Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1919 results

8DS8
DownloadVisualize
BU of 8ds8 by Molmil
Crystal structure of human TNRC18 BAH domain in complex with H3K9me3 peptide
Descriptor: Histone H3.1, Trinucleotide repeat-containing gene 18 protein
Authors:Song, J.K, Lu, J.W.
Deposit date:2022-07-21
Release date:2023-08-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons.
Nature, 623, 2023
3C99
DownloadVisualize
BU of 3c99 by Molmil
Structural Basis of Histone H4 Recognition by p55
Descriptor: CADMIUM ION, Chromatin assembly factor 1 p55 subunit
Authors:Song, J.J, Garlick, J.D, Kingston, R.E.
Deposit date:2008-02-15
Release date:2008-05-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
3BRF
DownloadVisualize
BU of 3brf by Molmil
CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
Descriptor: DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3'), DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3'), Lin-12 and glp-1 phenotype protein 1, ...
Authors:Wilson, J.J, Kovall, R.A.
Deposit date:2007-12-21
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:RAM-induced Allostery Facilitates Assembly of a Notch Pathway Active Transcription Complex.
J.Biol.Chem., 283, 2008
3BRD
DownloadVisualize
BU of 3brd by Molmil
CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3'), DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3'), ...
Authors:Wilson, J.J, Kovall, R.A.
Deposit date:2007-12-21
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:RAM-induced Allostery Facilitates Assembly of a Notch Pathway Active Transcription Complex.
J.Biol.Chem., 283, 2008
3C9C
DownloadVisualize
BU of 3c9c by Molmil
Structural Basis of Histone H4 Recognition by p55
Descriptor: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ...
Authors:Song, J.J, Garlick, J.D, Kingston, R.E.
Deposit date:2008-02-15
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
6UVJ
DownloadVisualize
BU of 6uvj by Molmil
Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
Authors:Johnson, J.A, Pomerantz, W.C.K.
Deposit date:2019-11-02
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
8D3C
DownloadVisualize
BU of 8d3c by Molmil
VWF tubule derived from monomeric D1-A1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
Authors:Anderson, J.R, Li, J, Springer, T.A, Brown, A.
Deposit date:2022-06-01
Release date:2022-07-06
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
8D3D
DownloadVisualize
BU of 8d3d by Molmil
VWF tubule derived from dimeric D1-A1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
Authors:Anderson, J.R, Li, J, Springer, T.A, Brown, A.
Deposit date:2022-06-01
Release date:2022-07-06
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
6UWX
DownloadVisualize
BU of 6uwx by Molmil
Cocrystal of BRD4(D1) with a ethyl carbamate thiazepane inhibitor
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ethyl (7S)-7-(thiophen-2-yl)-1,4-thiazepane-4-carboxylate
Authors:Johnson, J.A, Pomerantz, W.C.K.
Deposit date:2019-11-05
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.307 Å)
Cite:Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
6UVM
DownloadVisualize
BU of 6uvm by Molmil
Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
Descriptor: 1,2-ETHANEDIOL, 1-[(7S)-7-(thiophen-2-yl)-6,7-dihydro-1,4-thiazepin-4(5H)-yl]ethan-1-one, Bromodomain-containing protein 4
Authors:Johnson, J.A, Pomerantz, W.C.K.
Deposit date:2019-11-03
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
2W0D
DownloadVisualize
BU of 2w0d by Molmil
Does a Fast Nuclear Magnetic Resonance Spectroscopy- and X-Ray Crystallography Hybrid Approach Provide Reliable Structural Information of Ligand-Protein Complexes? A Case Study of Metalloproteinases.
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Isaksson, J, Nystrom, S, Derbyshire, D.J, Wallberg, H, Agback, T, Kovacs, H, Bertini, I, Felli, I.C.
Deposit date:2008-08-13
Release date:2009-03-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Does a Fast Nuclear Magnetic Resonance Spectroscopy- and X-Ray Crystallography Hybrid Approach Provide Reliable Structural Information of Ligand-Protein Complexes? a Case Study of Metalloproteinases.
J.Med.Chem., 52, 2009
8GES
DownloadVisualize
BU of 8ges by Molmil
R. hominis 2 beta-glucuronidase bound to UNC10201652-glucuronide
Descriptor: 8-(4-beta-D-glucopyranuronosylpiperazin-1-yl)-5-(morpholin-4-yl)-1,2,3,4-tetrahydro[1,2,3]triazino[4',5':4,5]thieno[2,3 -c]isoquinoline, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Simpson, J.B, Redinbo, M.R.
Deposit date:2023-03-07
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Diverse Human Therapeutics Impact Hormone and Neurotransmitter Homeostasis by Inhibiting Gut Microbial Enzymes
To Be Published
3BZM
DownloadVisualize
BU of 3bzm by Molmil
Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF
Descriptor: CITRIC ACID, Menaquinone-specific isochorismate synthase
Authors:Parsons, J.F, Shi, K.M, Ladner, J.E.
