Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 426 results
6T7D
DownloadVisualize
BU of 6t7d by Molmil
Structure of human Sox11 transcription factor in complex with a nucleosome
Descriptor: DNA (151-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P.
Deposit date:2019-10-21
Release date:2020-04-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
Nature, 580, 2020
4HD0
DownloadVisualize
BU of 4hd0 by Molmil
Mre11 ATLD17/18 mutation retains Tel1/ATM activity but blocks DNA double-strand break repair
Descriptor: DNA double-strand break repair protein Mre11, MANGANESE (II) ION
Authors:Limbo, O, Moiani, D, Kertokalio, A, Wyman, C, Tainer, J.A, Russell, P.
Deposit date:2012-10-01
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mre11 ATLD17/18 mutation retains Tel1/ATM activity but blocks DNA double-strand break repair.
Nucleic Acids Res., 40, 2012
6T7A
DownloadVisualize
BU of 6t7a by Molmil
Structure of human Sox11 transcription factor in complex with a nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P.
Deposit date:2019-10-21
Release date:2020-04-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
Nature, 580, 2020
6T7B
DownloadVisualize
BU of 6t7b by Molmil
Structure of human Sox2 transcription factor in complex with a nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P.
Deposit date:2019-10-21
Release date:2020-04-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
Nature, 580, 2020
6T7C
DownloadVisualize
BU of 6t7c by Molmil
Structure of two copies of human Sox11 transcription factor in complex with a nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P.
Deposit date:2019-10-21
Release date:2020-04-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
Nature, 580, 2020
8PM7
DownloadVisualize
BU of 8pm7 by Molmil
transcription factor BARHL2 bound to TAATC DNA sequence
Descriptor: BarH-like 2 homeobox protein, DNA
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:transcription factor BARHL2 bound to DNA sequences
To Be Published
8PMC
DownloadVisualize
BU of 8pmc by Molmil
transcription factor BARHL2 bound to TAATT DNA sequence
Descriptor: BarH-like 2 homeobox protein, DNA
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:transcription factor BARHL2 bound to DNA sequences
To Be Published
8PNC
DownloadVisualize
BU of 8pnc by Molmil
Transcription factor BARHL2 bound to TAAGT DNA sequence
Descriptor: BarH-like 2 homeobox protein, DNA
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-06-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Transcription factor BARHL2 bound to different DNA sequences
To Be Published
5TUH
DownloadVisualize
BU of 5tuh by Molmil
Archaellum periplasmic stator protein FlaG from Sulfolobus acidocaldarius
Descriptor: Flagellar biosynthesis protein FlaG, GLYCEROL
Authors:Tsai, C.-L, Tainer, J.A.
Deposit date:2016-11-06
Release date:2018-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.929 Å)
Cite:The structure of the periplasmic FlaG-FlaF complex and its essential role for archaellar swimming motility.
Nat Microbiol, 5, 2020
7K06
DownloadVisualize
BU of 7k06 by Molmil
Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, ERI1 exoribonuclease 3, MAGNESIUM ION
Authors:Thapar, R, Arvai, A.S, Tainer, J.A.
Deposit date:2020-09-03
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases
To Be Published
8OSB
DownloadVisualize
BU of 8osb by Molmil
TWIST1-TCF4-ALX4 complex on specific DNA
Descriptor: DNA (25-MER), Homeobox protein aristaless-like 4, Transcription factor 4, ...
Authors:Morgunova, E, Kim, S, Popov, A, Wysocka, J, Taipale, J.
Deposit date:2023-04-18
Release date:2024-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:DNA-guided transcription factor cooperativity shapes face and limb mesenchyme.
Cell, 187, 2024
1AP5
DownloadVisualize
BU of 1ap5 by Molmil
TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Borgstahl, G.E.O, Tainer, J.A.
Deposit date:1997-07-24
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34.
Biochemistry, 37, 1998
1AP6
DownloadVisualize
BU of 1ap6 by Molmil
TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Tainer, J.A.
Deposit date:1997-07-24
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34.
Biochemistry, 37, 1998
1B43
DownloadVisualize
BU of 1b43 by Molmil
FEN-1 FROM P. FURIOSUS
Descriptor: PROTEIN (FEN-1)
Authors:Hosfield, D.J, Mol, C.D, Shen, B, Tainer, J.A.
Deposit date:1999-01-05
Release date:2000-01-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity.
