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PDB: 634 results

8CPW
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Human apoferritin after 405 nm + 488 nm laser exposure in presence of rsEGFP2
Descriptor: Ferritin heavy chain, N-terminally processed, MAGNESIUM ION, ...
Authors:Last, M.G.F, Noteborn, W.E.M, Sharp, T.H.
Deposit date:2023-03-03
Release date:2023-03-15
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (1.79 Å)
Cite:Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM.
J.Struct.Biol., 215, 2023
8CPU
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BU of 8cpu by Molmil
Human apoferritin after 561 nm laser exposure
Descriptor: Ferritin heavy chain, N-terminally processed, MAGNESIUM ION, ...
Authors:Last, M.G.F, Noteborn, W.E.M, Sharp, T.H.
Deposit date:2023-03-03
Release date:2023-03-15
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (1.76 Å)
Cite:Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM.
J.Struct.Biol., 215, 2023
2IUU
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BU of 2iuu by Molmil
P. aeruginosa FtsK motor domain, hexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA TRANSLOCASE FTSK
Authors:Massey, T.H, Mercogliano, C.P, Yates, J, Sherratt, D.J, Lowe, J.
Deposit date:2006-06-07
Release date:2006-08-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk
Mol.Cell, 23, 2006
8CPT
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BU of 8cpt by Molmil
Human apoferritin after 488 nm laser exposure
Descriptor: Ferritin heavy chain, N-terminally processed, MAGNESIUM ION, ...
Authors:Last, M.G.F, Noteborn, W.E.M, Sharp, T.H.
Deposit date:2023-03-03
Release date:2023-03-15
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (1.79 Å)
Cite:Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM.
J.Struct.Biol., 215, 2023
1PU3
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BU of 1pu3 by Molmil
The Solution NMR Structure and Dynamics of a Recombinant Onconase with Altered N-terminal and Met23 residues
Descriptor: P-30 protein
Authors:Gorbatyuk, V.Y, Tsai, C.K, Chang, C.F, Huang, T.H.
Deposit date:2003-06-24
Release date:2004-03-16
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Effect of N-terminal and Met23 Mutations on the Structure and Dynamics of Onconase
J.Biol.Chem., 279, 2004
3H99
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BU of 3h99 by Molmil
Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with methionine
Descriptor: CITRIC ACID, METHIONINE, Methionyl-tRNA synthetase, ...
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
1EAO
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BU of 1eao by Molmil
THE RUNX1 Runt domain at 1.4A resolution: a structural switch and specifically bound chloride ions modulate DNA binding
Descriptor: BROMIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1
Authors:Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T.H, Grundstrom, T, Sauer, U.H.
Deposit date:2001-07-14
Release date:2002-09-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Runx1 Runt Domain at 1.25A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding
J.Mol.Biol., 322, 2002
3H97
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Structure of a mutant methionyl-tRNA synthetase with modified specificity
Descriptor: CITRIC ACID, Methionyl-tRNA synthetase, ZINC ION
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
7VXG
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BU of 7vxg by Molmil
Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor TK-453
Descriptor: 6-[4-(aminomethyl)-4-methyl-piperidin-1-yl]-3-[2,3-bis(chloranyl)phenyl]sulfanyl-pyrazin-2-amine, Tyrosine-protein phosphatase non-receptor type 11
Authors:Li, T.H, Guo, H.T, Ji, X.Y.
Deposit date:2021-11-12
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SHP2 allosteric inhibitor TK-453 alleviates psoriasis-like skin inflammation in mice via inhibition of IL-23/Th17 axis.
Iscience, 25, 2022
3GK2
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BU of 3gk2 by Molmil
X-ray structure of bovine SBi279,Ca(2+)-S100B
Descriptor: (Z)-2-[2-(4-methylpiperazin-1-yl)benzyl]diazenecarbothioamide, CACODYLATE ION, CALCIUM ION, ...
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
3GK4
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BU of 3gk4 by Molmil
X-ray structure of bovine SBi523,Ca(2+)-S100B
Descriptor: CALCIUM ION, Protein S100-B, ethyl 5-{[(1R)-1-(ethoxycarbonyl)-2-oxopropyl]sulfanyl}-1,2-dihydro[1,2,3]triazolo[1,5-a]quinazoline-3-carboxylate
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
3GK1
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BU of 3gk1 by Molmil
X-ray structure of bovine SBi132,Ca(2+)-S100B
Descriptor: 2-[(5-hex-1-yn-1-ylfuran-2-yl)carbonyl]-N-methylhydrazinecarbothioamide, CACODYLATE ION, CALCIUM ION, ...
