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PDB: 437 件

1XKD
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Ternary complex of Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix
分子名称: CALCIUM ION, ISOCITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Karlstrom, M, Stokke, R, Steen, I.H, Birkeland, N.-K, Ladenstein, R.
登録日2004-09-28
公開日2005-10-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix: X-ray structure analysis of a ternary enzyme-substrate complex and thermal stability.
J.Mol.Biol., 345, 2005
1GMY
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BU of 1gmy by Molmil
Cathepsin B complexed with dipeptidyl nitrile inhibitor
分子名称: 2-AMINOETHANIMIDIC ACID, 3-METHYLPHENYLALANINE, CATHEPSIN B, ...
著者Greenspan, P.D, Clark, K.L, Tommasi, R.A, Cowen, S.D, McQuire, L.W, Farley, D.L, van Duzer, J.H, Goldberg, R.L, Zhou, H, Du, Z, Fitt, J.J, Coppa, D.E, Fang, Z, Macchia, W, Zhu, L, Capparelli, M.P, Goldstein, R, Wigg, A.M, Doughty, J.R, Bohacek, R.S, Knap, A.K.
登録日2001-09-25
公開日2002-09-19
最終更新日2017-07-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of Dipeptidyl Nitriles as Potent and Selective Inhibitors of Cathepsin B Through Structure-Based Drug Design
J.Med.Chem., 44, 2001
7LIW
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BU of 7liw by Molmil
Local refinement of human ATP citrate lyase E599Q mutant ASH domain
分子名称: (2S)-2-hydroxy-2-[2-oxo-2-(phosphonooxy)ethyl]butanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, ...
著者Wei, X, Marmorstein, R.
登録日2021-01-28
公開日2021-05-19
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Reply to: Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
4GS4
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BU of 4gs4 by Molmil
Structure of the alpha-tubulin acetyltransferase, alpha-TAT1
分子名称: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase
著者Friedmann, D.R, Fan, J, Marmorstein, R.
登録日2012-08-27
公開日2012-10-17
最終更新日2013-08-28
実験手法X-RAY DIFFRACTION (2.112 Å)
主引用文献Structure of the alpha-tubulin acetyltransferase, alpha TAT1, and implications for tubulin-specific acetylation.
Proc.Natl.Acad.Sci.USA, 109, 2012
7LLA
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BU of 7lla by Molmil
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate (EM map was generated in Cryosparc with non-uniform refinement)
分子名称: ACETYL COENZYME *A, ATP-citrate synthase, OXALOACETATE ION
著者Wei, X, Marmorstein, R.
登録日2021-02-03
公開日2021-03-03
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Reply to: Acetyl-CoA is produced by the citrate synthase homology module of ATP-citrate lyase.
Nat.Struct.Mol.Biol., 28, 2021
3N5U
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BU of 3n5u by Molmil
Crystal structure of an Rb C-terminal peptide bound to the catalytic subunit of PP1
分子名称: CHLORIDE ION, MANGANESE (II) ION, Retinoblastoma-associated protein, ...
著者Hirschi, A.M, Cecchini, M, Steinhardt, R.C, Dick, F.A, Rubin, S.M.
登録日2010-05-25
公開日2010-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein.
Nat.Struct.Mol.Biol., 17, 2010
4K2J
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BU of 4k2j by Molmil
Decameric ring structure of KSHV (HHV-8) latency-associated nuclear antigen (LANA) DNA binding domain
分子名称: CHLORIDE ION, FORMIC ACID, KSHV (HHV-8) latency-associated nuclear antigen (LANA)
著者Domsic, J.F, Marmorstein, R.
登録日2013-04-09
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Molecular Basis for Oligomeric-DNA Binding and Episome Maintenance by KSHV LANA.
Plos Pathog., 9, 2013
1ZOR
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BU of 1zor by Molmil
Isocitrate dehydrogenase from the hyperthermophile Thermotoga maritima
分子名称: SODIUM ION, isocitrate dehydrogenase
著者Karlstrom, M, Steen, I.H, Birkeland, N.-K, Ladenstein, R.
登録日2005-05-13
公開日2006-05-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献The crystal structure of a hyperthermostable subfamily II isocitrate dehydrogenase from Thermotoga maritima.
