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PDB: 134 results

2JJE
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BU of 2jje by Molmil
Crystal structure of T330S mutant of Rv3290c from M. tuberculosis
Descriptor: L-LYSINE EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Tripathi, S.M, Ramachandran, R.
Deposit date:2008-04-03
Release date:2009-06-30
Last modified:2020-01-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutational Analysis of Mycobacterium Tuberculosis Lysine Epsilon-Aminotransferase and Inhibitor Co-Crystal Structures, Reveals Distinct Binding Modes.
Biochem.Biophys.Res.Commun., 463, 2015
2LRA
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BU of 2lra by Molmil
NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag
Descriptor: POSSIBLE EXPORTED PROTEIN
Authors:Tripathi, S, Pulavarti, S, Yadav, R, Jain, A, Pathak, P, Meher, A, Arora, A.
Deposit date:2012-03-28
Release date:2013-05-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag
To be Published
2KGY
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BU of 2kgy by Molmil
Solution structure of Rv0603 protein from Mycobacterium tuberculosis H37Rv
Descriptor: POSSIBLE EXPORTED PROTEIN
Authors:Tripathi, S, Pulavarti, S.V.S.R.K, Pathak, P.P, Meher, A.K, Jain, A, Arora, A.
Deposit date:2009-03-23
Release date:2010-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of Rv0603 protein from Mycobacterium tuberculosis H37Rv
To be Published
7U36
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BU of 7u36 by Molmil
Crystal structure of human GSK3B in complex with ARN1484
Descriptor: (3S)-1-[(2-fluorophenoxy)acetyl]-N-(pyridin-2-yl)pyrrolidine-3-carboxamide, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
7U2Z
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BU of 7u2z by Molmil
Crystal structure of human GSK3B in complex with G12
Descriptor: (3R)-1-[3-(2-fluorophenyl)propanoyl]-N-(pyridin-2-yl)pyrrolidine-3-carboxamide, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
7U31
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BU of 7u31 by Molmil
Crystal structure of human GSK3B in complex with G5
Descriptor: 5-(4-fluorophenyl)-4-[1-(methanesulfonyl)azetidin-3-yl]pyrimidin-2-amine, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
7U33
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BU of 7u33 by Molmil
Crystal structure of human GSK3B in complex with ARN9133
Descriptor: 3-[2-amino-5-(4-fluorophenyl)pyrimidin-4-yl]-N,N-dimethylazetidine-1-sulfonamide, CHLORIDE ION, Glycogen synthase kinase-3 beta
Authors:Tripathi, S.K, Balboni, B, Giabbai, B, Storici, P, Girotto, S, Cavalli, A.
Deposit date:2022-02-25
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of Novel GSK-3 beta Hits Using Competitive Biophysical Assays.
Int J Mol Sci, 23, 2022
3UME
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BU of 3ume by Molmil
Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 7
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Tripathi, S, Srajer, V, Purwar, N, Henning, R, Schmidt, M.
Deposit date:2011-11-13
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography.
Biophys.J., 102, 2012
3UMD
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BU of 3umd by Molmil
Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 4.
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Tripathi, S, Srajer, V, Purwar, N, Henning, R, Schmidt, M.
Deposit date:2011-11-13
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography.
Biophys.J., 102, 2012
5ZXE
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BU of 5zxe by Molmil
Structure of a consensus sequence derived from the FGF family
Descriptor: CHLORIDE ION, Consensus sequence based basic form of fibroblast growth factor, GLYCEROL, ...
Authors:Tripathi, S.K, Mandalaparthy, V, Ramaswamy, S, Gosavi, S.
Deposit date:2018-05-19
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of a consensus sequence derived from the FGF family
To be published
3DZN
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BU of 3dzn by Molmil
Thaumatin by LB nanotemplate method before high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-30
Release date:2009-07-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3E0A
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BU of 3e0a by Molmil
Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-31
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DZP
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BU of 3dzp by Molmil
Thaumatin by LB nanotemplate method after high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-30
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DZR
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BU of 3dzr by Molmil
Thaumatin by Classical hanging drop method before high X-Ray dose on ESRF ID29 beamline
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Tripathi, S, Pechkova, E, Nicolini, C.
Deposit date:2008-07-30
Release date:2009-07-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
9B3S
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BU of 9b3s by Molmil
Crystal structure of casein kinase 1 delta 1 with tethered phosphorylated tail
Descriptor: Casein kinase I isoform delta
Authors:Harold, R.L, Yaitanes, N, Tripathi, S.T, Partch, C.L.
Deposit date:2024-03-20
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Isoform-specific C-terminal phosphorylation drives autoinhibition of Casein kinase 1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8IU6
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BU of 8iu6 by Molmil
Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
Descriptor: GLYCEROL, Peptidyl-tRNA hydrolase
Authors:Pandey, R, Tripathi, S, Lanka, A.K, Zohib, M, Pal, R.K, Arora, A.
Deposit date:2023-03-23
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
To Be Published
8D7M
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BU of 8d7m by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7O
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BU of 8d7o by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7P
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BU of 8d7p by Molmil
Human Casein kinase 1 delta in complex with phosphorylated Drosophila PERIOD peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7N
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BU of 8d7n by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
6NBL
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BU of 6nbl by Molmil
Cytochrome P450cam-putidaredoxin complex bound to camphor and cyanide
Descriptor: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, CALCIUM ION, CAMPHOR, ...
Authors:Follmer, A.H, Tripathi, S.M, Poulos, T.L.
Deposit date:2018-12-07
Release date:2019-03-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ligand and Redox Partner Binding Generates a New Conformational State in Cytochrome P450cam (CYP101A1).
J. Am. Chem. Soc., 141, 2019
6X61
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BU of 6x61 by Molmil
Crystal structure of the N-terminal thioredoxin domain of SasA in complex with the N-terminal CI domain of KaiC from Thermosynchococcus elongatus
Descriptor: Adaptive-response sensory-kinase SasA, Circadian clock protein kinase KaiC, PHOSPHATE ION
Authors:Swan, J.A, Tripathi, S.M, Partch, C.L.
Deposit date:2020-05-27
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Reconstitution of an intact clock reveals mechanisms of circadian timekeeping.
Science, 374, 2021
6NPR
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BU of 6npr by Molmil
Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Descriptor: ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Toor, J, McShan, A.C, Tripathi, S.M, Sgourakis, N.G.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Molecular determinants of chaperone interactions on MHC-I for folding and antigen repertoire selection.
Proc.Natl.Acad.Sci.USA, 116, 2019
8GCG
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BU of 8gcg by Molmil
MDM2 bound to inhibitor
Descriptor: E3 ubiquitin-protein ligase Mdm2, macrocyclic peptide inhibitor
Authors:Silvestri, A.P, Muir, E.W, Chakka, S.K, Tripathi, S.M, Rubin, S.M, Pye, C.R, Schwochert, J.A.
Deposit date:2023-03-01
Release date:2024-10-23
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:DNA-Encoded Macrocyclic Peptide Libraries Enable the Discovery of a Neutral MDM2-p53 Inhibitor.
Acs Med.Chem.Lett., 14, 2023
8GCI
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BU of 8gci by Molmil
Crystal structure of C. elegans LIN-42 PAS-B domain
Descriptor: Period protein homolog lin-42
Authors:Spangler, B.K, Coronado, A.R, Tripathi, S.M, Ward, J.D, Partch, C.L.
Deposit date:2023-03-01
Release date:2023-03-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of C. elegans LIN-42 PAS-B domain
To Be Published

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PDB entries from 2024-10-30

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