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L.
Deposit date:2019-10-24
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes.
Acs Infect Dis., 6, 2020
4NOV
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BU of 4nov by Molmil
Xsa43E, a GH43 family enzyme from Butyrivibrio proteoclasticus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Xylosidase/arabinofuranosidase Xsa43E
Authors:Till, M, Arcus, V.L.
Deposit date:2013-11-20
Release date:2014-10-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural analysis of the GH43 enzyme Xsa43E from Butyrivibrio proteoclasticus
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
7V01
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BU of 7v01 by Molmil
Staphylococcus epidermidis RP62a CRISPR short effector complex with self RNA target and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZY
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BU of 7uzy by Molmil
Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V02
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BU of 7v02 by Molmil
Staphylococcus epidermidis RP62A CRISPR short effector complex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.97 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZZ
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BU of 7uzz by Molmil
Staphylococcus epidermidis RP62a CRISPR tall effector complex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.45 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZX
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BU of 7uzx by Molmil
Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
Descriptor: CRISPR non-self RNA target, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZW
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BU of 7uzw by Molmil
Staphylococcus epidermidis RP62a CRISPR effector subcomplex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V00
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BU of 7v00 by Molmil
Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
6TYA
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BU of 6tya by Molmil
Structure of N-terminus locked Esp with one pro-peptide residue - V67C, D255C
Descriptor: Glutamyl endopeptidase
Authors:Manne, K, Narayana, S.V.L.
Deposit date:2019-08-08
Release date:2019-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.065943 Å)
Cite:Structural insights into the role of the N-terminus in the activation and function of extracellular serine protease from Staphylococcus epidermidis
Acta Crystallogr.,Sect.D, 76, 2020
4KG6
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BU of 4kg6 by Molmil
Crystal Structure of AmpC beta-lactamase N152G Mutant from E. coli
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Docter, B.E, Baggett, V.L, Powers, R.A, Wallar, B.J.
Deposit date:2013-04-28
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complexed structures of AmpC beta-lactamase
To be Published
4JOS
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BU of 4jos by Molmil
Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Francisella philomiragia ATCC 25017 (Target NYSGRC-029335)
Descriptor: 1,2-ETHANEDIOL, ADENINE, Adenosylhomocysteine nucleosidase, ...
Authors:Sampathkumar, P, Schramm, V.L, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-18
Release date:2013-04-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Francisella philomiragia ATCC 25017 (Target NYSGRC-029335)
to be published
4KG2
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BU of 4kg2 by Molmil
Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Cefotaxime
Descriptor: Beta-lactamase, CEFOTAXIME, C3' cleaved, ...
Authors:Docter, B.E, Baggett, V.L, Powers, R.A, Wallar, B.J.
Deposit date:2013-04-28
Release date:2014-10-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Complexed structures of AmpC beta-lactamase
To be Published
4JCN
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BU of 4jcn by Molmil
Structure of ESP, serine protease from Staphylococcus epidermidis
Descriptor: Glutamyl endopeptidase
Authors:Krishnan, V, Sthanam, V.L.N.
Deposit date:2013-02-22
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Secreted proteases control autolysin-mediated biofilm growth of Staphylococcus aureus
J.Biol.Chem., 288, 2013
4KEN
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BU of 4ken by Molmil
Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefoxitin
Descriptor: (2R)-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Docter, B.E, Baggett, V.L, Powers, R.A, Wallar, B.J.
Deposit date:2013-04-25
Release date:2014-10-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Complexed structures of AmpC beta-lactamase
To be Published
4KG5
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BU of 4kg5 by Molmil
Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefotaxime
Descriptor: Beta-lactamase, CEFOTAXIME, C3' cleaved, ...
Authors:Docter, B.E, Baggett, V.L, Powers, R.A, Wallar, B.J.
Deposit date:2013-04-28
Release date:2014-10-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Complexed structures of AmpC beta-lactamase
To be Published
6AIE
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BU of 6aie by Molmil
Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
Descriptor: Putative methyltransferase
Authors:Venkataraman, S, Dhankar, A, Sinha, K.M, Manivasakan, P, Iqbal, N, Singh, T.P, Prasad, B.V.L.S.
Deposit date:2018-08-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
To Be Published
7FSV
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BU of 7fsv by Molmil
SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1454310449
Descriptor: 1,2-ETHANEDIOL, ALANINE, D-GLUTAMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-01-24
Release date:2023-02-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:SDCBP PanDDA analysis group deposition
To Be Published
7FT9
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BU of 7ft9 by Molmil
SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z45636695
Descriptor: 1,2-ETHANEDIOL, 4-[(METHYLSULFONYL)AMINO]BENZOIC ACID, ALANINE, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-01-24
Release date:2023-02-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:SDCBP PanDDA analysis group deposition
To Be Published
7FSJ
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BU of 7fsj by Molmil
SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z57744712
Descriptor: 1,2-ETHANEDIOL, ALANINE, D-GLUTAMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-01-24
Release date:2023-02-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:SDCBP PanDDA analysis group deposition
To Be Published

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