Febs J., 273, 2006
7RZD
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BU of 7rzd by Molmil
CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE
分子名称: Beta-2-microglobulin, CHLORIDE ION, GLYCEROL, ...
著者Patskovsky, Y, Patskovska, L, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
登録日2021-08-27
公開日2022-11-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
1YK5
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BU of 1yk5 by Molmil
Pyrococcus abyssi rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Bonisch, H, Schmidt, C.L, Bianco, P, Ladenstein, R.
登録日2005-01-17
公開日2006-01-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin. I. 0.69 A X-ray structure of mutant W4L/R5S.
Acta Crystallogr.,Sect.D, 61, 2005
2PHE
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BU of 2phe by Molmil
Model for VP16 binding to PC4
分子名称: Alpha trans-inducing protein, TRANSCRIPTIONAL COACTIVATOR PC4
著者Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R.
登録日2007-04-11
公開日2007-04-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005
4DAW
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BU of 4daw by Molmil
Crystal structure of PAK1 kinase domain with the ruthenium phthalimide complex
分子名称: Serine/threonine-protein kinase PAK 1, [1,3-dioxo-6-(pyridin-2-yl-kappaN)-2,3-dihydro-1H-isoindol-5-yl-kappaC~5~][(thioxomethylidene)azanido-kappaN](1,4,7-trithionane-kappa~3~S~1~,S~4~,S~7~)ruthenium
著者Maksimoska, J, Marmorstein, R.
登録日2012-01-13
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The art of filling protein pockets efficiently with octahedral metal complexes.
Angew.Chem.Int.Ed.Engl., 51, 2012
5DFP
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BU of 5dfp by Molmil
Crystal structure of PAK1 in complex with an inhibitor compound FRAX1036
分子名称: 6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-8-ethyl-2-{[2-(1-methylpiperidin-4-yl)ethyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, DIMETHYL SULFOXIDE, Serine/threonine-protein kinase PAK 1
著者Maksimoska, J, Marmorstein, R, Wang, W.
登録日2015-08-27
公開日2016-01-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Design of Selective PAK1 Inhibitor G-5555: Improving Properties by Employing an Unorthodox Low-pK a Polar Moiety.
Acs Med.Chem.Lett., 6, 2015
3Q35
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BU of 3q35 by Molmil
Structure of the Rtt109-AcCoA/Vps75 complex and implications for chaperone-mediated histone acetylation
分子名称: 1,2-ETHANEDIOL, ACETYL COENZYME *A, Histone acetyltransferase, ...
著者Tang, Y, Yuan, H, Meeth, K, Marmorstein, R.
登録日2010-12-21
公開日2011-02-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the Rtt109-AcCoA/Vps75 Complex and Implications for Chaperone-Mediated Histone Acetylation.
Structure, 19, 2011
7L1K
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BU of 7l1k by Molmil
Cryo-EM structure of S. Pombe NatC complex with a Bisubstrate inhibitor and inositol hexaphosphate
分子名称: CARBOXYMETHYL COENZYME *A, INOSITOL HEXAKISPHOSPHATE, MLGP peptide, ...
著者Deng, S, Marmorstein, R.
登録日2020-12-14
公開日2021-05-12
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Molecular mechanism of N-terminal acetylation by the ternary NatC complex.
Structure, 29, 2021
4EQC
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BU of 4eqc by Molmil
Crystal structure of PAK1 kinase domain in complex with FRAX597 inhibitor
分子名称: 6-[2-chloro-4-(1,3-thiazol-5-yl)phenyl]-8-ethyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, CHLORIDE ION, Serine/threonine-protein kinase PAK 1
著者Maksimoska, J, Marmorstein, R.
登録日2012-04-18
公開日2013-08-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献FRAX597, a Small Molecule Inhibitor of the p21-activated Kinases, Inhibits Tumorigenesis of Neurofibromatosis Type 2 (NF2)-associated Schwannomas.
J.Biol.Chem., 288, 2013
2PHG
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BU of 2phg by Molmil
Model for VP16 binding to TFIIB
分子名称: Alpha trans-inducing protein, Transcription initiation factor IIB
著者Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R.
