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PDB: 300 results

4Q57
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BU of 4q57 by Molmil
Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
Deposit date:2014-04-16
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
To be Published
4Q58
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BU of 4q58 by Molmil
Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
Descriptor: Integrin beta-4, Plectin
Authors:Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
Deposit date:2014-04-16
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.001 Å)
Cite:Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
To be Published
4Q59
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BU of 4q59 by Molmil
Crystal structure of plectin 1a actin-binding domain
Descriptor: Plectin
Authors:Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
Deposit date:2014-04-16
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of plectin 1a actin-binding domain
To be Published
3PT6
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BU of 3pt6 by Molmil
Crystal structure of mouse DNMT1(650-1602) in complex with DNA
Descriptor: DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ...
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
4DOW
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BU of 4dow by Molmil
Structure of mouse ORC1 BAH domain bound to H4K20me2
Descriptor: Histone H4, Origin recognition complex subunit 1
Authors:Song, J, Patel, D.J.
Deposit date:2012-02-10
Release date:2012-03-07
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.
Nature, 484, 2012
2JWN
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BU of 2jwn by Molmil
Solution NMR structure of the protease-resistent domain of Xenopus laevis ePABP2
Descriptor: Embryonic polyadenylate-binding protein 2-B
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-10-16
Release date:2007-10-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for RNA recognition by a type II poly(A)-binding protein.
Proc.Natl.Acad.Sci.USA, 105, 2008
2GW6
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BU of 2gw6 by Molmil
NMR structure of the human tRNA endonuclease SEN15 subunit
Descriptor: tRNA-splicing endonuclease subunit Sen15
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-05-03
Release date:2006-05-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional structure determined for a subunit of human tRNA splicing endonuclease (Sen15) reveals a novel dimeric fold.
J.Mol.Biol., 366, 2007
2JMU
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BU of 2jmu by Molmil
NMR structure of the mouse thiamine triphosphatase
Descriptor: Thiamine-triphosphatase
Authors:Song, J, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-12-05
Release date:2006-12-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural basis for the catalytic mechanism of mammalian 25-kDa thiamine triphosphatase.
J.Biol.Chem., 283, 2008
4ZDS
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BU of 4zds by Molmil
Crystal Structure of core DNA binding domain of Arabidopsis Thaliana Transcription Factor Ethylene-Insensitive 3
Descriptor: Protein ETHYLENE INSENSITIVE 3
Authors:Song, J, Zhu, C, Zhang, X, Wen, X, Liu, L, Peng, J, Guo, H, Yi, C.
Deposit date:2015-04-18
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Biochemical and Structural Insights into the Mechanism of DNA Recognition by Arabidopsis ETHYLENE INSENSITIVE3.
Plos One, 10, 2015
2JU4
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BU of 2ju4 by Molmil
NMR structure of the gamma subunit of cGMP phosphodiesterase
Descriptor: (3'R)-1'-oxyl-2',2',5',5'-tetramethyl-1,3'-bipyrrolidine-2,5-dione, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
Authors:Song, J, Guo, L.W, Ruoho, A.E, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-08-14
Release date:2007-10-16
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:Intrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure.
Proc.Natl.Acad.Sci.USA, 105, 2008
2ETT
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BU of 2ett by Molmil
Solution Structure of Human Sorting Nexin 22 PX Domain
Descriptor: Sorting nexin-22
Authors:Song, J, Zhao, Q, Tyler, R.C, Lee, M.S, Newman, C.L, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-10-27
Release date:2005-11-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of human sorting nexin 22.
Protein Sci., 16, 2007
2G2B
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BU of 2g2b by Molmil
NMR structure of the human allograft inflammatory factor 1
Descriptor: Allograft inflammatory factor 1
Authors:Song, J, Tyler, R.C, Newman, C.L, Vinarov, D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-02-15
Release date:2006-02-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of the human allograft inflammatory factor 1
To be published
4J2J
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BU of 4j2j by Molmil
Crystal structure of AXH domain complex with Capicua
Descriptor: Ataxin-1, Protein capicua homolog
Authors:Song, J.-J, Kim, E.
