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PDB: 485 件

7KZ5
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Crystal structure of KabA from Bacillus cereus UW85 in complex with the plp external aldimine adduct with kanosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 3-deoxy-3-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-6-O-phosphono-alpha-D-gluco pyranose, Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, ...
著者Prasertanan, T, Palmer, D.R.J, Sanders, D.A.R.
登録日2020-12-10
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Snapshots along the catalytic path of KabA, a PLP-dependent aminotransferase required for kanosamine biosynthesis in Bacillus cereus UW85.
J.Struct.Biol., 213, 2021
7KZD
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Crystal structure of KabA from Bacillus cereus UW85 in complex with the reduced internal aldimine and with bound Glutarate
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 1,2-ETHANEDIOL, Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, ...
著者Prasertanan, T, Palmer, D.R.J, Sanders, D.A.R.
登録日2020-12-10
公開日2021-05-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Snapshots along the catalytic path of KabA, a PLP-dependent aminotransferase required for kanosamine biosynthesis in Bacillus cereus UW85.
J.Struct.Biol., 213, 2021
7CNL
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Crystal structure of TEAD3 in complex with VT105
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, N-[(1S)-1-pyridin-2-ylethyl]-8-[4-(trifluoromethyl)phenyl]quinoline-3-carboxamide, ...
著者Tang, T.T, Konradi, A.W.
登録日2020-08-01
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Small Molecule Inhibitors of TEAD Auto-palmitoylation Selectively Inhibit Proliferation and Tumor Growth of NF2 -deficient Mesothelioma.
Mol.Cancer Ther., 20, 2021
7CLJ
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BU of 7clj by Molmil
Crystal structure of Thermoplasmatales archaeon heliorhodopsin E108D mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, RETINAL, SULFATE ION, ...
著者Tanaka, T, Shihoya, W, Yamashita, K, Nureki, O.
登録日2020-07-21
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for unique color tuning mechanism in heliorhodopsin.
Biochem.Biophys.Res.Commun., 533, 2020
5ZCZ
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BU of 5zcz by Molmil
Solution structure of the T. Thermophilus HB8 TTHA1718 protein in living eukaryotic cells by in-cell NMR spectroscopy
分子名称: Heavy metal binding protein
著者Tanaka, T, Teppei, I, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
登録日2018-02-22
公開日2019-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
5ZD0
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Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy
分子名称: ubiquitin
著者Tanaka, T, Ikeya, T, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
登録日2018-02-22
公開日2019-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
5Z4B
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GB1 structure determination in living eukaryotic cells by in-cell NMR spectroscopy
分子名称: Protein LG
著者Tanaka, T, Teppei, I, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
登録日2018-01-10
公開日2019-01-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
7DDZ
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BU of 7ddz by Molmil
The Crystal Structure of Human Neuropeptide Y Y2 Receptor with JNJ-31020028
分子名称: FLAVIN MONONUCLEOTIDE, Human Neuropeptide Y Y2 Receptor fusion protein, ~{N}-[4-[4-[(1~{S})-2-(diethylamino)-2-oxidanylidene-1-phenyl-ethyl]piperazin-1-yl]-3-fluoranyl-phenyl]-2-pyridin-3-yl-benzamide
著者Tang, T, Han, S, Zhao, Q, Wu, B.
登録日2020-10-30
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for ligand recognition of the neuropeptide Y Y 2 receptor.
Nat Commun, 12, 2021
1KOT
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Solution Structure of Human GABA Receptor Associated Protein GABARAP
分子名称: GABARAP
著者Stangler, T, Luge, C, Mayr, L.M, Willbold, D.
登録日2001-12-22
公開日2002-01-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of human GABA(A) receptor-associated protein GABARAP: implications for biolgoical funcrion and its regulation.
J.Biol.Chem., 277, 2002
2ZWI
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Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, Photobacterium phosphoreum
分子名称: Alpha-/beta-galactoside alpha-2,3-sialyltransferase, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Iwatani, T, Okino, N, Sakakura, M, Kajiwara, H, Ichikawa, M, Takakura, Y, Kimura, M, Ito, M, Yamamoto, T, Kakuta, Y.
登録日2008-12-05
公開日2009-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of alpha/beta-galactoside alpha2,3-sialyltransferase from a luminous marine bacterium, Photobacterium phosphoreum
Febs Lett., 583, 2009
5DMQ
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BU of 5dmq by Molmil
Crystal structure of mouse eRF1 in complex with Reverse Transcriptase (RT) of Moloney Murine Leukemia Virus
分子名称: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
著者Tang, T, Song, H.
登録日2015-09-09
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
7CCN
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The binding structure of a lanthanide binding tag (LBT3) with lutetium ion (Lu3+)
分子名称: LBT3, LUTETIUM (III) ION
著者Hatanaka, T, Kikkawa, N, Matsugami, A, Hosokawa, Y, Hayashi, F, Ishida, N.
登録日2020-06-17
公開日2021-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The origins of binding specificity of a lanthanide ion binding peptide.
Sci Rep, 10, 2020
7CCO
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BU of 7cco by Molmil
The binding structure of a lanthanide binding tag (LBT3) with lanthanum ion (La3+)
分子名称: LANTHANUM (III) ION, LBT3
著者Hatanaka, T, Kikkawa, N, Matsugami, A, Hosokawa, Y, Hayashi, F, Ishida, N.
