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PDB: 117 results

2PMC
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BU of 2pmc by Molmil
Crystal Structure of CheY-Mg(2+) in Complex with CheZ(C15) Peptide solved from a P1 Crystal
Descriptor: Chemotaxis protein cheY, Chemotaxis protein cheZ, MAGNESIUM ION
Authors:Guhaniyogi, J, Stock, A.M.
Deposit date:2007-04-20
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.688 Å)
Cite:Interaction of CheY with the C-terminal peptide of CheZ.
J.Bacteriol., 190, 2008
4G4K
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BU of 4g4k by Molmil
Structure of the Staphylococcus aureus AgrA LytTR Domain
Descriptor: Accessory gene regulator protein A, GLYCEROL
Authors:Leonard, P.G, Bezar, I.F, Stock, A.M.
Deposit date:2012-07-16
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identification of a Hydrophobic Cleft in the LytTR Domain of AgrA as a Locus for Small Molecule Interactions That Inhibit DNA Binding.
Biochemistry, 51, 2012
1XHE
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BU of 1xhe by Molmil
Crystal structure of the receiver domain of redox response regulator arca
Descriptor: Aerobic respiration control protein arcA
Authors:Toro-Roman, A, Mack, T.R, Stock, A.M.
Deposit date:2004-09-18
Release date:2005-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analysis and Solution Studies of the Activated Regulatory Domain of the Response Regulator ArcA: A Symmetric Dimer Mediated by the alpha4-beta5-alpha5 Face
J.Mol.Biol., 349, 2005
1XHF
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Crystal structure of the bef3-activated receiver domain of redox response regulator arca
Descriptor: Aerobic respiration control protein arcA, BERYLLIUM DIFLUORIDE, BERYLLIUM TETRAFLUORIDE ION, ...
Authors:Toro-Roman, A, Mack, T.R, Stock, A.M.
Deposit date:2004-09-18
Release date:2005-05-17
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Structural Analysis and Solution Studies of the Activated Regulatory Domain of the Response Regulator ArcA: A Symmetric Dimer Mediated by the alpha4-beta5-alpha5 Face
J.Mol.Biol., 349, 2005
4GVP
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BU of 4gvp by Molmil
Crystal Structure of the Response Regulator Protein VraR from Staphylococcus aureus
Descriptor: Response regulator protein vraR
Authors:Leonard, P.G, Stock, A.M.
Deposit date:2012-08-31
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation.
Proc.Natl.Acad.Sci.USA, 110, 2013
1ZH2
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BU of 1zh2 by Molmil
Crystal Structure Of The Calcium-Bound Receiver Domain Of Kdp Potassium Transport System Response Regulator KdpE
Descriptor: CALCIUM ION, KDP operon transcriptional regulatory protein kdpE
Authors:Toro-Roman, A, Wu, T, Stock, A.M.
Deposit date:2005-04-22
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A common dimerization interface in bacterial response regulators KdpE and TorR.
Protein Sci., 14, 2005
1ZGZ
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BU of 1zgz by Molmil
Crystal Structure Of The Receiver Domain Of TMAO Respiratory System Response Regulator TorR
Descriptor: GLYCEROL, SULFATE ION, TorCAD operon transcriptional regulatory protein torR
Authors:Toro-Roman, A, Wu, T, Stock, A.M.
Deposit date:2005-04-22
Release date:2005-12-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A common dimerization interface in bacterial response regulators KdpE and TorR.
Protein Sci., 14, 2005
1ZES
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BU of 1zes by Molmil
BeF3- activated PhoB receiver domain
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Phosphate regulon transcriptional regulatory protein phoB
Authors:Bachhawat, P, Montelione, G.T, Stock, A.M.
Deposit date:2005-04-19
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of Activation for Transcription Factor PhoB Suggested by Different Modes of Dimerization in the Inactive and Active States.
Structure, 13, 2005
1ZH4
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BU of 1zh4 by Molmil
Crystal Structure Of The Mg+2/BeF3-Bound Receiver Domain Of Kdp Potassium Transport System Response Regulator KdpE
Descriptor: BERYLLIUM TRIFLUORIDE ION, KDP operon transcriptional regulatory protein kdpE, MAGNESIUM ION
Authors:Toro-Roman, A, Wu, T, Stock, A.M.
Deposit date:2005-04-22
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A common dimerization interface in bacterial response regulators KdpE and TorR.
Protein Sci., 14, 2005
4GF8
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BU of 4gf8 by Molmil
Crystal Structure of the Chitin Oligasaccharide Binding Protein
Descriptor: Peptide ABC transporter, periplasmic peptide-binding protein, SULFATE ION
Authors:Xu, S, Li, X, Gu, L, Roseman, R, Stock, A.M.
Deposit date:2012-08-03
Release date:2013-08-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chitin catabolic cascade in the marine bacterium Vibrio cholerae: properties, structure and functions of a periplasmic chitooligosaccharide binding protein (CBP)
To be Published
1P2F
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BU of 1p2f by Molmil
Crystal Structure Analysis of Response Regulator DrrB, a Thermotoga maritima OmpR/PhoB Homolog
Descriptor: Response Regulator
Authors:Robinson, V.L, Wu, T, Stock, A.M.