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
1ODL
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BU of 1odl by Molmil
PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS
Descriptor: CHLORIDE ION, GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE, ...
Authors:Tahirov, T.H, Inagaki, E, Miyano, M.
Deposit date:2003-02-19
Release date:2003-02-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
2HBJ
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BU of 2hbj by Molmil
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain
Descriptor: Exosome complex exonuclease RRP6
Authors:Midtgaard, S.F, Assenholt, J, Jonstrup, A.T, Van, L.B, Jensen, T.H, Brodersen, D.E.
Deposit date:2006-06-14
Release date:2006-07-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3H9B
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BU of 3h9b by Molmil
Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with azidonorleucine
Descriptor: 6-azido-L-norleucine, CITRIC ACID, Methionyl-tRNA synthetase, ...
Authors:Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y.
Deposit date:2009-04-30
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.
J.Mol.Biol., 394, 2009
3H7W
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BU of 3h7w by Molmil
Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains with the artificial ligand THS017
Descriptor: 2-nitro-N-(thiophen-3-ylmethyl)-4-(trifluoromethyl)aniline, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
Authors:Key, J.M, Scheuermann, T.H, Anderson, P.C, Daggett, V, Gardner, K.H.
Deposit date:2009-04-28
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Principles of ligand binding within a completely buried cavity in HIF2alpha PAS-B
J.Am.Chem.Soc., 131, 2009
3WDY
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BU of 3wdy by Molmil
The complex structure of E113A with cellotetraose
Descriptor: Beta-1,3-1,4-glucanase, SULFATE ION, beta-D-glucopyranose, ...
Authors:Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
1G55
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BU of 1g55 by Molmil
Structure of human DNMT2, an enigmatic DNA methyltransferase homologue
Descriptor: BETA-MERCAPTOETHANOL, DNA CYTOSINE METHYLTRANSFERASE DNMT2, GLYCEROL, ...
Authors:Dong, A, Yoder, J.A, Zhang, X, Zhou, L, Bestor, T.H, Cheng, X.
Deposit date:2000-10-30
Release date:2001-01-17
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human DNMT2, an enigmatic DNA methyltransferase homolog that displays denaturant-resistant binding to DNA.
Nucleic Acids Res., 29, 2001
3WDT
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BU of 3wdt by Molmil
The apo-form structure of PtLic16A from Paecilomyces thermophila
Descriptor: Beta-1,3-1,4-glucanase, SULFATE ION
Authors:Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
3WDU
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BU of 3wdu by Molmil
The complex structure of PtLic16A with cellobiose
Descriptor: Beta-1,3-1,4-glucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
3WH9
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The ligand-free structure of ManBK from Aspergillus niger BK01
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Huang, J.W, Chen, C.C, Huang, C.H, Huang, T.Y, Wu, T.H, Cheng, Y.S, Ko, T.P, Lin, C.Y, Liu, J.R, Guo, R.T.
Deposit date:2013-08-22
Release date:2014-10-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Analysis and Rational Design to Improve Specific Activity of beta-Mannanase from Aspergillus Niger BK01
To be Published
3WP5
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BU of 3wp5 by Molmil
The crystal structure of mutant CDBFV E109A from Neocallimastix patriciarum
Descriptor: CDBFV
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
2FF0
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BU of 2ff0 by Molmil
Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
Descriptor: CTGTGGCCCTGAGCC, GGCTCAGGGCCACAG, Steroidogenic factor 1, ...
Authors:Little, T.H, Zhang, Y, Matulis, C.K, Weck, J, Zhang, Z, Ramachandran, A, Mayo, K.E, Radhakrishnan, I.
Deposit date:2005-12-17
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Sequence-specific deoxyribonucleic Acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability.
Mol.Endocrinol., 20, 2006
3WDW
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BU of 3wdw by Molmil
The apo-form structure of E113A from Paecilomyces thermophila
Descriptor: Beta-1,3-1,4-glucanase, SULFATE ION
Authors:Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
1D3H
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BU of 1d3h by Molmil
HUMAN DIHYDROOROTATE DEHYDROGENASE COMPLEXED WITH ANTIPROLIFERATIVE AGENT A771726
Descriptor: (2Z)-2-cyano-3-hydroxy-N-[4-(trifluoromethyl)phenyl]but-2-enamide, ACETATE ION, DIHYDROOROTATE DEHYDROGENASE, ...
Authors:Liu, S, Neidhardt, E.A, Grossman, T.H, Ocain, T, Clardy, J.
Deposit date:1999-09-29
Release date:2000-08-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of human dihydroorotate dehydrogenase in complex with antiproliferative agents.
Structure Fold.Des., 8, 2000

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