登録日2020-06-17
公開日2021-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The origins of binding specificity of a lanthanide ion binding peptide.
Sci Rep, 10, 2020
3LSH
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BU of 3lsh by Molmil
Pyranose 2-oxidase T169A, monoclinic
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Pyranose 2-oxidase
著者Divne, C, Tan, T.C, Spadiut, O.
登録日2010-02-12
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献H-bonding and positive charge at the N5/O4 locus are critical for covalent flavin attachment in trametes pyranose 2-oxidase.
J.Mol.Biol., 402, 2010
4X68
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BU of 4x68 by Molmil
Crystal Structure of OP0595 complexed with AmpC
分子名称: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, NICKEL (II) ION
著者Yamada, M, Watanabe, T.
登録日2014-12-07
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
6G7K
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BU of 6g7k by Molmil
Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 10 ps state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, ...
著者Nogly, P, Weinert, T, James, D, Cabajo, S, Ozerov, D, Furrer, A, Gashi, D, Borin, V, Skopintsev, P, Jaeger, K, Nass, K, Bath, P, Bosman, R, Koglin, J, Seaberg, M, Lane, T, Kekilli, D, Bruenle, S, Tanaka, T, Wu, W, Milne, C, White, T, Barty, A, Weierstall, U, Panneels, V, Nango, E, Iwata, S, Hunter, M, Schapiro, I, Schertler, G, Neutze, R, Standfuss, J.
登録日2018-04-06
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.
Science, 361, 2018
6TBR
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BU of 6tbr by Molmil
Glycosylated AA13 Lytic polysaccharide monooxygenase from Aspergillus oryzae in P1 space group
分子名称: AoAA13, ZINC ION
著者Frandsen, K.E.H, Muderspach, S.J, Tandrup, T, Poulsen, J.C.N, Lo Leggio, L.
登録日2019-11-04
公開日2020-03-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Further structural studies of the lytic polysaccharide monooxygenase AoAA13 belonging to the starch-active AA13 family
Amylase, 3(1), 2019
6TFO
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Crystal structure of as isolated three-domain copper-containing nitrite reductase from Hyphomicrobium denitrificans strain 1NES1
分子名称: COPPER (II) ION, Copper-containing nitrite reductase
著者Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
登録日2019-11-14
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of substrate- and product-bound forms of a multi-domain copper nitrite reductase shed light on the role of domain tethering in protein complexes.
Iucrj, 7, 2020
7X5C
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BU of 7x5c by Molmil
Solution structure of Tetrahymena p75OB1-p50PBM
分子名称: Telomerase associated protein p50PBM, Telomerase-associated protein p75OB1
著者Wu, B, Tang, T, Xue, H.J, Wu, J, Lei, M.
登録日2022-03-04
公開日2022-10-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Association of the CST complex and p50 in Tetrahymena is crucial for telomere maintenance
Structure, 2022
6NBF
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Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
分子名称: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
登録日2018-12-07
公開日2019-04-17
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
5MM0
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Dolichyl phosphate mannose synthase in complex with GDP-mannose and Mn2+ (donor complex)
分子名称: CHLORIDE ION, Dolichol monophosphate mannose synthase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, ...
著者Gandini, R, Reichenbach, T, Tan, T.C, Divne, C.
登録日2016-12-08
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for dolichylphosphate mannose biosynthesis.
Nat Commun, 8, 2017
5MLZ
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Dolichyl phosphate mannose synthase in complex with GDP and Mg2+
分子名称: CHLORIDE ION, Dolichol monophosphate mannose synthase, GUANOSINE-5'-DIPHOSPHATE, ...
著者Gandini, R, Reichenbach, T, Tan, T.C, Divne, C.
登録日2016-12-08
公開日2017-08-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for dolichylphosphate mannose biosynthesis.
Nat Commun, 8, 2017
5MM1
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Dolichyl phosphate mannose synthase in complex with GDP and dolichyl phosphate mannose
分子名称: Dolichol monophosphate mannose synthase, GUANOSINE-5'-DIPHOSPHATE, dolichyl phosphate mannose
著者Gandini, R, Reichenbach, T, Tan, T.C, Divne, C.
登録日2016-12-08
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for dolichylphosphate mannose biosynthesis.
Nat Commun, 8, 2017
3J05
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Three-dimensional structure of Dengue virus serotype 1 complexed with HMAb 14c10 Fab
分子名称: envelope protein
著者Teoh, E.P, Kukkaro, P, Teo, E.W, Lim, A, Tan, T.T, Shi, P.Y, Yip, A, Schul, W, Leo, Y.S, Chan, S.H, Smith, K.G.C, Ooi, E.E, Kemeny, D.M, Ng, G, Ng, M.L, Alonso, S, Fisher, D, Hanson, B, Lok, S.M, MacAry, P.A.
登録日2011-04-01
公開日2012-07-04
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献The structural basis for serotype-specific neutralization of dengue virus by a human antibody.
Sci Transl Med, 4, 2012
1WLJ
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human ISG20
分子名称: ACETATE ION, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ...
著者Horio, T, Murai, M, Inoue, T, Hamasaki, T, Tanaka, T, Ohgi, T.
登録日2004-06-28
公開日2004-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease
Febs Lett., 577, 2004

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