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PDB: 25 results

6LR3
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Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum
Descriptor: Macrophage migration inhibitory factor, SULFATE ION
Authors:Su, Z.M, Tian, X.Y, Li, H.J, Wei, Z.M, Chen, L.F, Ren, H.X, Peng, W.F, Tang, C.T.
Deposit date:2020-01-15
Release date:2020-07-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum.
Biochem.J., 477, 2020
6LKV
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BU of 6lkv by Molmil
Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum
Descriptor: CHLORIDE ION, Macrophage migration inhibitory factor, SULFATE ION
Authors:Su, Z.M, Tian, X.Y, Li, H.J, Wei, Z.M, Chen, L.F, Ren, H.X, Peng, W.F, Tang, C.T.
Deposit date:2019-12-20
Release date:2020-07-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum.
Biochem.J., 477, 2020
6LKW
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BU of 6lkw by Molmil
Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum
Descriptor: CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Su, Z.M, Tian, X.Y, Li, H.J, Wei, Z.M, Chen, L.F, Ren, H.X, Peng, W.F, Tang, C.T.
Deposit date:2019-12-20
Release date:2020-07-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum.
Biochem.J., 477, 2020
8JBE
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BU of 8jbe by Molmil
CryoEM Structure of metazoan Mon1-Ccz1-RMC1 complex
Descriptor: Caffeine, calcium, zinc sensitivity 1, ...
Authors:Jia, G.W, Yong, X, Su, Z.M, Jia, D.
Deposit date:2023-05-08
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:CryoEM Structure of metazoan Mon1-Ccz1-RMC1 complex
To Be Published
7EW0
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BU of 7ew0 by Molmil
Cryo-EM structure of ozanimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
Descriptor: 5-[3-[(1~{S})-1-(2-hydroxyethylamino)-2,3-dihydro-1~{H}-inden-4-yl]-1,2,4-oxadiazol-5-yl]-2-propan-2-yloxy-benzenecarbonitrile, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yuan, Y, Jia, G.W, Su, Z.M, Shao, Z.H.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EW7
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BU of 7ew7 by Molmil
Cryo-EM structure of SEW2871-bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
Descriptor: 5-[4-phenyl-5-(trifluoromethyl)thiophen-2-yl]-3-[3-(trifluoromethyl)phenyl]-1,2,4-oxadiazole, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Jia, G.W, Yuan, Y, Su, Z.M, Shao, Z.H.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EW1
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BU of 7ew1 by Molmil
Cryo-EM structure of siponimod -bound Sphingosine-1-phosphate receptor 5 in complex with Gi protein
Descriptor: 1-[[4-[(~{E})-~{N}-[[4-cyclohexyl-3-(trifluoromethyl)phenyl]methoxy]-~{C}-methyl-carbonimidoyl]-2-ethyl-phenyl]methyl]azetidine-3-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yuan, Y, Jia, G.W, Shao, Z.H, Su, Z.M.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EVZ
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BU of 7evz by Molmil
Cryo-EM structure of cenerimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
Descriptor: (2~{S})-3-[4-[5-(2-cyclopentyl-6-methoxy-pyridin-4-yl)-1,2,4-oxadiazol-3-yl]-2-ethyl-6-methyl-phenoxy]propane-1,2-diol, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yuan, Y, Jia, G.W, Shao, Z.H, Su, Z.M.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EVY
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BU of 7evy by Molmil
Cryo-EM structure of siponimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
Descriptor: 1-[[4-[(~{E})-~{N}-[[4-cyclohexyl-3-(trifluoromethyl)phenyl]methoxy]-~{C}-methyl-carbonimidoyl]-2-ethyl-phenyl]methyl]azetidine-3-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Jia, G.W, Yuan, Y, Su, Z.M, Shao, Z.H.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7XAQ
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BU of 7xaq by Molmil
Cryo-EM structure of PvrA-DNA complex
Descriptor: Probable transcriptional regulator, fadD1
Authors:Zhu, Y.B, Su, Z.M, Bao, R.
Deposit date:2022-03-18
Release date:2023-04-26
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:The Pseudomonas aeruginosa regulator PvrA binds cooperatively to multiple pseudo-palindromic sites to efficiently stimulate target gene
To be published
9ISV
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BU of 9isv by Molmil
Enterococcus faecalis ROOL RNA monomer
Descriptor: RNA (580-MER)
Authors:Wang, L, Xie, J.H, Su, Z.M.
Deposit date:2024-07-18
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9J6Y
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BU of 9j6y by Molmil
Lactobacillus salivarius ROOL RNA hexamer
Descriptor: MAGNESIUM ION, RNA (550-MER)
Authors:Wang, L, Xie, J.H, Shang, S.T, Su, Z.M.
Deposit date:2024-08-17
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9J3R