Deposit date:2008-01-18
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of isochorismate synthase in complex with magnesium.
Acta Crystallogr.,Sect.D, 64, 2008
1H3I
DownloadVisualize
BU of 1h3i by Molmil
Crystal structure of the Histone Methyltransferase SET7/9
Descriptor: HISTONE H3 LYSINE 4 SPECIFIC METHYLTRANSFERASE, MAGNESIUM ION
Authors:Wilson, J.R, Jing, C, Walker, P.A, Martin, S.R, Howell, S.A, Blackburn, G.M, Gamblin, S.J, Xiao, B.
Deposit date:2002-09-04
Release date:2002-11-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure and Functional Analysis of the Histone Methyltransferase Set7/9
Cell(Cambridge,Mass.), 111, 2002
4TT3
DownloadVisualize
BU of 4tt3 by Molmil
The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2014-06-19
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
1NQJ
DownloadVisualize
BU of 1nqj by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.0 ANGSTROM RESOLUTION IN ABSENCE OF CALCIUM
Descriptor: CHLORIDE ION, LITHIUM ION, class 1 collagenase
Authors:Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
Deposit date:2003-01-21
Release date:2003-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1 Å)
Cite:A bacterial collagen-binding domain with novel calcium-binding motif controls domain orientation
Embo J., 22, 2003
1NQD
DownloadVisualize
BU of 1nqd by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.65 ANGSTROM RESOLUTION IN PRESENCE OF CALCIUM
Descriptor: CALCIUM ION, class 1 collagenase
Authors:Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
Deposit date:2003-01-21
Release date:2003-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Bacterial Collagen-Binding Domain with Novel Calcium-Binding Motif Controls Domain Orientation
Embo J., 22, 2003
3BZN
DownloadVisualize
BU of 3bzn by Molmil
Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF
Descriptor: MAGNESIUM ION, Menaquinone-specific isochorismate synthase, SULFATE ION
Authors:Parsons, J.F, Shi, K.M, Ladner, J.E.
Deposit date:2008-01-18
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of isochorismate synthase in complex with magnesium.
Acta Crystallogr.,Sect.D, 64, 2008
3MP9
DownloadVisualize
BU of 3mp9 by Molmil
Structure of Streptococcal protein G B1 domain at pH 3.0
Descriptor: FORMIC ACID, Immunoglobulin G-binding protein G
Authors:Tomlinson, J.H, Green, V.L, Baker, P.J, Williamson, M.P.
Deposit date:2010-04-26
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural origins of pH-dependent chemical shifts in the B1 domain of protein G.
Proteins, 78, 2010
4Q57
DownloadVisualize
BU of 4q57 by Molmil
Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
Deposit date:2014-04-16
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
To be Published
4R79
DownloadVisualize
BU of 4r79 by Molmil
Mos1 transposase paired-end complex with left transposon end
Descriptor: MANGANESE (II) ION, Mariner Mos1 transposase, SULFATE ION, ...
Authors:Richardson, J.M.
Deposit date:2014-08-27
Release date:2015-04-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for the Inverted Repeat Preferences of mariner Transposases.
J.Biol.Chem., 290, 2015
4TSF
DownloadVisualize
BU of 4tsf by Molmil
The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2014-06-18
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
5KUF
DownloadVisualize
BU of 5kuf by Molmil
GluK2EM with 2S,4R-4-methylglutamate
Descriptor: 2S,4R-4-METHYLGLUTAMATE, Glutamate receptor ionotropic, kainate 2
Authors:Meyerson, J.R, Chittori, S, Merk, A, Rao, P, Han, T.H, Serpe, M, Mayer, M.L, Subramaniam, S.
Deposit date:2016-07-13
Release date:2016-09-07
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of kainate subtype glutamate receptor desensitization.
Nature, 537, 2016
4TZ9
DownloadVisualize
BU of 4tz9 by Molmil
Structure of Metallo-beta-lactamase
Descriptor: CADMIUM ION, COBALT (II) ION, Class B metallo-beta-lactamase, ...
Authors:Ferguson, J.A, Brem, J, Makena, A, McDonough, A.M, Schofield, C.J.
Deposit date:2014-07-09
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1269 Å)
Cite:Structure of Metallo-beta-lactamase
To Be Published
4TZE
DownloadVisualize
BU of 4tze by Molmil
Structure of metallo-beta-lactamase
Descriptor: Class B carbapenemase NDM-5, ZINC ION
Authors:Ferguson, J.A, Makena, A, Brem, J, McDonough, M.A, Schofield, C.J.
Deposit date:2014-07-10
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.574 Å)
Cite:stucuture of metallo-beta-lactamase
To Be Published

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon