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PDB: 378 results

5KZU
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Crystal structure of an acetylcholine binding protein from Aplysia californica (Ac-AChBP) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
Descriptor: 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole, SULFATE ION, Soluble acetylcholine receptor, ...
Authors:Bobango, J, Wu, J, Talley, I.T, Sankaran, B, Talley, T.T.
Deposit date:2016-07-25
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
To Be Published
8SZJ
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Human glutaminase C (Y466W) with L-Gln and Pi, filamentous form
Descriptor: GLUTAMINE, Glutaminase kidney isoform, mitochondrial, ...
Authors:Feng, S, Aplin, C, Nguyen, T.-T.T, Milano, S.K, Cerione, R.A.
Deposit date:2023-05-29
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Filament formation drives catalysis by glutaminase enzymes important in cancer progression.
Nat Commun, 15, 2024
8T0Z
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Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Descriptor: GLUTAMINE, Glutaminase liver isoform, mitochondrial
Authors:Feng, S, Aplin, C, Nguyen, T.-T.T, Milano, S.K, Cerione, R.A.
Deposit date:2023-06-01
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Filament formation drives catalysis by glutaminase enzymes important in cancer progression.
Nat Commun, 15, 2024
8SZL
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BU of 8szl by Molmil
Human liver-type glutaminase (Apo form)
Descriptor: Glutaminase liver isoform, mitochondrial
Authors:Feng, S, Aplin, C, Nguyen, T.-T.T, Milano, S.K, Cerione, R.A.
Deposit date:2023-05-30
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Filament formation drives catalysis by glutaminase enzymes important in cancer progression.
Nat Commun, 15, 2024
5JME
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BU of 5jme by Molmil
Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
Descriptor: Soluble acetylcholine receptor, alpha-conotoxin PeIA from Conus pergrandis
Authors:Bobango, J, Sankaran, B, McIntosh, J.M, Talley, T.T.
Deposit date:2016-04-28
Release date:2016-05-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
To Be Published
5TVC
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BU of 5tvc by Molmil
Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) containing loop C from the human alpha 3 nicotinic acetylcholine receptor in complex with (E,2S)-N-methyl-5-(5-phenoxy-3-pyridyl)pent-4-en-2-amine (TI-5312)
Descriptor: (E,2S)-N-methyl-5-(5-phenoxy-3-pyridyl)pent-4-en-2-amine, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Bobango, J, Wu, J, Talley, I.T, Talley, T.T.
Deposit date:2016-11-08
Release date:2016-11-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.926 Å)
Cite:Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) containing loop C from the human alpha 3 nicotinic acetylcholine receptor in complex with (E,2S)-N-methyl-5-(5-phenoxy-3-pyridyl)pent-4-en-2-amine (TI-5312)
To Be Published
5X1R
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PpkA-294 apo form
Descriptor: PpkA-294
Authors:Li, P.P, Ran, T.T, Xu, D.Q, Wang, W.W.
Deposit date:2017-01-26
Release date:2018-01-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism.
Biochem.J., 475, 2018
1GUF
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BU of 1guf by Molmil
Enoyl thioester reductase from Candida tropicalis
Descriptor: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH, B-SPECIFIC] 1, MITOCHONDRIAL, ...
Authors:Airenne, T.T, Torkko, J.M, Van Der Plas, S, Sormunen, R.T, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
Deposit date:2002-01-25
Release date:2003-03-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance
J.Mol.Biol., 327, 2003
1H0K
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Enoyl thioester reductase 2
Descriptor: 2,4-DIENOYL-COA REDUCTASE, GLYCEROL, SULFATE ION
Authors:Airenne, T.T, Torkko, J.M, Hiltunen, J.K.
Deposit date:2002-06-20
Release date:2003-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal Structure of Enoyl Thioester Reductase 2
To be Published
1GU7
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BU of 1gu7 by Molmil
Enoyl thioester reductase from Candida tropicalis
Descriptor: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH, B-SPECIFIC] 1,MITOCHONDRIAL, GLYCEROL, ...
Authors:Airenne, T.T, Torkko, J.M, Wierenga, R.K, Hiltunen, J.K.
Deposit date:2002-01-24
Release date:2003-03-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance
J.Mol.Biol., 327, 2003
2G8X
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Escherichia coli Y209W apoprotein
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CARBONATE ION, PHOSPHATE ION, ...
Authors:Lee, T.T, Finer-Moore, J.S, Stroud, R.M.
Deposit date:2006-03-03
Release date:2006-03-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The role of protein dynamics in thymidylate synthase catalysis: Variants of conserved dUMP-binding Tyr-261
TO BE PUBLISHED
8J9B
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BU of 8j9b by Molmil
LnaB-actin binary complex
Descriptor: Actin gamma 1, Type IV secretion protein Dot
Authors:Chen, T.T, Ouyang, S.Y.
Deposit date:2023-05-03
Release date:2024-05-08
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structure of Legionella effector LnaB-actin binary complex
To Be Published
8JCD
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BU of 8jcd by Molmil
Human H2BFWTH100R nucleosome with 601 DNA
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type W-T, ...
Authors:Ding, D.B, Ishibashi, T, Nguyen, T.T.
Deposit date:2023-05-11