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BU of 9j3r by Molmil
Enterococcus faecalis ROOL RNA tetramer
Descriptor: RNA (580-MER)
Authors:Wang, L, Xie, J.H, Shang, S.T, Su, Z.M.
Deposit date:2024-08-08
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (4.72 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9J3T
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BU of 9j3t by Molmil
Enterococcus faecalis ROOL RNA octamer
Descriptor: RNA (580-MER)
Authors:Wang, L, Xie, J.H, Shang, S.T, Su, Z.M.
Deposit date:2024-08-08
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9KPO
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BU of 9kpo by Molmil
Fusobacterium nucleatum ARRPOF RNA dimer conformation 1
Descriptor: RNA (255-MER)
Authors:Tu, Y.F, Shang, S.T, Su, Z.M.
Deposit date:2024-11-23
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9KPH
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BU of 9kph by Molmil
Fusobacterium nucleatum ARRPOF RNA dimer conformation 2
Descriptor: RNA (255-MER)
Authors:Tu, Y.F, Shang, S.T, Su, Z.M.
Deposit date:2024-11-22
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
9LCR
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BU of 9lcr by Molmil
Clostridium botulinum OLE RNA dimer
Descriptor: MAGNESIUM ION, RNA (578-MER)
Authors:Jia, X.Y, Wang, L, Su, Z.M.
Deposit date:2025-01-05
Release date:2025-03-19
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM reveals mechanisms of natural RNA multivalency.
Science, 2025
8IYX
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BU of 8iyx by Molmil
Cryo-EM structure of the GPR34 receptor in complex with the antagonist YL-365
Descriptor: 1-[4-(3-chlorophenyl)phenyl]carbonyl-4-[2-(4-phenylmethoxyphenyl)ethanoylamino]piperidine-4-carboxylic acid, Probable G-protein coupled receptor 34,Probable G-protein coupled receptor 34,YL-365
Authors:Jia, G.W, Wang, X, Zhang, C.B, Dong, H.H, Su, Z.M.
Deposit date:2023-04-06
Release date:2024-03-20
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structures of human GPR34 enable the identification of selective antagonists.
Proc.Natl.Acad.Sci.USA, 120, 2023
6LKA
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BU of 6lka by Molmil
Crystal Structure of EV71-3C protease with a Novel Macrocyclic Compounds
Descriptor: 3C proteinase, ~{N}-[(2~{S})-1-[[(2~{S},3~{S},6~{S},7~{Z},12~{E})-4,9-bis(oxidanylidene)-6-[[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]methyl]-2-phenyl-1,10-dioxa-5-azacyclopentadeca-7,12-dien-3-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]-5-methyl-1,2-oxazole-3-carboxamide
Authors:Li, P, Wu, S.Q, Xiao, T.Y.C, Li, Y.L, Su, Z.M, Hao, F, Hu, G.P, Hu, J, Lin, F.S, Chen, X.S, Gu, Z.X, He, H.Y, Li, J, Chen, S.H.
Deposit date:2019-12-18
Release date:2020-06-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Design, synthesis, and evaluation of a novel macrocyclic anti-EV71 agent.
Bioorg.Med.Chem., 28, 2020
8Z9M
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BU of 8z9m by Molmil
Cryo-EM structure of dimeric WDR11-FAM91A1 complex
Descriptor: Protein FAM91A1, WD repeat-containing protein 11
Authors:Jia, G.W, Deng, Q.H, Su, Z.M, Jia, D.
Deposit date:2024-04-23
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The WDR11 complex is a receptor for acidic-cluster-containing cargo proteins.
Cell, 187, 2024
8XFB
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BU of 8xfb by Molmil
Cryo-EM structure of partial dimeric WDR11-FAM91A1 complex
Descriptor: Protein FAM91A1, WD repeat-containing protein 11
Authors:Jia, G.W, Deng, Q.H, Su, Z.M, Jia, D.
Deposit date:2023-12-13
Release date:2024-08-14
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The WDR11 complex is a receptor for acidic-cluster-containing cargo proteins.
Cell, 187, 2024
8Y0Y
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BU of 8y0y by Molmil
Cryo-EM structure of the 123-316 scDb/PT-RBD complex
Descriptor: 123-316 scDb, 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Jia, G.W, Tong, Z, Tong, J.Y, Su, Z.M.
Deposit date:2024-01-23
Release date:2024-07-17
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
8XTP
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BU of 8xtp by Molmil
Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (133-MER), ...
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 2025
8XTQ
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BU of 8xtq by Molmil
Comamonas testosteroni KF-1 circularly permuted group II intron 1S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (808-MER)
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 2025
8XTS
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BU of 8xts by Molmil
Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (814-MER)
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 2025

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PDB entries from 2025-04-02

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