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PDB: 485 results

8I2E
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Crystal structure of Bacillus subtilis LytE in complex with IseA
Descriptor: Probable peptidoglycan endopeptidase LytE, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-05
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
8I2D
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Crystal structure of Bacillus subtilis LytE
Descriptor: Probable peptidoglycan endopeptidase LytE
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-19
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
8I2F
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Crystal structure of Bacillus subtilis LytE catalytic domain in complex with IseA
Descriptor: Probable peptidoglycan endopeptidase LytE, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-01-14
Release date:2023-04-05
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
7S0B
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BU of 7s0b by Molmil
Structure of the SARS-CoV-2 RBD in complex with neutralizing antibody N-612-056
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-612-056 Fab Heavy Chain, N-612-056 Light Chain, ...
Authors:Tanaka, S, Barnes, C.O, Bjorkman, P.J.
Deposit date:2021-08-30
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Rapid identification of neutralizing antibodies against SARS-CoV-2 variants by mRNA display.
Cell Rep, 38, 2022
8HIT
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BU of 8hit by Molmil
Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, JS007-VH, JS007-VL
Authors:Tan, S, Shi, Y, Wang, Q, Gao, G.F, Guan, J, Chai, Y, Qi, J.
Deposit date:2022-11-21
Release date:2023-02-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterization of the high-affinity anti-CTLA-4 monoclonal antibody JS007 for immune checkpoint therapy of cancer.
Mabs, 15, 2023
1MNM
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BU of 1mnm by Molmil
YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
Descriptor: DNA (STE6 OPERATOR DNA), PROTEIN (MAT ALPHA-2 TRANSCRIPTIONAL REPRESSOR), PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
Authors:Tan, S, Richmond, T.J.
Deposit date:1997-11-03
Release date:1998-03-18
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex.
Nature, 391, 1998
3VYT
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BU of 3vyt by Molmil
Crystal structure of the HypC-HypD-HypE complex (form I inward)
Descriptor: CHLORIDE ION, Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, ...
Authors:Watanabe, S, Miki, K.
Deposit date:2012-10-02
Release date:2012-11-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation
Structure, 20, 2012
3VYR
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BU of 3vyr by Molmil
Crystal structure of the HypC-HypD complex
Descriptor: CITRIC ACID, Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, ...
Authors:Watanabe, S, Miki, K.
Deposit date:2012-10-02
Release date:2012-11-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation
Structure, 20, 2012
3VYS
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Crystal structure of the HypC-HypD-HypE complex (form I)
Descriptor: Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, Hydrogenase expression/formation protein HypE, ...
Authors:Watanabe, S, Miki, K.
Deposit date:2012-10-02
Release date:2012-11-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation
Structure, 20, 2012
1YTF
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BU of 1ytf by Molmil
YEAST TFIIA/TBP/DNA COMPLEX
Descriptor: DNA (5'-D(*GP*TP*TP*TP*TP*AP*TP*AP*TP*AP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*AP*TP*GP*TP*AP*TP*AP*TP*AP*AP*AP*AP*C)-3'), PROTEIN (TATA BINDING PROTEIN (TBP)), ...
Authors:Tan, S, Hunziker, Y, Sargent, D.F, Richmond, T.J.
Deposit date:1996-04-05
Release date:1996-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a yeast TFIIA/TBP/DNA complex.
Nature, 381, 1996
8WT3
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Crystal structure of peptidoglycan DL-endopeptidase CwlO
Descriptor: CHLORIDE ION, Peptidoglycan DL-endopeptidase CwlO
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-10-17
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 2024
8WT4
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BU of 8wt4 by Molmil
Crystal structure of DL-endopeptidase CwlO complexed with IseA
Descriptor: Peptidoglycan DL-endopeptidase CwlO, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-10-17
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 2024
5XJ4
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BU of 5xj4 by Molmil
Complex structure of durvalumab-scFv/PD-L1
Descriptor: Programmed cell death 1 ligand 1, durvalumab-VH, durvalumab-VL
Authors:Tan, S, Liu, K, Chai, Y, Gao, G.F, Qi, J.
Deposit date:2017-04-29
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Distinct PD-L1 binding characteristics of therapeutic monoclonal antibody durvalumab
Protein Cell, 9, 2018
5WT9
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BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
Authors:Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
Deposit date:2016-12-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
7UX0
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BU of 7ux0 by Molmil
Human Sperm TMEM95 Ectodomain
Descriptor: Sperm-egg fusion protein TMEM95, TRIETHYLENE GLYCOL, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tang, S, Kim, P.S.
Deposit date:2022-05-04
Release date:2022-10-12
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Human sperm TMEM95 binds eggs and facilitates membrane fusion.
Proc.Natl.Acad.Sci.USA, 119, 2022
8KDX
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BU of 8kdx by Molmil
Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current
Descriptor: Microtubule-associated protein tau, Tyrosine-protein kinase Fyn
Authors:Padavattan, S, Jos, S.
Deposit date:2023-08-10
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current.
J.Mol.Biol., 436, 2024
2AW9
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BU of 2aw9 by Molmil
Superoxide dismutase with manganese from Deinococcus radiodurans
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Tanaka, S, Sawaya, M.R, Chan, S, Perry, L.J.
Deposit date:2005-08-31
Release date:2006-08-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of manganese superoxide dismutase from Deinococcus radiodurans
To be Published
6YEV
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BU of 6yev by Molmil
Crystal structure of MsrA C206 and Trx C35S complex from Escherichia coli
Descriptor: Peptide methionine sulfoxide reductase MsrA, SODIUM ION, Thioredoxin 1
Authors:Napolitano, S, Zyla, D, Glockshuber, R.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of a complex between the single-cysteine mutant MsrA C206 and Trx C35S from Escherichia coli
To Be Published
6PER
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BU of 6per by Molmil
Crystal Structure of Ligand-Free iSeroSnFR
Descriptor: 1,2-ETHANEDIOL, iSeroSnFR, a soluble, ...
Authors:Hartanto, S, Tian, L, Fisher, A.J.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning.
Cell, 183, 2020
7OT4
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BU of 7ot4 by Molmil
Crystal structure of MsrA variant C198C206 from Escherichia coli, oxidized
Descriptor: POTASSIUM ION, Peptide methionine sulfoxide reductase MsrA
Authors:Napolitano, S, Glockshuber, R.
Deposit date:2021-06-09
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Exploring the unique mechanism of methionine sulphoxide reduction by Escherichia coli
To Be Published
3IA0
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BU of 3ia0 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutS-G39V mutant
Descriptor: Ethanolamine utilization protein eutS
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-13
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I96
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BU of 3i96 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutS
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Ethanolamine utilization protein eutS, ...
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-10
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I87
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BU of 3i87 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutL Open Form
Descriptor: CHLORIDE ION, Ethanolamine utilization protein eutL
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I71
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BU of 3i71 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutK C-terminal domain
Descriptor: CITRATE ANION, Ethanolamine utilization protein eutK
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I82
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BU of 3i82 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutL Closed Form
Descriptor: Ethanolamine utilization protein eutL
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-09
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010

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PDB entries from 2024-07-17

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