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PDB: 281 results

4WZ0
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BU of 4wz0 by Molmil
Crystal structure of U-box 1 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris
Descriptor: E3 ubiquitin-protein ligase LubX
Authors:Stogios, P.J, Quaile, A.T, Skarina, T, Stein, A, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-14
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
3M5B
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BU of 3m5b by Molmil
Crystal structure of the BTB domain from FAZF/ZBTB32
Descriptor: Zinc finger and BTB domain-containing protein 32
Authors:Stogios, P.J, Pomroy, N.C, Prive, G.G.
Deposit date:2010-03-12
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Strand Exchange in BTB Domain Dimers from the Crystal Structures of FAZF and Miz1.
J.Mol.Biol., 400, 2010
6MIJ
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BU of 6mij by Molmil
Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP
Descriptor: Elongation factor Tu, FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-19
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:To be published
To Be Published
6C8Q
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BU of 6c8q by Molmil
Crystal structure of NAD synthetase (NadE) from Enterococcus faecalis in complex with NAD+
Descriptor: NH(3)-dependent NAD(+) synthetase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Stogios, P.J, Skarina, T, McChesney, C, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-01-25
Release date:2018-02-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.583 Å)
Cite:To be published
To Be Published
4EXL
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BU of 4exl by Molmil
Crystal structure of phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A
Descriptor: CHLORIDE ION, MAGNESIUM ION, Phosphate-binding protein pstS 1
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A
To be Published
7S2M
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BU of 7s2m by Molmil
Crystal structure of sulfonamide resistance enzyme Sul3 in complex with 6-hydroxymethylpterin
Descriptor: 6-HYDROXYMETHYLPTERIN, Sul3
Authors:Stogios, P.J, Skarina, T, Venkatesan, M, Michalska, K, Mesa, N, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-09-03
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
7S2K
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BU of 7s2k by Molmil
Crystal structure of sulfonamide resistance enzyme Sul2 in complex with 7,8-dihydropteroate, magnesium, and pyrophosphate
Descriptor: 4-AMINOBENZOIC ACID, 7,8-DIHYDROPTEROATE, CHLORIDE ION, ...
Authors:Stogios, P.J, Skarina, T, Michalska, K, Venkatesan, M, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-09-03
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
6BND
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BU of 6bnd by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, Thr315Ala mutant mono-zinc and phosphoethanolamine complex
Descriptor: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, POLYETHYLENE GLYCOL (N=34), Phosphoethanolamine transferase, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Substrate Recognition by a Colistin Resistance Enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 13, 2018
6BNE
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BU of 6bne by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, phosphate-bound complex
Descriptor: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Substrate recognition by a colistin resistance enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 2018
6D33
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BU of 6d33 by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-04-14
Release date:2019-10-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
6BNF
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BU of 6bnf by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, mono-zinc complex
Descriptor: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Substrate recognition by a colistin resistance enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 2018
4H5F
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BU of 4h5f by Molmil
Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ARGININE, ...
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-09-18
Release date:2012-10-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1
TO BE PUBLISHED
6ALL
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BU of 6all by Molmil
Crystal structure of a predicted ferric/iron (III) hydroxymate siderophore substrate binding protein from Bacillus anthracis
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Fe(3+)-citrate-binding protein yfmC
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-08-08
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of a predicted ferric/iron (III) hydroxymate siderophore substrate binding protein from Bacillus anthracis
To Be Published
4O8P
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BU of 4o8p by Molmil
Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, bound to xylotetraose
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Alpha-L-arabinofuranosidase, CALCIUM ION, ...
Authors:Stogios, P.J, Wang, W, Xu, X, Cui, H, Master, E, Savchenko, A.
Deposit date:2013-12-28
Release date:2014-07-02
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.557 Å)
Cite:Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus.
Appl.Environ.Microbiol., 80, 2014
6B5F
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BU of 6b5f by Molmil
Crystal structure of nicotinate mononucleotide-5,6-dimethylbenzimidazole phosphoribosyltransferase CobT from Yersinia enterocolitica
Descriptor: CHLORIDE ION, GLYCEROL, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, ...
