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PDB: 197 results

5XP9
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BU of 5xp9 by Molmil
Crystal structure of Bismuth bound NDM-1
Descriptor: Bismuth(III) ION, GLYCEROL, Metallo-beta-lactamase type 2
Authors:Zhang, H, Ma, G, Lai, T.P, Sun, H.
Deposit date:2017-06-01
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Bismuth antimicrobial drugs serve as broad-spectrum metallo-beta-lactamase inhibitors
Nat Commun, 9, 2018
5H52
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BU of 5h52 by Molmil
Structure of Titanium-bound human serum transferrin
Descriptor: CITRIC ACID, MALONATE ION, Serotransferrin, ...
Authors:Curtin, J.P, Wang, M, Sun, H.
Deposit date:2016-11-04
Release date:2017-11-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:The role of citrate, lactate and transferrin in determining titanium release from surgical devices into human serum.
J. Biol. Inorg. Chem., 23, 2018
4H0W
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BU of 4h0w by Molmil
Bismuth bound human serum transferrin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bismuth(III) ION, CARBONATE ION, ...
Authors:Yang, N, Zhang, H, Wang, M, Hao, Q, Sun, H.
Deposit date:2012-09-10
Release date:2012-12-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Iron and bismuth bound human serum transferrin reveals a partially-opened conformation in the N-lobe.
Sci Rep, 2, 2012
5Z3W
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BU of 5z3w by Molmil
Malate dehydrogenase binds silver at C113
Descriptor: Malate dehydrogenase, SILVER ION
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2018-01-09
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Atomic differentiation of silver binding preference in protein targets: Escherichia coli malate dehydrogenase as a paradigm
Chem Sci, 2020
5Y6K
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BU of 5y6k by Molmil
Human serum trnasferrin bound to a fluorescent probe
Descriptor: (2S)-6-[2-(7-azido-4-methyl-2-oxidanylidene-chromen-3-yl)ethanoylamino]-2-[bis(2-hydroxy-2-oxoethyl)amino]hexanoic acid, FE (III) ION, MALONATE ION, ...
Authors:Jiang, N, Cheng, T, Wang, M, Chan, G.C.F, Jin, L, Li, H, Sun, H.
Deposit date:2017-08-12
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Tracking iron-associated proteomes in pathogens by a fluorescence approach.
Metallomics, 10, 2018
6BNS
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BU of 6bns by Molmil
STRUCTURE OF HUMAN PREGNANE X RECEPTOR LIGAND BINDING DOMAIN BOUND TETHERED WITH SRC co-activator peptide and Compound 25a AKA BICYCLIC HEXAFLUOROISOPROPYL 2 ALCOHOL SULFONAMIDES
Descriptor: 2-[(2S)-4-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)-3,4-dihydro-2H-1,4-benzothiazin-2-yl]-N-(2-hydroxy-2-methylpropyl)acetamide, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 Chimera
Authors:DHAR, T.G, GONG, H, WEINSTEIN, D.S, LU, Z, DUAN, J.J.W, STACHURA, S, HAQUE, L, KARMAKAR, A, HEMAGIRI, H, RAUT, D.K, GUPTA, A.K, KHAN, J.A, SACK, J.S, CAMAC, D.M, PUDZIANOWSKI, A.A, WU, D.R, YARDE, M, SHEN, D.R, BOROWSKI, V, XIE, J.H, SUN, H, ARIENZO, C.D, DABROS, M, GALELLA, M.A, WANG, F, WEIGELT, C.A, ZHAO, Q, FOSTER, W, SOMERVILLE, J.E, SALTER-CID, L.M, BARRISH, J.C, CARTER, P.H.
Deposit date:2017-11-17
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Identification of bicyclic hexafluoroisopropyl alcohol sulfonamides as retinoic acid receptor-related orphan receptor gamma (ROR gamma /RORc) inverse agonists. Employing structure-based drug design to improve pregnane X receptor (PXR) selectivity.
Bioorg. Med. Chem. Lett., 28, 2018
5X5S
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BU of 5x5s by Molmil
Ligand induced structure of AmyP-SBD
Descriptor: Amylase
Authors:Li, X, Yu, J, Sun, H, Zhang, X.
