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PDB: 89 results

8FDT
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BU of 8fdt by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FDU
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BU of 8fdu by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, Platelet-activating factor acetylhydrolase IB subunit beta,Platelet-activating factor acetylhydrolase IB subunit beta,human LIS1 protein with a SNAP tag
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FCY
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BU of 8fcy by Molmil
Engineered human dynein motor domain in microtubule-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-01
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FD6
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BU of 8fd6 by Molmil
Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-02
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
5I7J
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BU of 5i7j by Molmil
Crystal Structure of Human SPLUNC1 Disulfide Mutant M3 (I76C, V214C)
Descriptor: BPI fold-containing family A member 1
Authors:Walton, W.G, Redinbo, M.R.
Deposit date:2016-02-17
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.544 Å)
Cite:Structural Features Essential to the Antimicrobial Functions of Human SPLUNC1.
Biochemistry, 55, 2016
5I7K
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BU of 5i7k by Molmil
Crystal Structure of Human SPLUNC1 Dolphin Mutant D1 (G58A, S61A, G62E, G63D, G66D, I67T)
Descriptor: BPI fold-containing family A member 1
Authors:Walton, W.G, Redinbo, M.R.
Deposit date:2016-02-17
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Structural Features Essential to the Antimicrobial Functions of Human SPLUNC1.
Biochemistry, 55, 2016
5I7L
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BU of 5i7l by Molmil
Crystal Structure of SPLUNC1 Disulfide Mutant M2 (A48C, V253C)
Descriptor: BPI fold-containing family A member 1
Authors:Walton, W.G, Redinbo, M.R.
Deposit date:2016-02-17
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Structural Features Essential to the Antimicrobial Functions of Human SPLUNC1.
Biochemistry, 55, 2016
1IIN
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BU of 1iin by Molmil
thymidylyltransferase complexed with UDP-glucose
Descriptor: URIDINE-5'-DIPHOSPHATE-GLUCOSE, glucose-1-phosphate thymidylyltransferase
Authors:Barton, W.A, Lesniak, J, Biggins, J.B, Jeffrey, P.D, Jiang, J, Rajashankar, K.R, Thorson, J.S, Nikolov, D.B.
Deposit date:2001-04-23
Release date:2001-05-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure, mechanism and engineering of a nucleotidylyltransferase as a first step toward glycorandomization.
Nat.Struct.Biol., 8, 2001
1IIM
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BU of 1iim by Molmil
thymidylyltransferase complexed with TTP
Descriptor: THYMIDINE-5'-TRIPHOSPHATE, glucose-1-phosphate thymidylyltransferase
Authors:Barton, W.A, Lesniak, J, Biggins, J.B, Jeffrey, P.D, Jiang, J, Rajashankar, K.R, Thorson, J.S, Nikolov, D.B.
Deposit date:2001-04-23
Release date:2001-05-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure, mechanism and engineering of a nucleotidylyltransferase as a first step toward glycorandomization.
Nat.Struct.Biol., 8, 2001
6NCX
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BU of 6ncx by Molmil
Crystal structure of GH2 beta-galacturonidase from Eisenbergiella tayi bound to galacturonate
Descriptor: Beta-galacturonidase, CHLORIDE ION, alpha-D-galactopyranuronic acid
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6P2B
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BU of 6p2b by Molmil
Tethered PXR-LBD/SRC-1p bound to Garcinoic Acid
Descriptor: (2Z,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydro-2H-1-benzopyran-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid, DIMETHYL SULFOXIDE, Nuclear receptor subfamily 1 group I member 2
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2019-05-21
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Garcinoic Acid Is a Natural and Selective Agonist of Pregnane X Receptor.
J.Med.Chem., 63, 2020
6D89
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BU of 6d89 by Molmil
Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, CITRIC ACID
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D1N
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BU of 6d1n by Molmil
Apo structure of Bacteroides uniformis Beta-glucuronidase 1
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-12
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
5UJ6
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BU of 5uj6 by Molmil
Crystal Structure of Bacteroides Uniformis beta-glucuronidase
Descriptor: CALCIUM ION, GLYCEROL, Glycosyl hydrolases family 2, ...
Authors:Walton, W.G, Redinbo, M.R.
Deposit date:2017-01-17
Release date:2017-06-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An Atlas of beta-Glucuronidases in the Human Intestinal Microbiome.
Structure, 25, 2017
6D1P
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BU of 6d1p by Molmil
Apo structure of Bacteroides uniformis beta-glucuronidase 3
Descriptor: GLYCEROL, Glycosyl hydrolases family 2, sugar binding domain protein, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-12
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D41
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BU of 6d41 by Molmil
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-17
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D50
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BU of 6d50 by Molmil
Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, CALCIUM ION, Glycosyl hydrolases family 2, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-19
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6NCZ
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BU of 6ncz by Molmil
Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans bound to phenyl-thio-beta-D-glucuronide
Descriptor: Beta-glucuronidase, GLYCEROL, phenyl 1-thio-beta-D-glucopyranosiduronic acid
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6NCY
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BU of 6ncy by Molmil
Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans
Descriptor: Beta-glucuronidase, GLYCEROL, NICKEL (II) ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6D7F
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BU of 6d7f by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-24
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D6W
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BU of 6d6w by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-23
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
8DTQ
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BU of 8dtq by Molmil
Crystal Structure of Staphylococcus aureus pSK41 Cop
Descriptor: CHLORIDE ION, Helix-turn-helix domain, SODIUM ION
Authors:Walton, W.G, Eakes, T.C, Redinbo, M.R, McLaughlin, K.J.
Deposit date:2022-07-26
Release date:2023-08-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:pSK41/pGO1-family conjugative plasmids of Staphylococcus aureus encode a cryptic repressor of replication.
Plasmid, 128, 2023
6NCW
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BU of 6ncw by Molmil
Crystal structure of a GH2 beta-galacturonidase from Eisenbergiella tayi bound to glycerol
Descriptor: Beta-galacturonidase, CHLORIDE ION, GLYCEROL
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6D8K
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BU of 6d8k by Molmil
Bacteroides multiple species beta-glucuronidase
Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
5GTT
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BU of 5gtt by Molmil
Crystal structure of C. perfringens iota-like enterotoxin CPILE-a
Descriptor: 1,2-ETHANEDIOL, Binary enterotoxin of Clostridium perfringens component a
Authors:Toniti, W, Yoshida, T, Tsurumura, T, Irikura, D, Tsuge, H.
Deposit date:2016-08-23
Release date:2017-03-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Crystal structure and structure-based mutagenesis of actin-specific ADP-ribosylating toxin CPILE-a as novel enterotoxin
PLoS ONE, 12, 2017

 

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