Authors:Stogios, P.J, Skarina, T, McChesney, C, Grimshaw, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-09-29
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of nicotinate mononucleotide-5,6-dimethylbenzimidazole phosphoribosyltransferase CobT from Yersinia enterocolitica
To Be Published
4QL5
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BU of 4ql5 by Molmil
Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4
Descriptor: ACETATE ION, GLYCEROL, Translation initiation factor IF-1, ...
Authors:Stogios, P.J, Wawrzak, Z, Onopriyenko, O, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-06-10
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.025 Å)
Cite:Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4
TO BE PUBLISHED
4R01
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BU of 4r01 by Molmil
Crystal structure of SP1627, a putative NADH-flavin reductase, from Streptococcus pneumoniae TIGR4
Descriptor: CHLORIDE ION, SULFATE ION, putative NADH-flavin reductase
Authors:Stogios, P.J, Onopriyenko, O, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-07-29
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of SP1627, a putative NADH-flavin reductase, from Streptococcus pneumoniae TIGR4
TO BE PUBLISHED
4O8N
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BU of 4o8n by Molmil
Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, in the apoprotein form
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-L-arabinofuranosidase, CALCIUM ION, ...
Authors:Stogios, P.J, Wang, W, Xu, X, Cui, H, Master, E, Savchenko, A.
Deposit date:2013-12-28
Release date:2014-07-02
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.6476 Å)
Cite:Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus.
Appl.Environ.Microbiol., 80, 2014
6CD7
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BU of 6cd7 by Molmil
Crystal structure of APH(2")-IVa in complex with plazomicin
Descriptor: (2S)-4-amino-N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-y l]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]-2-hydroxybutanamide, APH(2'')-Id, CHLORIDE ION
Authors:Stogios, P.J, Evdokimova, E, Dong, A, Di Leo, R, Savchenko, A, Satchell, K.J, Joachimiak, J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-02-08
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Plazomicin Retains Antibiotic Activity against Most Aminoglycoside Modifying Enzymes.
ACS Infect Dis, 4, 2018
7V09
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BU of 7v09 by Molmil
Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
Descriptor: MAGNESIUM ION, Multiple sugar transport system periplasmic sugar-binding protein
Authors:Stogios, P.J, Skarina, T, Mesa, N, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-05-10
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
To Be Published
4H5G
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BU of 4h5g by Molmil
Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 2
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ARGININE, ...
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-09-18
Release date:2012-10-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 2
TO BE PUBLISHED
5VU3
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BU of 5vu3 by Molmil
Crystal structure of the competence-damaged protein (CinA) superfamily protein ECL_02051 from Enterobacter cloacae
Descriptor: ACETATE ION, Competence damage-inducible protein A, TETRAETHYLENE GLYCOL
Authors:Stogios, P.J, Skarina, T, McChesney, C, Sandoval, J, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-05-18
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.868 Å)
Cite:Crystal structure of the competence-damaged protein (CinA) superfamily protein ECL_02051 from Enterobacter cloacae
To Be Published
3PF9
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BU of 3pf9 by Molmil
Crystal structure of the Lactobacillus johnsonii cinnamoyl esterase LJ0536 S106A mutant
Descriptor: Cinnamoyl esterase, SODIUM ION
Authors:Stogios, P.J, Lai, K.K, Vu, C, Xu, X, Cui, H, Molloy, S, Gonzalez, C.F, Yakunin, A, Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3PF8
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BU of 3pf8 by Molmil
Crystal structure of the Lactobacillus johnsonii cinnamoyl esterase LJ0536
Descriptor: Cinnamoyl esterase, SODIUM ION
Authors:Stogios, P.J, Lai, K.K, Vu, C, Xu, X, Cui, H, Molloy, S, Gonzalez, C.F, Yakunin, A, Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
4I62
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BU of 4i62 by Molmil
1.05 Angstrom crystal structure of an amino acid ABC transporter substrate-binding protein AbpA from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine
Descriptor: ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein, ...
Authors:Stogios, P.J, Kudritska, M, Wawrzak, Z, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-11-29
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:1.05 Angstrom crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine
To be Published

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