Deposit date:2003-04-15
Release date:2003-04-29
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily
J.Bacteriol., 185, 2003
1DZ4
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BU of 1dz4 by Molmil
ferric p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-16
Release date:2000-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1DZ8
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BU of 1dz8 by Molmil
oxygen complex of p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1DZ6
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BU of 1dz6 by Molmil
ferrous p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1DZ9
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BU of 1dz9 by Molmil
Putative oxo complex of P450cam from Pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-18
Release date:2000-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1MKY
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BU of 1mky by Molmil
Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Probable GTP-binding protein engA
Authors:Robinson, V.L, Hwang, J, Fox, E, Inouye, M, Stock, A.M.
Deposit date:2002-08-29
Release date:2003-01-14
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Domain Arrangement of Der, a Switch Protein Containing Two GTPase Domains
Structure, 10, 2002
4GFR
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BU of 4gfr by Molmil
Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, Peptide ABC transporter, ...
Authors:Xu, S, Li, X, Gu, L, Roseman, R, Stock, A.M.
Deposit date:2012-08-03
Release date:2013-08-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chitin catabolic cascade in the marine bacterium Vibrio cholerae: properties, structure and functions of a periplasmic chitooligosaccharide binding protein (CBP)
To be Published
1NEP
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BU of 1nep by Molmil
Crystal Structure Analysis of the Bovine NPC2 (Niemann-Pick C2) Protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Epididymal secretory protein E1, PHOSPHATE ION
Authors:Friedland, N, Liou, H.-L, Lobel, P, Stock, A.M.
Deposit date:2002-12-11
Release date:2003-01-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a Cholesterol-binding Protein Deficient in Niemann-Pick Type C2 Disease
Proc.Natl.Acad.Sci.USA, 100, 2003
4P7H
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BU of 4p7h by Molmil
Structure of Human beta-Cardiac Myosin Motor Domain::GFP chimera
Descriptor: Myosin-7,Green fluorescent protein, SULFATE ION
Authors:Winkelmann, D.A, Miller, M.T, Stock, A.M.
Deposit date:2014-03-27
Release date:2014-05-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of Human beta-Cardiac Myosin Motor Domain at 3.2 A
Mol. Biol. Cell, 2011
4PA0
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BU of 4pa0 by Molmil
Omecamtiv Mercarbil binding site on the Human Beta-Cardiac Myosin Motor Domain
Descriptor: GLYCEROL, Myosin-7,Green fluorescent protein, methyl 4-(2-fluoro-3-{[(6-methylpyridin-3-yl)carbamoyl]amino}benzyl)piperazine-1-carboxylate
Authors:Winkelmann, D.A, Miller, M.T, Stock, A.M.
Deposit date:2014-04-06
Release date:2015-07-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for drug-induced allosteric changes to human beta-cardiac myosin motor activity.
Nat Commun, 6, 2015
1TPW
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BU of 1tpw by Molmil
TRIOSEPHOSPHATE ISOMERASE DRINKS WATER TO KEEP HEALTHY
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Zhang, Z, Sugio, S, Komives, E.A, Liu, K.D, Stock, A.M, Narayana, N, Xuong, Ng.H, Knowles, J.R, Petsko, G.A, Ringe, D.
Deposit date:1994-11-07
Release date:1995-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The role of water in the catalytic efficiency of triosephosphate isomerase.
Biochemistry, 38, 1999
4GT8
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BU of 4gt8 by Molmil
Crystal Structure of the Catalytic and ATP-binding Domain from VraS in Complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sensor protein vraS
Authors:Leonard, P.G, Valverde, J, Stock, A.M.
Deposit date:2012-08-28
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure of the Staphylococcus aureus VraS Catalytic and ATP-binding Domain
To be Published
2HKA
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BU of 2hka by Molmil
Crystal structure of bovine NPC2 and cholesterol sulfate complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHOLEST-5-EN-3-YL HYDROGEN SULFATE, ...
Authors:Xu, S, Gu, L, Benoff, B, Stock, A.M.
Deposit date:2006-07-03
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural Basis of Sterol Binding by NPC2, a Lysosomal Protein Deficient in Niemann-Pick Type C2 Disease
J.Biol.Chem., 282, 2007
2GWR
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BU of 2gwr by Molmil
Crystal structure of the response regulator protein mtrA from Mycobacterium Tuberculosis
Descriptor: CALCIUM ION, DNA-binding response regulator mtrA, GLYCEROL
Authors:Friedland, N, Mack, T.R, Yu, M, Bursey, E.H, Hung, L.W, Stock, A.M, Waldo, G.S, Terwilliger, T.C.
Deposit date:2006-05-05
Release date:2006-05-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Domain orientation in the inactive response regulator Mycobacterium tuberculosis MtrA provides a barrier to activation.
Biochemistry, 46, 2007
1OPC
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BU of 1opc by Molmil
OMPR DNA-BINDING DOMAIN, ESCHERICHIA COLI
Descriptor: OMPR
Authors:Martinez-Hackert, E, Stock, A.M.
Deposit date:1996-12-16
Release date:1997-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The DNA-binding domain of OmpR: crystal structures of a winged helix transcription factor.
Structure, 5, 1997

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