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PDB: 84 results

8J68
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Crystal structure of the LOV1 R60K mutant of Klebsormidium nitens phototropin
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin
Authors:Gautam, A.K, Sharma, S, Gourinath, S, Kateriya, S.
Deposit date:2023-04-25
Release date:2024-05-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.845 Å)
Cite:Unusual photodynamic characteristics of the light-oxygen-voltage domain of phototropin linked to terrestrial adaptation of Klebsormidium nitens.
Febs J., 2024
8IYN
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Crystal structure of LOV1 D33N mutant of phototropin from Klebsormidium nitens
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin
Authors:Gautam, A.K, Sharma, S, Gourinath, S, Kateriya, S.
Deposit date:2023-04-05
Release date:2024-04-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.081 Å)
Cite:Unusual photodynamic characteristics of the light-oxygen-voltage domain of phototropin linked to terrestrial adaptation of Klebsormidium nitens.
Febs J., 2024
8I11
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Crystal structure of LOV1 domain of phototropin from Klebsormidium nitens
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin
Authors:Gautam, A.K, Sharma, S, Gourinath, S, Kateriya, S.
Deposit date:2023-01-12
Release date:2024-01-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.855 Å)
Cite:Unusual photodynamic characteristics of the light-oxygen-voltage domain of phototropin linked to terrestrial adaptation of Klebsormidium nitens.
Febs J., 2024
8IL9
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BU of 8il9 by Molmil
Crystal structure of the LOV1 Q122N mutant of Klebsormidium nitens phototropin
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin
Authors:Gautam, A.K, Sharma, S, Gourinath, S, Kateriya, S.
Deposit date:2023-03-03
Release date:2024-03-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Unusual photodynamic characteristics of the light-oxygen-voltage domain of phototropin linked to terrestrial adaptation of Klebsormidium nitens.
Febs J., 2024
2Y7I
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BU of 2y7i by Molmil
Structural basis for high arginine specificity in Salmonella typhimurium periplasmic binding protein STM4351.
Descriptor: ACETATE ION, ARGININE, GLYCEROL, ...
Authors:Stamp, A.L, Owen, P, El Omari, K, Lockyer, M, Lamb, H.K, Charles, I.G, Hawkins, A.R, Stammers, D.K.
Deposit date:2011-01-31
Release date:2011-05-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Microcalorimetric Analyses Reveal the Structural Basis for High Arginine Specificity in the Salmonella Enterica Serovar Typhimurium Periplasmic Binding Protein Stm4351.
Proteins, 79, 2011
6ZCT
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Nonstructural protein 10 (nsp10) from SARS CoV-2
Descriptor: ZINC ION, nsp10
Authors:Rogstam, A, Nyblom, M, Christensen, S, Sele, C, Lindvall, T, Rasmussen, A.A, Andre, I, Fisher, S.Z, Knecht, W, Kozielski, F.
Deposit date:2020-06-12
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2.
Int J Mol Sci, 21, 2020
2XF4
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BU of 2xf4 by Molmil
Crystal structure of Salmonella enterica serovar typhimurium YcbL
Descriptor: HYDROXYACYLGLUTATHIONE HYDROLASE, TETRAETHYLENE GLYCOL, ZINC ION
Authors:Stamp, A, Owen, P, El Omari, K, Nichols, C, Lockyer, M, Lamb, H, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2010-05-20
Release date:2010-07-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Characterization of Salmonella Enterica Serovar Typhimurium Ycbl: An Unusual Type II Glyoxalase
Protein Sci., 19, 2010
6QKI
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Native structure of EgtB from Chloracidobacterium thermophilum, a type II sulfoxide synthase
Descriptor: FE (III) ION, Uncharacterized protein
Authors:Stampfli, A.R, Badri, B.N, Schirmer, T, Seebeck, F.P.
Deposit date:2019-01-29
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:An Alternative Active Site Architecture for O2Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum.
J.Am.Chem.Soc., 141, 2019
6QKJ
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EgtB from Chloracidobacterium thermophilum, a type II sulfoxide synthase in complex with N,N,N-trimethyl-histidine
Descriptor: CHLORIDE ION, FE (III) ION, IMIDAZOLE, ...
Authors:Stampfli, A.R, Badri, B.N, Schirmer, T, Seebeck, F.P.
Deposit date:2019-01-29
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An Alternative Active Site Architecture for O2Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum.
J.Am.Chem.Soc., 141, 2019
2DX4
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BU of 2dx4 by Molmil
NMR structure of DP5_conformation2: monomeric beta-hairpin
Descriptor: DP5_conformation2
Authors:Tamura, A, Araki, M.
Deposit date:2006-08-23
Release date:2007-01-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
2DX3
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BU of 2dx3 by Molmil
NMR structure of DP5_conformation1: monomeric alpha-helix
Descriptor: DP5_conformation1
Authors:Tamura, A, Araki, M.
Deposit date:2006-08-23
Release date:2007-01-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
3AWI
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BU of 3awi by Molmil