登録日2007-04-11
公開日2007-04-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005
3Q33
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BU of 3q33 by Molmil
Structure of the Rtt109-AcCoA/Vps75 Complex and Implications for Chaperone-Mediated Histone Acetylation
分子名称: 1,2-ETHANEDIOL, ACETYL COENZYME *A, HISTONE H3, ...
著者Tang, Y, Yuan, H, Meeth, K, Marmorstein, R.
登録日2010-12-21
公開日2011-02-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Rtt109-AcCoA/Vps75 Complex and Implications for Chaperone-Mediated Histone Acetylation.
Structure, 19, 2011
2P4W
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BU of 2p4w by Molmil
Crystal structure of heat shock regulator from Pyrococcus furiosus
分子名称: SULFATE ION, Transcriptional regulatory protein arsR family
著者Liu, W, Vierke, G, Panjikar, S, Thomm, M, Ladenstein, R.
登録日2007-03-13
公開日2007-03-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the Archaeal Heat Shock Regulator from Pyrococcus furiosus: A Molecular Chimera Representing Eukaryal and Bacterial Features.
J.Mol.Biol., 369, 2007
2QIY
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BU of 2qiy by Molmil
yeast Deubiquitinase Ubp3 and Bre5 cofactor complex
分子名称: UBP3-associated protein BRE5, Ubiquitin carboxyl-terminal hydrolase 3
著者Li, K, Liu, X, Marmorstein, R.
登録日2007-07-05
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular basis for bre5 cofactor recognition by the ubp3 deubiquitylating enzyme.
J.Mol.Biol., 372, 2007
2R7G
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BU of 2r7g by Molmil
Structure of the retinoblastoma protein pocket domain in complex with adenovirus E1A CR1 domain
分子名称: Early E1A 32 kDa protein, Retinoblastoma-associated protein, SULFATE ION
著者Liu, X, Marmorstein, R.
登録日2007-09-07
公開日2007-10-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.671 Å)
主引用文献Structure of the retinoblastoma protein bound to adenovirus E1A reveals the molecular basis for viral oncoprotein inactivation of a tumor suppressor
Genes Dev., 21, 2007
2VL6
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BU of 2vl6 by Molmil
STRUCTURAL ANALYSIS OF THE SULFOLOBUS SOLFATARICUS MCM PROTEIN N- TERMINAL DOMAIN
分子名称: MINICHROMOSOME MAINTENANCE PROTEIN MCM, ZINC ION
著者Liu, W, Pucci, B, Rossi, M, Pisani, F.M, Ladenstein, R.
登録日2008-01-08
公開日2008-04-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Analysis of the Sulfolobus Solfataricus Mcm Protein N-Terminal Domain.
Nucleic Acids Res., 36, 2008
3IOQ
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BU of 3ioq by Molmil
Crystal structure of the Carica candamarcensis cysteine protease CMS1MS2 in complex with E-64.
分子名称: 1,2-ETHANEDIOL, CMS1MS2, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, ...
著者Gomes, M.T.R, Teixeira, R.D, Salas, C.E, Nagem, R.A.P.
登録日2009-08-14
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of the Carica candamarcensis cysteine protease CMS1MS2 in complex with E-64
To be Published
1WCO
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BU of 1wco by Molmil
The solution structure of the nisin-lipid II complex
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, ALA-FGA-LYS-DAL-DAL PEPTIDE, ...
著者Hsu, S.-T.D, Breukink, E, Tischenko, E, Lutters, M.A.G, de Kruijff, B, Kaptein, R, Bonvin, A.M.J.J, van Nuland, N.A.J.
登録日2004-11-19
公開日2005-03-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The nisin-lipid II complex reveals a pyrophosphate cage that provides a blueprint for novel antibiotics.
Nat. Struct. Mol. Biol., 11, 2004
2VLD
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BU of 2vld by Molmil
crystal structure of a repair endonuclease from Pyrococcus abyssi
分子名称: Endonuclease NucS
著者Ren, B, Kuhn, J, Meslet-Cladiere, L, Briffotaux, J, Norais, C, Lavigne, R, Flament, D, Ladenstein, R, Myllykallio, H.
登録日2008-01-14
公開日2009-05-19
最終更新日2018-09-26
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of a novel endonuclease acting on branched DNA substrates.
EMBO J., 28, 2009

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