3A3E
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![BU of 3a3e by Molmil](/molmil-images/mine/3a3e) | Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae, complexed with novel beta-lactam (CMV) | Descriptor: | (2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ethyl-2,3-dioxopiperazin-1-yl)amino]-2-phenylacetyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Penicillin-binding protein 4 | Authors: | Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2009-06-12 | Release date: | 2009-12-22 | Last modified: | 2013-11-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae J.Mol.Biol., 396, 2010
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3AQD
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3AK5
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![BU of 3ak5 by Molmil](/molmil-images/mine/3ak5) | |
6G6P
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![BU of 6g6p by Molmil](/molmil-images/mine/6g6p) | Crystal structure of the computationally designed Ika8 protein: crystal packing No.2 in P63 | Descriptor: | Ika8 | Authors: | Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. | Deposit date: | 2018-04-01 | Release date: | 2018-11-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
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6G6M
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![BU of 6g6m by Molmil](/molmil-images/mine/6g6m) | Crystal structure of the computationally designed Tako8 protein in P42212 | Descriptor: | SULFATE ION, Tako8 | Authors: | Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. | Deposit date: | 2018-04-01 | Release date: | 2018-11-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
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6G6Q
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![BU of 6g6q by Molmil](/molmil-images/mine/6g6q) | Crystal structure of the computationally designed Ika4 protein | Descriptor: | Ika4 | Authors: | Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. | Deposit date: | 2018-04-01 | Release date: | 2018-11-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
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6G6O
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![BU of 6g6o by Molmil](/molmil-images/mine/6g6o) | Crystal structure of the computationally designed Ika8 protein: crystal packing No.1 in P63 | Descriptor: | GLYCEROL, Ika8 | Authors: | Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. | Deposit date: | 2018-04-01 | Release date: | 2018-11-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
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6G6N
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![BU of 6g6n by Molmil](/molmil-images/mine/6g6n) | Crystal structure of the computationally designed Tako8 protein in C2 | Descriptor: | Tako8 | Authors: | Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D. | Deposit date: | 2018-04-01 | Release date: | 2018-11-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Computational design of symmetrical eight-bladed beta-propeller proteins. IUCrJ, 6, 2019
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1UEK
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![BU of 1uek by Molmil](/molmil-images/mine/1uek) | Crystal structure of 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase | Descriptor: | 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase | Authors: | Wada, T, Kuramitsu, S, Yokoyama, S, Tame, J.R.H, Park, S.Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-05-17 | Release date: | 2003-06-17 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal Structure of 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, an Enzyme in the Non-mevalonate Pathway of Isoprenoid Synthesis. J.Biol.Chem., 278, 2003
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1WUB
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![BU of 1wub by Molmil](/molmil-images/mine/1wub) | Crystal structure of the polyisoprenoid-binding protein, TT1927b, from Thermus thermophilus HB8 | Descriptor: | (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, conserved hypothetical protein TT1927b | Authors: | Handa, N, Idaka, M, Terada, T, Hamana, H, Ishizuka, Y, Park, S.-Y, Tame, J.R.H, Doi-Katayama, Y, Hirota, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-12-03 | Release date: | 2004-12-21 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8 Protein Sci., 14, 2005
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3VUS
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![BU of 3vus by Molmil](/molmil-images/mine/3vus) | Escherichia coli PgaB N-terminal domain | Descriptor: | ACETATE ION, MERCURY (II) ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ... | Authors: | Nishiyama, T, Noguchi, H, Yoshida, H, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-07-05 | Release date: | 2012-11-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | The structure of the deacetylase domain of Escherichia coli PgaB, an enzyme required for biofilm formation: a circularly permuted member of the carbohydrate esterase 4 family Acta Crystallogr.,Sect.D, 69, 2013
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2ZP9
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![BU of 2zp9 by Molmil](/molmil-images/mine/2zp9) | The Nature of the TRAP:Anti-TRAP complex | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | Authors: | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | Deposit date: | 2008-07-08 | Release date: | 2009-02-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZD0
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![BU of 2zd0 by Molmil](/molmil-images/mine/2zd0) | Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB | Authors: | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | Deposit date: | 2007-11-15 | Release date: | 2008-04-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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2ZP8
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![BU of 2zp8 by Molmil](/molmil-images/mine/2zp8) | The Nature of the TRAP:Anti-TRAP complex | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | Authors: | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | Deposit date: | 2008-07-08 | Release date: | 2009-02-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZCZ
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![BU of 2zcz by Molmil](/molmil-images/mine/2zcz) | Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | Descriptor: | TRYPTOPHAN, Transcription attenuation protein mtrB | Authors: | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | Deposit date: | 2007-11-15 | Release date: | 2008-04-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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1UAN
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![BU of 1uan by Molmil](/molmil-images/mine/1uan) | Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8 | Descriptor: | hypothetical protein TT1542 | Authors: | Handa, N, Terada, T, Tame, J.R.H, Park, S.-Y, Kinoshita, K, Ota, M, Nakamura, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-03-12 | Release date: | 2003-08-05 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8 PROTEIN SCI., 12, 2003
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1UIU
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![BU of 1uiu by Molmil](/molmil-images/mine/1uiu) | Crystal structures of the liganded and unliganded nickel binding protein NikA from Escherichia coli (Nickel unliganded form) | Descriptor: | Nickel-binding periplasmic protein | Authors: | Heddle, J, Scott, D.J, Unzai, S, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2003-07-22 | Release date: | 2004-02-03 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Crystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coli J.Biol.Chem., 278, 2003
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1UIV
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![BU of 1uiv by Molmil](/molmil-images/mine/1uiv) | Crystal structures of the liganded and unliganded nickel binding protein NikA from Escherichia coli (Nickel liganded form) | Descriptor: | NICKEL (II) ION, Nickel-binding periplasmic protein | Authors: | Heddle, J, Scott, D.J, Unzai, S, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2003-07-22 | Release date: | 2004-02-03 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Crystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coli J.Biol.Chem., 278, 2003
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1UIW
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![BU of 1uiw by Molmil](/molmil-images/mine/1uiw) | Crystal Structures of Unliganded and Half-Liganded Human Hemoglobin Derivatives Cross-Linked between Lys 82beta1 and Lys 82beta2 | Descriptor: | BUT-2-ENEDIAL, Hemoglobin alpha chain, Hemoglobin beta chain, ... | Authors: | Park, S.-Y, Shibayama, N, Tame, J.R.H. | Deposit date: | 2003-07-23 | Release date: | 2003-08-12 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Crystal structures of unliganded and half-liganded human hemoglobin derivatives cross-linked between Lys 82beta1 and Lys 82beta2 Biochemistry, 43, 2004
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1WXR
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![BU of 1wxr by Molmil](/molmil-images/mine/1wxr) | Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli | Descriptor: | haemoglobin protease | Authors: | Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2005-01-31 | Release date: | 2005-03-01 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli J.Biol.Chem., 280, 2005
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1V9K
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![BU of 1v9k by Molmil](/molmil-images/mine/1v9k) | The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli | Descriptor: | Ribosomal large subunit pseudouridine synthase C, SULFATE ION | Authors: | Machida, Y, Mizutani, K, Unzai, S, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2004-01-26 | Release date: | 2004-05-18 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli Biochemistry, 43, 2004
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1V9F
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![BU of 1v9f by Molmil](/molmil-images/mine/1v9f) | Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli | Descriptor: | PHOSPHATE ION, Ribosomal large subunit pseudouridine synthase D | Authors: | Mizutani, K, Machida, Y, Unzai, S, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2004-01-26 | Release date: | 2004-05-18 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli Biochemistry, 43, 2004
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2ZA6
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![BU of 2za6 by Molmil](/molmil-images/mine/2za6) | recombinant horse L-chain apoferritin | Descriptor: | CADMIUM ION, Ferritin light chain | Authors: | Yamashita, I, Mishima, Y, Park, S.-Y, Heddle, J.G, Tame, J.R.H. | Deposit date: | 2007-10-02 | Release date: | 2008-01-22 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Effect of N-terminal Residues on the Structural Stability of Recombinant Horse L-chain Apoferritin in an Acidic Environment J.BIOCHEM.(TOKYO), 142, 2007
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2ZA7
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![BU of 2za7 by Molmil](/molmil-images/mine/2za7) | recombinant horse L-chain apoferritin N-terminal deletion mutant (residues 1-4) | Descriptor: | Ferritin light chain | Authors: | Yamashita, I, Mishima, Y, Park, S.-Y, Heddle, J.G, Tame, J.R.H. | Deposit date: | 2007-10-02 | Release date: | 2008-01-22 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Effect of N-terminal Residues on the Structural Stability of Recombinant Horse L-chain Apoferritin in an Acidic Environment J.BIOCHEM.(TOKYO), 142, 2007
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3VRF
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![BU of 3vrf by Molmil](/molmil-images/mine/3vrf) | The crystal structure of hemoglobin from woolly mammoth in the carbonmonoxy forms | Descriptor: | CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta/delta hybrid, ... | Authors: | Noguchi, H, Campbell, K.L, Ho, C, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2012-04-09 | Release date: | 2012-11-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structures of haemoglobin from woolly mammoth in liganded and unliganded states. Acta Crystallogr.,Sect.D, 68, 2012
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