Bifunctional tRNA modification enzyme MnmC from Escherichia coli
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC
Authors:Kitamura, A, Sengoku, T, Nishimoto, M, Yokoyama, S, Bessho, Y.
Deposit date:2011-03-23
Release date:2011-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the bifunctional tRNA modification enzyme MnmC from Escherichia coli
Protein Sci., 2011
2DX2
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BU of 2dx2 by Molmil
NMR structure of TP (Target Peptide): monomeric 3_10 helix
Descriptor: Target Peptide
Authors:Tamura, A, Araki, M.
Deposit date:2006-08-23
Release date:2007-01-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
1HY8
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BU of 1hy8 by Molmil
SOLUTION STRUCTURE OF B. SUBTILIS ACYL CARRIER PROTEIN
Descriptor: ACYL CARRIER PROTEIN
Authors:Xu, G.-Y, Tam, A, Lin, L, Hixon, J, Fritz, C.C, Power, R.
Deposit date:2001-01-18
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of B. subtilis acyl carrier protein.
Structure, 9, 2001
4J12
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BU of 4j12 by Molmil
monomeric Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, human Fc fragment
Authors:Ishino, T, Wang, M, Mosyak, L, Tam, A, Duan, W, Svenson, K, Joyce, A, O'Hara, D, Lin, L, Somers, W, Kriz, R.
Deposit date:2013-01-31
Release date:2013-05-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering a Monomeric Fc Domain Modality by N-Glycosylation for the Half-life Extension of Biotherapeutics.
J.Biol.Chem., 288, 2013
1F7L
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BU of 1f7l by Molmil
HOLO-(ACYL CARRIER PROTEIN) SYNTHASE IN COMPLEX WITH COENZYME A AT 1.5A
Descriptor: CALCIUM ION, CHLORIDE ION, COENZYME A, ...
Authors:Parris, K.D, Lin, L, Tam, A, Mathew, R, Hixon, J, Stahl, M, Fritz, C.C, Seehra, J, Somers, W.S.
Deposit date:2000-06-27
Release date:2001-06-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites.
Structure Fold.Des., 8, 2000
1F7T
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BU of 1f7t by Molmil
HOLO-(ACYL CARRIER PROTEIN) SYNTHASE AT 1.8A
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
Authors:Parris, K.D, Lin, L, Tam, A, Mathew, R, Hixon, J, Stahl, M, Fritz, C.C, Seehra, J, Somers, W.S.
Deposit date:2000-06-27
Release date:2001-06-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites.
Structure Fold.Des., 8, 2000
1F80
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BU of 1f80 by Molmil
HOLO-(ACYL CARRIER PROTEIN) SYNTHASE IN COMPLEX WITH HOLO-(ACYL CARRIER PROTEIN)
Descriptor: ACYL CARRIER PROTEIN, HOLO-(ACYL CARRIER PROTEIN) SYNTHASE, SODIUM ION
Authors:Parris, K.D, Lin, L, Tam, A, Mathew, R, Hixon, J, Stahl, M, Fritz, C.C, Seehra, J, Somers, W.S.
Deposit date:2000-06-28
Release date:2001-06-28
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites.
Structure Fold.Des., 8, 2000
8QF6
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BU of 8qf6 by Molmil
Sulfoxide synthase from Chloracidobacterium thermophilum, EgtB type II, in complex with iron and trimethylhistidine
Descriptor: (2~{S})-2-(dimethylamino)-3-(3-methylimidazol-4-yl)propanoic acid, Ergothioneine biosynthesis protein EgtB, FE (III) ION
Authors:Vasseur, C.M, Stampfli, A.R, Seebeck, F.P.
Deposit date:2023-09-03
Release date:2024-09-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Catalytic mechanism analysis of sulfoxide synthase via inhibition assay
To Be Published
3ZLH
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BU of 3zlh by Molmil
Structure of group A Streptococcal enolase
Descriptor: ENOLASE
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
3ZLG
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BU of 3zlg by Molmil
Structure of group A Streptococcal enolase K362A mutant
Descriptor: ENOLASE, PHOSPHATE ION
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
6MJW
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BU of 6mjw by Molmil
human cGAS catalytic domain bound with the inhibitor G150
Descriptor: 1-[9-(6-aminopyridin-3-yl)-6,7-dichloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-23
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6MJU
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human cGAS catalytic domain bound with the inhibitor G108
Descriptor: 1-[6,7-dichloro-9-(1H-pyrazol-4-yl)-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-22
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6MJX
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BU of 6mjx by Molmil
human cGAS catalytic domain bound with cGAMP
Descriptor: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-23
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
1JH1
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Crystal Structure of MMP-8 complexed with a 6H-1,3,4-thiadiazine derived inhibitor
Descriptor: BUT-3-ENYL-[5-(4-CHLORO-PHENYL)-3,6-DIHYDRO-[1,3,4]THIADIAZIN-2-YLIDENE]-AMINE, CALCIUM ION, Matrix Metalloproteinase 8, ...
Authors:Schroder, J, Henke, A, Wenzel, H, Brandstetter, H, Stammler, H.G, Stammler, A, Pfeiffer, W.D, Tschesche, H.
Deposit date:2001-06-27
Release date:2001-12-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based design and synthesis of potent matrix metalloproteinase inhibitors derived from a 6H-1,3,4-thiadiazine scaffold.
J.Med.Chem., 44, 2001

 

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