Deposit date:2017-02-17
Release date:2017-04-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ligand binding induced folding of a novel CBM69 starch binding domain
To Be Published
2KI5
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BU of 2ki5 by Molmil
HERPES SIMPLEX TYPE-1 THYMIDINE KINASE IN COMPLEX WITH THE DRUG ACICLOVIR AT 1.9A RESOLUTION
Descriptor: 9-HYROXYETHOXYMETHYLGUANINE, PROTEIN (THYMIDINE KINASE), SULFATE ION
Authors:Bennett, M.S, Wien, F, Champness, J.N, Batuwangala, T, Rutherford, T, Summers, W.C, Sun, H, Wright, G, Sanderson, M.R.
Deposit date:1999-02-12
Release date:1999-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure to 1.9 A resolution of a complex with herpes simplex virus type-1 thymidine kinase of a novel, non-substrate inhibitor: X-ray crystallographic comparison with binding of aciclovir.
FEBS Lett., 443, 1999
5Y2V
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BU of 5y2v by Molmil
Strcutrue of the full-length CcmR complexed with 2-OG from Synechocystis PCC6803
Descriptor: 2-OXOGLUTARIC ACID, PHOSPHATE ION, Rubisco operon transcriptional regulator
Authors:Jiang, Y.L, Wang, X.P, Sun, H, Cheng, W, Han, S.J, Li, W.F, Chen, Y, Zhou, C.Z.
Deposit date:2017-07-27
Release date:2017-12-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Coordinating carbon and nitrogen metabolic signaling through the cyanobacterial global repressor NdhR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5Y2W
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BU of 5y2w by Molmil
Structure of Synechocystis PCC6803 CcmR regulatory domain in complex with 2-PG
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Rubisco operon transcriptional regulator
Authors:Jiang, Y.L, Wang, X.P, Sun, H, Cheng, W, Cao, D.D, Han, S.J, Li, W.F, Chen, Y, Zhou, C.Z.
Deposit date:2017-07-27
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Coordinating carbon and nitrogen metabolic signaling through the cyanobacterial global repressor NdhR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4O0I
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BU of 4o0i by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with 2'-MeSe-arabino-guanosine derivatized DNA
Descriptor: 5'-D(*C*(1TW)P*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', DNA polymerase I, GLYCEROL, ...
Authors:Jiang, S, Gan, J, Sun, H, Huang, Z.
Deposit date:2013-12-13
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with 2'-MeSe-arabino-guanosine derivatized DNA
TO BE PUBLISHED
4QY0
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BU of 4qy0 by Molmil
Structure of H10 from human-infecting H10N8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, hemagglutinin
Authors:Wang, M, Zhang, W, Qi, J, Wang, F, Zhou, J, Bi, Y, Wu, Y, Sun, H, Liu, J, Huang, C, Li, X, Yan, J, Shu, Y, Shi, Y, Gao, G.F.
Deposit date:2014-07-23
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus
Nat Commun, 6, 2015
8GTD
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BU of 8gtd by Molmil
Cryo-EM model of the marine siphophage vB_DshS-R4C portal-adaptor complex
Descriptor: Head-to-tail joining protein, Portal protein
Authors:Huang, Y, Sun, H, Wei, S, Zheng, Q, Li, S, Zhang, R, Xia, N.
Deposit date:2022-09-08
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structure and proposed DNA delivery mechanism of a marine roseophage.
Nat Commun, 14, 2023
8GTF
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BU of 8gtf by Molmil
Cryo-EM model of the marine siphophage vB_DshS-R4C stopper-terminator complex
Descriptor: Head-to-tail joining protein, Major tail protein, Terminator protein
Authors:Huang, Y, Sun, H, Wei, S, Zheng, Q, Li, S, Zhang, R, Xia, N.
Deposit date:2022-09-08
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structure and proposed DNA delivery mechanism of a marine roseophage.
Nat Commun, 14, 2023
8GTB
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BU of 8gtb by Molmil
Cryo-EM structure of the marine siphophage vB_DshS-R4C tail tube protein
Descriptor: Major tail protein
Authors:Huang, Y, Sun, H, Wei, S, Zheng, Q, Li, S, Zhang, R, Xia, N.