Deposit date:2013-02-04
Release date:2013-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
2FFT
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BU of 2fft by Molmil
NMR structure of Spinach Thylakoid Soluble Phosphoprotein of 9 kDa in SDS Micelles
Descriptor: thylakoid soluble phosphoprotein
Authors:Song, J, Carlberg, I, Lee, M.S, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-12-20
Release date:2006-01-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Micelle-induced folding of spinach thylakoid soluble phosphoprotein of 9 kDa and its functional implications.
Biochemistry, 45, 2006
4J2L
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BU of 4j2l by Molmil
Crystal Structure of AXH domain complexed with Capicua
Descriptor: Ataxin-1, Protein capicua homolog
Authors:Song, J.-J, Kim, E.
Deposit date:2013-02-04
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
3WVZ
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BU of 3wvz by Molmil
Crystal structure of Hikeshi, a new nuclear transport receptor of Hsp70
Descriptor: Protein Hikeshi
Authors:Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J.
Deposit date:2014-06-12
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
3WW0
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BU of 3ww0 by Molmil
Crystal structure of F97A mutant, a new nuclear transport receptor of Hsp70
Descriptor: Protein Hikeshi
Authors:Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J.
Deposit date:2014-06-12
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
3PTA
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BU of 3pta by Molmil
Crystal structure of human DNMT1(646-1600) in complex with DNA
Descriptor: DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ...
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
3PT9
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BU of 3pt9 by Molmil
Crystal structure of mouse DNMT1(731-1602) in the free state
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
7EKR
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BU of 7ekr by Molmil
The crystal structure of Orange carotenoid binding protein 1 (OCP1)
Descriptor: Orange carotenoid protein, beta,beta-carotene-4,4'-dione
Authors:Song, J.J, Yoon, J.
Deposit date:2021-04-06
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Color-Tuning Mechanism of the Lit Form of Orange Carotenoid Protein.
Mol.Cells, 46, 2023
9BAP
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BU of 9bap by Molmil
CryoEM structure of Apo-DIM2
Descriptor: DNA (cytosine-5-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Song, J, Shao, Z.
Deposit date:2024-04-04
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:CryoEM structure of Apo-DIM2
To Be Published
9BAZ
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BU of 9baz by Molmil
CryoEM structure of DIM2-HP1 complex
Descriptor: DNA (cytosine-5-)-methyltransferase, Heterochromatin protein one, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Song, J, Shao, Z.
Deposit date:2024-04-05
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:CryoEM structure of DIM2-HP1 complex
To Be Published
5EXH
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BU of 5exh by Molmil
Crystal structure of mTET3-CXXC domain in complex with 5-carboxylcytosine DNA at 1.3 Angstroms resolution.
Descriptor: DNA (5'-D(*GP*AP*AP*TP*CP*(1CC)P*GP*GP*AP*TP*TP*C)-3'), Methylcytosine dioxygenase TET3, ZINC ION
Authors:Song, J.
Deposit date:2015-11-23
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tet3 Reads 5-Carboxylcytosine through Its CXXC Domain and Is a Potential Guardian against Neurodegeneration.
Cell Rep, 14, 2016
2M0O
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BU of 2m0o by Molmil
The solution structure of human PHF1 in complex with H3K36me3
Descriptor: H3K36me3 peptide, PHD finger protein 1
Authors:Song, J, Patel, D.J.
Deposit date:2012-10-30
Release date:2013-01-16
Last modified:2013-02-27
Method:SOLUTION NMR
Cite:An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting.
Mol.Cell, 49, 2013
5HDA
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BU of 5hda by Molmil
Crystal Structure of the BS69 coiled coil-MYND domains bound to an EBNA2 PXLXP motif
Descriptor: Epstein-Barr nuclear antigen 2, ZINC ION, Zinc finger MYND domain-containing protein 11
Authors:Song, J, Harter, M.
Deposit date:2016-01-05
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3899 Å)
Cite:BS69/ZMYND11 C-Terminal Domains Bind and Inhibit EBNA2.
Plos Pathog., 12, 2016

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