Cell(Cambridge,Mass.), 95, 1998
1AV8
DownloadVisualize
BU of 1av8 by Molmil
RIBONUCLEOTIDE REDUCTASE R2 SUBUNIT FROM E. COLI
Descriptor: MU-OXO-DIIRON, RIBONUCLEOTIDE REDUCTASE R2
Authors:Han, S, Arvai, A, Tainer, J.A.
Deposit date:1997-09-30
Release date:1998-10-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography.
Biochemistry, 37, 1998
1AY2
DownloadVisualize
BU of 1ay2 by Molmil
STRUCTURE OF THE FIBER-FORMING PROTEIN PILIN AT 2.6 ANGSTROMS RESOLUTION
Descriptor: HEPTANE-1,2,3-TRIOL, PLATINUM (II) ION, TYPE 4 PILIN, ...
Authors:Forest, K.T, Parge, H.E, Tainer, J.A.
Deposit date:1997-11-13
Release date:1998-04-29
Last modified:2023-02-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the fibre-forming protein pilin at 2.6 A resolution.
Nature, 378, 1995
6SJD
DownloadVisualize
BU of 6sjd by Molmil
ZC3H12B-ribonuclease domain bound to RNA
Descriptor: CACODYLATE ION, MAGNESIUM ION, Probable ribonuclease ZC3H12B, ...
Authors:Morgunova, E, Bourenkov, G, Taipale, J.
Deposit date:2019-08-13
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences.
Genome Res., 30, 2020
1BIX
DownloadVisualize
BU of 1bix by Molmil
THE CRYSTAL STRUCTURE OF THE HUMAN DNA REPAIR ENDONUCLEASE HAP1 SUGGESTS THE RECOGNITION OF EXTRA-HELICAL DEOXYRIBOSE AT DNA ABASIC SITES
Descriptor: AP ENDONUCLEASE 1, PLATINUM (II) ION, SAMARIUM (III) ION
Authors:Gorman, M.A, Morera, S, Rothwell, D.G, De La Fortelle, E, Mol, C.D, Tainer, J.A, Hickson, I.D, Freemont, P.S.
Deposit date:1998-06-19
Release date:1999-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the human DNA repair endonuclease HAP1 suggests the recognition of extra-helical deoxyribose at DNA abasic sites.
EMBO J., 16, 1997
1BUH
DownloadVisualize
BU of 1buh by Molmil
CRYSTAL STRUCTURE OF THE HUMAN CDK2 KINASE COMPLEX WITH CELL CYCLE-REGULATORY PROTEIN CKSHS1
Descriptor: PROTEIN (CDK2 HUMAN), PROTEIN (CKSHS1 HUMAN)
Authors:Bourne, Y, Tainer, J.A.
Deposit date:1998-09-03
Release date:1998-09-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure and mutational analysis of the human CDK2 kinase complex with cell cycle-regulatory protein CksHs1.
Cell(Cambridge,Mass.), 84, 1996
8PN4
DownloadVisualize
BU of 8pn4 by Molmil
transcription factor BARHL2 bound to DNA sequences
Descriptor: ACETATE ION, BarH-like 2 homeobox protein, DNA
Authors:Morgunova, E, Yin, Y, Popov, A, Taipale, J.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:transcription factor BARHL2 bound to DNA sequences
To Be Published
8PM5
DownloadVisualize
BU of 8pm5 by Molmil
transcription factor BARHL2 bound to TAAAT DNA sequence
Descriptor: BarH-like 2 homeobox protein, DNA (5'-D(*AP*AP*CP*CP*AP*TP*TP*TP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*AP*AP*AP*TP*GP*GP*TP*T)-3')
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:transcription factor BARHL2 bound to DNA sequences
To Be Published
8PMV
DownloadVisualize
BU of 8pmv by Molmil
transcription factor BARHL2 bound to TAAGC DNA sequence
Descriptor: BarH-like 2 homeobox protein, DNA
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:transcription factor BARHL2 bound to DNA sequences
To Be Published
3NQS
DownloadVisualize
BU of 3nqs by Molmil
Crystal Structure of Inducible Nitric Oxide Synthase with N-Nitrosated-pterin
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE, ...
Authors:Rosenfeld, R.J, Getzoff, E.D, Tainer, J.A.
Deposit date:2010-06-29
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nitric-oxide synthase forms N-NO-pterin and S-NO-cys: implications for activity, allostery, and regulation.
J.Biol.Chem., 285, 2010
4YDD
DownloadVisualize
BU of 4ydd by Molmil
Crystal structure of the perchlorate reductase PcrAB from Azospira suillum PS
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Tsai, C.-L, Youngblut, M.D, Tainer, J.A.
Deposit date:2015-02-21
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.
J.Biol.Chem., 291, 2016
4YDS
DownloadVisualize
BU of 4yds by Molmil
FlaH from Sulfolobus acidocaldarius with ATP and Mg-Ion
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Flagella-related protein H, MAGNESIUM ION
Authors:Reindl, S, Arvai, A.S, Tainer, J.A.
Deposit date:2015-02-23
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The nucleotide-dependent interaction of FlaH and FlaI is essential for assembly and function of the archaellum motor.
Mol.Microbiol., 99, 2016

225681

数据于2024-10-02公开中

PDB statisticsPDBj update infoContact PDBjnumon