Deposit date:2022-09-08
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Structure and proposed DNA delivery mechanism of a marine roseophage.
Nat Commun, 14, 2023
8GTC
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BU of 8gtc by Molmil
Cryo-EM model of the marine siphophage vB_DshS-R4C baseplate-tail complex
Descriptor: Distal tail protein, Hub protein, Major tail protein, ...
Authors:Huang, Y, Sun, H, Wei, S, Zheng, Q, Li, S, Zhang, R, Xia, N.
Deposit date:2022-09-08
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure and proposed DNA delivery mechanism of a marine roseophage.
Nat Commun, 14, 2023
3S49
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BU of 3s49 by Molmil
RNA crystal structure with 2-Se-uridine modification
Descriptor: POTASSIUM ION, RNA (5'-R(*GP*UP*AP*UP*AP*(RUS)P*AP*C)-3')
Authors:Sheng, J, Gan, J, Sun, H, Hassan, A.E.H, Jiang, S, Huang, Z.
Deposit date:2011-05-19
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Higher Specificity of RNA Base Pairing with 2-Selenouridine
To be Published
5Z49
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BU of 5z49 by Molmil
Crystal structure of the effector-binding domain of Synechococcus elongatus CmpR in complex with ribulose-1,5-bisphosphate
Descriptor: HTH-type transcriptional activator CmpR, RIBULOSE-1,5-DIPHOSPHATE
Authors:Jiang, Y.L, Mahounga, D.M, Sun, H.
Deposit date:2018-01-10
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Crystal structure of the effector-binding domain of Synechococcus elongatus CmpR in complex with ribulose 1,5-bisphosphate.
Acta Crystallogr F Struct Biol Commun, 74, 2018
4FZX
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BU of 4fzx by Molmil
Exonuclease X in complex with 3' overhanging duplex DNA
Descriptor: DNA (5'-D(P*CP*GP*GP*AP*TP*CP*CP*AP*CP*AP*AP*TP*GP*AP*CP*CP*T)-3'), DNA (5'-D(P*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, ...
Authors:Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T.
Deposit date:2012-07-08
Release date:2013-07-03
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
Nucleic Acids Res., 41, 2013
6LHE
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BU of 6lhe by Molmil
Crystal Structure of Gold-bound NDM-1
Descriptor: GOLD ION, Metallo-beta-lactamase type 2, SULFATE ION
Authors:Wang, H, Sun, H, Wang, M.
Deposit date:2019-12-07
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.206 Å)
Cite:Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
4FZZ
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BU of 4fzz by Molmil
Exonuclease X in complex with 5' overhanging duplex DNA
Descriptor: DNA (5'-D(*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, SODIUM ION
Authors:Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T.
Deposit date:2012-07-08
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
Nucleic Acids Res., 41, 2013
4FZY
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BU of 4fzy by Molmil
Exonuclease X in complex with 12bp blunt-ended dsDNA
Descriptor: DNA (5'-D(*TP*GP*TP*AP*GP*AP*TP*TP*CP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*GP*AP*AP*TP*CP*TP*AP*CP*A)-3'), Exodeoxyribonuclease 10, ...
Authors:Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T.
Deposit date:2012-07-08
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
Nucleic Acids Res., 41, 2013
6LI6
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BU of 6li6 by Molmil
Crystal structure of MCR-1-S treated by Au(PEt3)Cl
Descriptor: GOLD ION, Probable phosphatidylethanolamine transferase Mcr-1, TRIETHYLPHOSPHANE
Authors:Zhang, Q, Wang, M, Sun, H.
Deposit date:2019-12-10
Release date:2020-09-16
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
6LI4
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BU of 6li4 by Molmil
Crystal structure of MCR-1-S
Descriptor: Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION
Authors:Zhang, Q, Wang, M, Sun, H.
Deposit date:2019-12-10
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
6LI5
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BU of 6li5 by Molmil
Crystal structure of apo-MCR-1-S
Descriptor: Probable phosphatidylethanolamine transferase Mcr-1
Authors:Zhang, Q, Wang, M, Sun, H.
Deposit date:2019-12-10
Release date:2020-09-16
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020

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