3AOU
| Structure of the Na+ unbound rotor ring modified with N,N f-Dicyclohexylcarbodiimide of the Na+-transporting V-ATPase | 分子名称: | DICYCLOHEXYLUREA, UNDECYL-MALTOSIDE, V-type sodium ATPase subunit K | 著者 | Mizutani, K, Yamamoto, M, Yamato, I, Kakinuma, Y, Shirouzu, M, Yokoyama, S, Iwata, S, Murata, T. | 登録日 | 2010-10-06 | 公開日 | 2011-08-17 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.14 Å) | 主引用文献 | Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase. Proc.Natl.Acad.Sci.USA, 108, 2011
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1IEJ
| OVOTRANSFERRIN, N-TERMINAL LOBE, HOLO FORM, AT 1.65 A RESOLUTION | 分子名称: | CARBONATE ION, FE (III) ION, OVOTRANSFERRIN | 著者 | Mizutani, K, Mikami, B, Hirose, M. | 登録日 | 2001-04-10 | 公開日 | 2001-06-20 | 最終更新日 | 2017-10-04 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Domain closure mechanism in transferrins: new viewpoints about the hinge structure and motion as deduced from high resolution crystal structures of ovotransferrin N-lobe. J.Mol.Biol., 309, 2001
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3VM5
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2D3I
| Crystal Structure of Aluminum-Bound Ovotransferrin at 2.15 Angstrom Resolution | 分子名称: | ALUMINUM ION, BICARBONATE ION, Ovotransferrin | 著者 | Mizutani, K, Mikami, B, Aibara, S, Hirose, M. | 登録日 | 2005-09-28 | 公開日 | 2005-11-29 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Structure of aluminium-bound ovotransferrin at 2.15 Angstroms resolution. Acta Crystallogr.,Sect.D, 61, 2005
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4UX1
| Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF) | 分子名称: | POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA | 著者 | Abe, K, Tani, K, Fujiyoshi, Y. | 登録日 | 2014-08-18 | 公開日 | 2014-09-17 | 最終更新日 | 2014-11-12 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (8 Å) | 主引用文献 | Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating. J.Biol.Chem., 289, 2014
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4UX2
| Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. MgF) | 分子名称: | POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA | 著者 | Abe, K, Tani, K, Fujiyoshi, Y. | 登録日 | 2014-08-18 | 公開日 | 2014-09-17 | 最終更新日 | 2014-11-12 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (7 Å) | 主引用文献 | Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating. J.Biol.Chem., 289, 2014
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4P79
| Crystal structure of mouse claudin-15 | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Claudin-15 | 著者 | Suzuki, H, Nishizawa, T, Tani, K, Yamazaki, Y, Tamura, A, Ishitani, R, Dohmae, N, Tsukita, S, Nureki, O, Fujiyoshi, Y. | 登録日 | 2014-03-26 | 公開日 | 2014-04-30 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of a claudin provides insight into the architecture of tight junctions. Science, 344, 2014
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4BGN
| cryo-EM structure of the NavCt voltage-gated sodium channel | 分子名称: | VOLTAGE-GATED SODIUM CHANNEL | 著者 | Tsai, C.J, Tani, K, Irie, K, Hiroaki, Y, Shimomura, T, Mcmillan, D.G, Cook, G.M, Schertler, G, Fujiyoshi, Y, Li, X.D. | 登録日 | 2013-03-28 | 公開日 | 2013-07-10 | 最終更新日 | 2023-12-20 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (9 Å) | 主引用文献 | Two Alternative Conformations of a Voltage-Gated Sodium Channel. J.Mol.Biol., 425, 2013
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1BM1
| CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN THE LIGHT-ADAPTED STATE | 分子名称: | BACTERIORHODOPSIN, PHOSPHORIC ACID 2,3-BIS-(3,7,11,15-TETRAMETHYL-HEXADECYLOXY)-PROPYL ESTER 2-HYDROXO-3-PHOSPHONOOXY-PROPYL ESTER, RETINAL | 著者 | Sato, H, Takeda, K, Tani, K, Hino, T, Okada, T, Nakasako, M, Kamiya, N, Kouyama, T. | 登録日 | 1998-07-28 | 公開日 | 1999-04-27 | 最終更新日 | 2023-08-02 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | Specific lipid-protein interactions in a novel honeycomb lattice structure of bacteriorhodopsin. Acta Crystallogr.,Sect.D, 55, 1999
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6ACF
| structure of leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM | 分子名称: | Leucine dehydrogenase | 著者 | Yamaguchi, H, Kamegawa, A, Nakata, K, Kashiwagi, T, Mizukoshi, T, Fujiyoshi, Y, Tani, K. | 登録日 | 2018-07-26 | 公開日 | 2018-12-26 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | Structural insights into thermostabilization of leucine dehydrogenase from its atomic structure by cryo-electron microscopy J. Struct. Biol., 205, 2019
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6ACH
| Structure of NAD+-bound leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM | 分子名称: | Leucine dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Yamaguchi, H, Kamegawa, A, Nakata, K, Kashiwagi, T, Mizukoshi, T, Fujiyoshi, Y, Tani, K. | 登録日 | 2018-07-26 | 公開日 | 2018-12-26 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | Structural insights into thermostabilization of leucine dehydrogenase from its atomic structure by cryo-electron microscopy J. Struct. Biol., 205, 2019
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2XZB
| Pig Gastric H,K-ATPase with bound BeF and SCH28080 | 分子名称: | POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA | 著者 | Abe, K, Tani, K, Fujiyoshi, Y. | 登録日 | 2010-11-24 | 公開日 | 2011-01-26 | 最終更新日 | 2020-09-16 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (7 Å) | 主引用文献 | Conformational Rearrangement of Gastric H(+),K(+)- ATPase Induced by an Acid Suppressant. Nat.Commun., 2, 2011
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3IXZ
| Pig gastric H+/K+-ATPase complexed with aluminium fluoride | 分子名称: | Potassium-transporting ATPase alpha, Potassium-transporting ATPase subunit beta | 著者 | Abe, K, Tani, K, Nishizawa, T, Fujiyoshi, Y. | 登録日 | 2009-03-09 | 公開日 | 2009-06-23 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (6.5 Å) | 主引用文献 | Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle Embo J., 28, 2009
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3IYZ
| Structure of Aquaporin-4 S180D mutant at 10.0 A resolution from electron micrograph | 分子名称: | Aquaporin-4 | 著者 | Mitsuma, T, Tani, K, Hiroaki, Y, Kamegawa, A, Suzuki, H, Hibino, H, Kurachi, Y, Fujiyoshi, Y. | 登録日 | 2010-07-24 | 公開日 | 2010-08-25 | 最終更新日 | 2023-09-06 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (10 Å) | 主引用文献 | Influence of the cytoplasmic domains of aquaporin-4 on water conduction and array formation. J.Mol.Biol., 402, 2010
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3IZ1
| C-alpha model fitted into the EM structure of Cx26M34A | 分子名称: | Gap junction beta-2 protein | 著者 | Oshima, A, Tani, K, Toloue, M.M, Hiroaki, Y, Smock, A, Inukai, S, Cone, A, Nicholson, B.J, Sosinsky, G.E, Fujiyoshi, Y. | 登録日 | 2010-08-19 | 公開日 | 2010-11-03 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (6 Å) | 主引用文献 | Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels. J.Mol.Biol., 405, 2011
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3IZ2
| C-alpha model fitted into the EM structure of Cx26M34Adel2-7 | 分子名称: | Gap junction beta-2 protein | 著者 | Oshima, A, Tani, K, Toloue, M.M, Hiroaki, Y, Smock, A, Inukai, S, Cone, A, Nicholson, B.J, Sosinsky, G.E, Fujiyoshi, Y. | 登録日 | 2010-08-19 | 公開日 | 2010-11-03 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (10 Å) | 主引用文献 | Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels. J.Mol.Biol., 405, 2011
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1V9J
| Solution structure of a BolA-like protein from Mus musculus | 分子名称: | BolA-like protein RIKEN cDNA 1110025L05 | 著者 | Kasai, T, Inoue, M, Koshiba, S, Yabuki, T, Aoki, M, Nunokawa, E, Seki, E, Matsuda, T, Matsuda, N, Tomo, Y, Shirouzu, M, Terada, T, Obayashi, N, Hamana, H, Shinya, N, Tatsuguchi, A, Yasuda, S, Yoshida, M, Hirota, H, Matsuo, Y, Tani, K, Suzuki, H, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-01-26 | 公開日 | 2004-02-10 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a BolA-like protein from Mus musculus Protein Sci., 13, 2004
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7WSV
| Cryo-EM structure of the N-terminal deletion mutant of human pannexin-1 in a nanodisc | 分子名称: | Pannexin-1 | 著者 | Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A. | 登録日 | 2022-02-01 | 公開日 | 2022-02-16 | 最終更新日 | 2022-02-23 | 実験手法 | ELECTRON MICROSCOPY (4.5 Å) | 主引用文献 | Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids. Sci.Signal., 15, 2022
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2D57
| Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography | 分子名称: | Aquaporin-4 | 著者 | Hiroaki, Y, Tani, K, Kamegawa, A, Gyobu, N, Nishikawa, K, Suzuki, H, Walz, T, Sasaki, S, Mitsuoka, K, Kimura, K, Mizoguchi, A, Fujiyoshi, Y. | 登録日 | 2005-10-29 | 公開日 | 2006-01-31 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON CRYSTALLOGRAPHY (3.2 Å) | 主引用文献 | Implications of the Aquaporin-4 Structure on Array Formation and Cell Adhesion J.Mol.Biol., 355, 2005
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7EBC
| Crystal structure of Isocitrate lyase-1 from Saccaromyces cervisiae | 分子名称: | Isocitrate lyase, MAGNESIUM ION, TETRAETHYLENE GLYCOL | 著者 | Hiragi, K, Nishio, K, Moriyama, S, Hamaguchi, T, Mizoguchi, A, Yonekura, K, Tani, K, Mizushima, T. | 登録日 | 2021-03-09 | 公開日 | 2021-06-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural insights into the targeting specificity of ubiquitin ligase for S. cerevisiae isocitrate lyase but not C. albicans isocitrate lyase. J.Struct.Biol., 213, 2021
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7EBE
| Crystal structure of Isocitrate lyase-1 from Candida albicans | 分子名称: | FORMIC ACID, Isocitrate lyase, MAGNESIUM ION | 著者 | Hiragi, K, Nishio, K, Moriyama, S, Hamaguchi, T, Mizoguchi, A, Yonekura, K, Tani, K, Mizushima, T. | 登録日 | 2021-03-09 | 公開日 | 2021-06-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.69 Å) | 主引用文献 | Structural insights into the targeting specificity of ubiquitin ligase for S. cerevisiae isocitrate lyase but not C. albicans isocitrate lyase. J.Struct.Biol., 213, 2021
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7EBF
| Cryo-EM structure of Isocitrate lyase-1 from Candida albicans | 分子名称: | Isocitrate lyase | 著者 | Hiragi, K, Nishio, K, Moriyama, S, Hamaguchi, T, Mizoguchi, A, Yonekura, K, Tani, K, Mizushima, T. | 登録日 | 2021-03-09 | 公開日 | 2021-06-23 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (2.63 Å) | 主引用文献 | Structural insights into the targeting specificity of ubiquitin ligase for S. cerevisiae isocitrate lyase but not C. albicans isocitrate lyase. J.Struct.Biol., 213, 2021
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7F8J
| Cryo-EM structure of human pannexin-1 in a nanodisc | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1 | 著者 | Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A. | 登録日 | 2021-07-02 | 公開日 | 2022-01-26 | 最終更新日 | 2022-02-23 | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | 主引用文献 | Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids. Sci.Signal., 15, 2022
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7F8O
| Cryo-EM structure of the C-terminal deletion mutant of human PANX1 in a nanodisc | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1 | 著者 | Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A. | 登録日 | 2021-07-02 | 公開日 | 2022-01-26 | 最終更新日 | 2022-02-23 | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | 主引用文献 | Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids. Sci.Signal., 15, 2022
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7F8N
| Human pannexin-1 showing a conformational change in the N-terminal domain and blocked pore | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Pannexin-1 | 著者 | Kuzuya, M, Hirano, H, Hayashida, K, Watanabe, M, Kobayashi, K, Tani, K, Fujiyoshi, Y, Oshima, A. | 登録日 | 2021-07-02 | 公開日 | 2022-01-26 | 最終更新日 | 2022-02-23 | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | 主引用文献 | Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids. Sci.Signal., 15, 2022
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