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PDB: 1971 件

5J0U
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BU of 5j0u by Molmil
Binary complex crystal structure of DNA polymerase Beta with G:G mismatch at the primer terminus
分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-28
公開日2016-10-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J0Q
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BU of 5j0q by Molmil
Binary complex crystal structure of DNA polymerase Beta with A:G mismatch at the primer terminus
分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-28
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J0T
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BU of 5j0t by Molmil
Binary complex crystal structure of DNA polymerase Beta with G:A mismatch at the primer terminus
分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-28
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2I
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BU of 5j2i by Molmil
Ternary complex crystal structure of DNA polymerase Beta with T:C mismatch at the primer terminus
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase beta, Downstream Primer Strand, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-29
公開日2016-10-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2D
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BU of 5j2d by Molmil
Ternary complex crystal structure of DNA polymerase Beta with C:C mismatch at the primer terminus
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-29
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2B
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BU of 5j2b by Molmil
Ternary complex crystal structure of DNA polymerase Beta with A:C mismatch at the primer terminus
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-29
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2H
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BU of 5j2h by Molmil
Ternary complex crystal structure of DNA polymerase Beta with G:T mismatch at the primer terminus
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
著者Batra, V.K, Wilson, S.H.
登録日2016-03-29
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
7W2W
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BU of 7w2w by Molmil
Crystal structure of TxGH116 R786K mutant from Thermoanaerobacterium xylanolyticum with glucose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Huang, M, Pengthaisong, S, Charoenwattanasatien, R, Jitonnom, J, Ketudat Cairns, J.R.
登録日2021-11-24
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Systematic Functional and Computational Analysis of Glucose-Binding Residues in Glycoside Hydrolase Family GH116.
Catalysts, 12, 2022
3I7Z
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BU of 3i7z by Molmil
Protein Tyrosine Phosphatase 1B - Transition state analog for the first catalytic step
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EGFR receptor fragment, GLYCEROL, ...
著者Brandao, T.A.S, Johnson, S.J, Hengge, A.C.
登録日2009-07-09
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Insights into the reaction of protein-tyrosine phosphatase 1B: crystal structures for transition state analogs of both catalytic steps.
J.Biol.Chem., 285, 2010
4BFG
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BU of 4bfg by Molmil
Structure of the extracellular portion of mouse CD200R
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, AZIDE ION, ...
著者Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N.
登録日2013-03-18
公開日2013-05-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structures of Cd200/Cd200 Receptor Family and Implications for Topology, Regulation, and Evolution
Structure, 21, 2013
4BFI
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BU of 4bfi by Molmil
Structure of the complex of the extracellular portions of mouse CD200R and mouse CD200
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CELL SURFACE GLYCOPROTEIN CD200 RECEPTOR 1, ...
著者Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N.
登録日2013-03-19
公開日2013-05-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structures of Cd200/Cd200 Receptor Family and Implications for Topology, Regulation, and Evolution
Structure, 21, 2013
5VH9
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BU of 5vh9 by Molmil
Cryo-EM structure of yeast cytoplasmic dynein-1 with Lis1 and ATP
分子名称: Dynein heavy chain, cytoplasmic, Nuclear distribution protein PAC1
著者Cianfrocco, M.A, DeSantis, M.E, Htet, Z.M, Tran, P.T, Reck-Peterson, S.L, Leschziner, A.E.
登録日2017-04-12
公開日2017-09-06
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Lis1 Has Two Opposing Modes of Regulating Cytoplasmic Dynein.
Cell, 170, 2017
5VLJ
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BU of 5vlj by Molmil
Cryo-EM structure of yeast cytoplasmic dynein with Walker B mutation at AAA3 in presence of ATP-VO4
分子名称: Dynein heavy chain, cytoplasmic, Nuclear distribution protein PAC1
著者Cianfrocco, M.A, DeSantis, M.E, Htet, Z.M, Tran, P.T, Reck-Peterson, S.L, Leschziner, A.E.
登録日2017-04-25
公開日2017-09-06
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Lis1 Has Two Opposing Modes of Regulating Cytoplasmic Dynein.
Cell, 170, 2017
3I80
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BU of 3i80 by Molmil
Protein Tyrosine Phosphatase 1B - Transition state analog for the second catalytic step
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1, ...
著者Brandao, T.A.S, Johnson, S.J, Hengge, A.C.
登録日2009-07-09
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Insights into the reaction of protein-tyrosine phosphatase 1B: crystal structures for transition state analogs of both catalytic steps.
J.Biol.Chem., 285, 2010
4KLI
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BU of 4kli by Molmil
DNA polymerase beta matched product complex with Mg2+, 90 s
分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
4CMM
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BU of 4cmm by Molmil
Structure of human CD47 in complex with human Signal Regulatory Protein (SIRP) alpha v1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEUKOCYTE SURFACE ANTIGEN CD47, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE SUBSTRATE 1
著者Hatherley, D, Lea, S.M, Johnson, S, Barclay, A.N.
登録日2014-01-16
公開日2014-02-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Polymorphisms in the Human Inhibitory Signal-Regulatory Protein Alpha Do not Affect Binding to its Ligand Cd47.
J.Biol.Chem., 289, 2014
7LV9
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BU of 7lv9 by Molmil
Marseillevirus heterotrimeric (hexameric) nucleosome
分子名称: DNA (96-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
著者Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
登録日2021-02-24
公開日2021-05-05
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
7LV8
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BU of 7lv8 by Molmil
Structure of the Marseillevirus nucleosome
分子名称: DNA (123-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
著者Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
登録日2021-02-24
公開日2021-05-05
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
4BF3
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BU of 4bf3 by Molmil
ErpC, a member of the complement regulator acquiring family of surface proteins from Borrelia burgdorfei, possesses an architecture previously unseen in this protein family.
分子名称: 1,2-ETHANEDIOL, ERPC
著者Caesar, J.J.E, Johnson, S, Kraiczy, P, Lea, S.M.
登録日2013-03-14
公開日2013-06-05
最終更新日2013-10-09
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Erpc, a Member of the Complement Regulator-Acquiring Family of Surface Proteins from Borrelia Burgdorferi, Possesses an Architecture Previously Unseen in This Protein Family.
Acta Crystallogr.,Sect.F, 69, 2013
4KLT
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BU of 4klt by Molmil
DNA polymerase beta mismatched product complex with Mn2+, 30 min
分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*A)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.979 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
4KLJ
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BU of 4klj by Molmil
DNA polymerase beta matched product complex with Mg2+, 5 min
分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
4KLO
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BU of 4klo by Molmil
DNA polymerase beta matched nick complex with Mg2+ and PPi, 30 min
分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
4KLS
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BU of 4kls by Molmil
DNA polymerase beta mismatched reactant complex with Mn2+, 10 min
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*A)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.978 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
4KLM
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BU of 4klm by Molmil
DNA polymerase beta matched product complex with Mg2+, 11 h
分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H.
登録日2013-05-07
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.747 Å)
主引用文献Observing a DNA polymerase choose right from wrong.
Cell(Cambridge,Mass.), 154, 2013
8DYV
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BU of 8dyv by Molmil
Structure of human cytoplasmic dynein-1 bound to one Lis1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
著者Reimer, J.M, DeSantis, M, Reck-Peterson, S.L, Leschziner, A.E.
登録日2022-08-05
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Structures of human dynein in complex with the lissencephaly 1 protein, LIS1.
Elife, 12, 2023

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