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Human H2BFWTH100R nucleosome with 601 DNA
to be published
8JBX
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BU of 8jbx by Molmil
Human canonical 601 DNA nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-C/E/F/G/I, ...
Authors:Ding, D.B, Ishibashi, T, Nguyen, T.T.
Deposit date:2023-05-09
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Human canonical 601 DNA nucleosome
to be published
8K4N
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BU of 8k4n by Molmil
Structure of GPR34-Gi complex
Descriptor: (2R)-2-azanyl-3-[oxidanyl-[(2R)-2-oxidanyl-3-tetradec-9-enoyloxy-propoxy]phosphoryl]oxy-propanoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Wong, T.S, Zeng, Z.C, Xiong, T.T, Gan, S.Y, He, G.D, Du, Y.
Deposit date:2023-07-20
Release date:2023-10-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Cryo-EM structure of GPR34-Gi complex
To Be Published
7S94
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BU of 7s94 by Molmil
Structure of the core postfusion porcine endogenous retrovirus fusion protein
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Endogenous retrovirus group S71 member 1 Env polyprotein
Authors:Dean, T.T, Lee, J.E.
Deposit date:2021-09-20
Release date:2022-01-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Core Postfusion Porcine Endogenous Retrovirus Fusion Protein.
Mbio, 13, 2022
7ALM
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BU of 7alm by Molmil
Crystal structure of human GDAP1 at 2.8 Angstrom resolution.
Descriptor: Ganglioside-induced differentiation-associated protein 1
Authors:Nguyen, G.T.T, Sutinen, A, Raasakka, A, Kursula, P.
Deposit date:2020-10-06
Release date:2021-02-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations.
Front Mol Biosci, 7, 2020
7SBM
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BU of 7sbm by Molmil
Human glutaminase C (Y466W) with L-Gln, open conformation
Descriptor: GLUTAMINE, Isoform 3 of Glutaminase kidney isoform, mitochondrial
Authors:Nguyen, T.-T.T, Cerione, R.A.
Deposit date:2021-09-25
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High-resolution structures of mitochondrial glutaminase C tetramers indicate conformational changes upon phosphate binding.
J.Biol.Chem., 298, 2022
7AIA
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BU of 7aia by Molmil
Complex of human GDAP1 with hexadecanedioic acid
Descriptor: ETHANOL, GLYCEROL, Ganglioside-induced differentiation-associated protein 1, ...
Authors:Nguyen, G.T.T, Sutinen, A, Kursula, P.
Deposit date:2020-09-26
Release date:2021-02-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Complete Dimeric Human GDAP1 Core Domain Provides Insights into Ligand Binding and Clustering of Disease Mutations.
Front Mol Biosci, 7, 2020
7SBN
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BU of 7sbn by Molmil
Human glutaminase C (Y466W) with L-Gln, closed conformation
Descriptor: GLUTAMINE, Isoform 3 of Glutaminase kidney isoform, mitochondrial
Authors:Nguyen, T.-T.T, Cerione, R.A.
Deposit date:2021-09-25
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:High-resolution structures of mitochondrial glutaminase C tetramers indicate conformational changes upon phosphate binding.
J.Biol.Chem., 298, 2022
2WZY
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BU of 2wzy by Molmil
Crystal structure of A-AChBP in complex with 13-desmethyl spirolide C
Descriptor: 13-DESMETHYL SPIROLIDE C, SOLUBLE ACETYLCHOLINE RECEPTOR
Authors:Bourne, Y, Radic, Z, Araoz, R, Talley, T.T, Benoit, E, Servent, D, Taylor, P, Molgo, J, Marchot, P.
Deposit date:2009-12-03
Release date:2010-03-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural Determinants in Phycotoxins and Achbp Conferring High Affinity Binding and Nicotinic Achr Antagonism.
Proc.Natl.Acad.Sci.USA, 107, 2010
1WBI
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BU of 1wbi by Molmil
AVR2
Descriptor: AVIDIN-RELATED PROTEIN 2, BIOTIN, GLYCEROL, ...
Authors:Airenne, T.T, Hytonen, V.P, Maatta, J.H, Kidron, H, Halling, K.K, Horha, J, Kulomaa, T, Nyholm, T.K.M, Johnson, M.S, Salminen, T.A, Kulomaa, M.S.
Deposit date:2004-11-01
Release date:2005-10-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Avidin Related Protein 2 Shows Unique Structural and Functional Features Among the Avidin Protein Family.
Bmc Biotechnol., 5, 2005
7B2G
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BU of 7b2g by Molmil
Crystal structure of R120Q GDAP1 mutant
Descriptor: GLYCEROL, Ganglioside-induced differentiation-associated protein 1
Authors:Nguyen, G.T.T, Sutinen, A, Kursula, P.
Deposit date:2020-11-26
Release date:2021-12-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Conserved intramolecular networks in GDAP1 are closely connected to CMT-linked mutations and protein stability.
Plos One, 18, 2023
1VYO
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BU of 1vyo by Molmil
Crystal structure of avidin
Descriptor: AVIDIN, GLYCEROL
Authors:Airenne, T.T, Johnson, M.S, Salminen, T.A.
Deposit date:2004-05-03
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Binding Properties of Haba-Type Azo Derivatives to Avidin and Avidin-Related Protein 4.
Chem.Biol., 13, 2006
1WBE
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BU of 1wbe by Molmil
X-ray structure of bovine GLTP
Descriptor: DECANOIC ACID, GLYCEROL, GLYCOLIPID TRANSFER PROTEIN
Authors:Airenne, T.T, Kidron, H, West, G, Nymalm, Y, Nylund, M, Mattjus, P, Salminen, T.A.
Deposit date:2004-11-01
Release date:2005-11-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural Evidence for Adaptive Ligand Binding of Glycolipid Transfer Protein.
J.Mol.Biol., 355, 2006

226707

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