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PDB: 13 results

2ND5
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Lysine dimethylated FKBP12
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A
Authors:Hattori, Y, Sebera, J, Sychrovsky, V, Furuita, K, Sugiki, T, Ohki, I, Ikegami, T, Kobayashi, N, Tanaka, Y, Fujiwara, T, Kojima, C.
Deposit date:2016-05-05
Release date:2017-05-17
Method:SOLUTION NMR
Cite:NMR Observation of Protein Surface Salt Bridges at Neutral pH
To be Published
2JUK
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guanidino neomycin B recognition of an HIV-1 RNA helix
Descriptor: (1S,2R,3S,4R,6S)-4,6-bis{[amino(iminio)methyl]amino}-2-{[3-O-(2,6-bis{[amino(iminio)methyl]amino}-2,6-dideoxy-beta-L-glucopyranosyl)-beta-D-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2,6-bis{[amino(iminio)methyl]amino}-2,6-dideoxy-beta-L-glucopyranoside, HIV-1 frameshift site RNA
Authors:Staple, D.W, Venditti, V, Niccolai, N, Elson-Schwab, L, Tor, Y, Butcher, S.E.
Deposit date:2007-08-30
Release date:2007-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Guanidinoneomycin B Recognition of an HIV-1 RNA Helix.
Chembiochem, 9, 2008
1ZX7
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Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative
Descriptor: 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3', 5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3'
Authors:Zhao, Q, Zhao, F, Blount, K.F, Han, Q, Tor, Y, Hermann, T.
Deposit date:2005-06-07
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular recognition of RNA by neomycin and a restricted neomycin derivative
Angew.Chem.Int.Ed.Engl., 44, 2005
1ZZ5
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Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative
Descriptor: 13,15-DIAMINO-2-(AMINOMETHYL)-3,4,9,12-TETRAHYDROXYHEXADECAHYDRO-2H-7,10-EPOXYPYRANO[2,3-B][1,10,4]BENZODIOXAZACYCLODODECIN-8-YL 2,6-DIAMINO-2,6-DIDEOXYHEXOPYRANOSIDE, 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3', 5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', ...
Authors:Zhao, Q, Zhao, F, Blount, K.F, Han, Q, Tor, Y, Hermann, T.
Deposit date:2005-06-13
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular recognition of RNA by neomycin and a restricted neomycin derivative
Angew.Chem.Int.Ed.Engl., 44, 2005
2A04
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Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative
Descriptor: 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3', 5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', MAGNESIUM ION, ...
Authors:Zhao, Q, Zhao, F, Blount, K.F, Han, Q, Tor, Y, Hermann, T.
Deposit date:2005-06-15
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular recognition of RNA by neomycin and a restricted neomycin derivative
Angew.Chem.Int.Ed.Engl., 44, 2005
5IX7
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Crystal structure of metallo-DNA nanowire with infinite one-dimensional silver array
Descriptor: DNA (5'-D(*GP*GP*AP*CP*TP*(CBR)P*GP*AP*CP*TP*CP*C)-3'), POTASSIUM ION, SILVER ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Hattori, Y, Saneyoshi, H, Ono, A, Tanaka, Y.
Deposit date:2016-03-23
Release date:2017-07-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:A metallo-DNA nanowire with uninterrupted one-dimensional silver array
Nat Chem, 9, 2017
1IY8
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Crystal Structure of Levodione Reductase
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, LEVODIONE REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sogabe, S, Fukami, T, Shiratori, Y, Yoshizumi, A, Wada, M.
Deposit date:2002-07-25
Release date:2003-05-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure and Stereospecificity of Levodione Reductase from Corynebacterium aquaticum M-13
J.BIOL.CHEM., 278, 2003
1IYK
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Crystal structure of candida albicans N-myristoyltransferase with myristoyl-COA and peptidic inhibitor
Descriptor: MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, TETRADECANOYL-COA, [CYCLOHEXYLETHYL]-[[[[4-[2-METHYL-1-IMIDAZOLYL-BUTYL]PHENYL]ACETYL]-SERYL]-LYSINYL]-AMINE
Authors:Sogabe, S, Fukami, T.A, Morikami, K, Shiratori, Y, Aoki, Y, D'Arcy, A, Winkler, F.K, Banner, D.W, Ohtsuka, T.
Deposit date:2002-08-29
Release date:2002-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Candida albicans N-Myristoyltransferase with Two Distinct Inhibitors
CHEM.BIOL., 9, 2002
1IYL
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Crystal Structure of Candida albicans N-myristoyltransferase with Non-peptidic Inhibitor
Descriptor: (1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE, Myristoyl-CoA:Protein N-Myristoyltransferase
Authors:Sogabe, S, Fukami, T.A, Morikami, K, Shiratori, Y, Aoki, Y, D'Arcy, A, Winkler, F.K, Banner, D.W, Ohtsuka, T.
Deposit date:2002-08-29
Release date:2002-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structures of Candida albicans N-Myristoyltransferase with Two Distinct Inhibitors
CHEM.BIOL., 9, 2002
3AW0
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Structure of SARS 3CL protease with peptidic aldehyde inhibitor
Descriptor: 3C-Like Proteinase, peptide ACE-SER-ALA-VAL-LEU-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3AW1
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Structure of SARS 3CL protease auto-proteolysis resistant mutant in the absent of inhibitor
Descriptor: 3C-Like Proteinase
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3ATW
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Structure-Based Design, Synthesis, Evaluation of Peptide-mimetic SARS 3CL Protease Inhibitors
Descriptor: 3C-Like Proteinase, peptide ACE-THR-VAL-ALC-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-01-20
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3AVZ
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Structure of SARS 3CL protease with peptidic aldehyde inhibitor containing cyclohexyl side chain
Descriptor: 3C-Like Proteinase, peptide ACE-SER-ALA-VAL-ALC-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011

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