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PDB: 23 件

5IQQ
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Crystal structure of the human RBM7 RRM domain
分子名称: RNA-binding protein 7
著者Sofos, N, Winkler, M.B.L, Brodersen, D.E.
登録日2016-03-11
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献RRM domain of human RBM7: purification, crystallization and structure determination.
Acta Crystallogr.,Sect.F, 72, 2016
6S8B
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BU of 6s8b by Molmil
Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 1
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-07-09
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (2.41 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6S91
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Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 2
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-07-11
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6S8E
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Cryo-EM structure of the type III-B Cmr-beta complex bound to non-cognate target RNA
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-07-09
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6SH8
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Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 2, in the presence of ssDNA
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-08-06
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6S6B
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Type III-B Cmr-beta Cryo-EM structure of the Apo state
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-07-02
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6SIC
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BU of 6sic by Molmil
Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA
分子名称: CRISPR-associated RAMP protein, Cmr1 family, Cmr4 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-08-09
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6SHB
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Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 1, in the presence of ssDNA
分子名称: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
著者Sofos, N, Montoya, G, Stella, S.
登録日2019-08-06
公開日2020-07-08
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
7ODF
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Structure of the mini-RNA-guided endonuclease CRISPR-Cas_phi3
分子名称: Cas_phi3, DNA (5'-D(P*GP*G)-3'), DNA (5'-D(P*GP*TP*AP*AP*TP*TP*CP*AP*G)-3'), ...
著者Carabias del Rey, A, Fugilsang, A, Temperini, P, Pape, T, Sofos, N, Stella, S, Erledsson, S, Montoya, G.
登録日2021-04-29
公開日2021-07-21
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure of the mini-RNA-guided endonuclease CRISPR-Cas12j3.
Nat Commun, 12, 2021
8AXA
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Cryo-EM structure of shCas12k-sgRNA-dsDNA ternary complex (type V-K CRISPR-associated transposon)
分子名称: Cas12k, DNA non-target strand, DNA target strand, ...
著者Tenjo-Castano, F, Sofos, N, Stella, S, Fuglsang, A, Pape, T, Mesa, P, Stutzke, L.S, Temperini, P, Montoya, G.
登録日2022-08-31
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Conformational Landscape of the Type V-K CRISPR-associated Transposon Integration Assembly
To Be Published
8AXB
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Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
分子名称: Cas12k, sgRNA
著者Tenjo-Castano, F, Sofos, N, Stella, S, Molina, R, Pape, T, Lopez-Mendez, B, Stutzke, L.S, Temperini, P, Montoya, G.
登録日2022-08-31
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Structural prediction of the Cas12k interaction with the transposon pre-integration complex
To Be Published
4FXE
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BU of 4fxe by Molmil
Crystal structure of the intact E. coli RelBE toxin-antitoxin complex
分子名称: Antitoxin RelB, SULFATE ION, mRNA interferase RelE
著者Brodersen, D.E, Boggild, A, Sofos, N.
登録日2012-07-03
公開日2012-08-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7503 Å)
主引用文献The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
4FXI
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Crystal structure of the isolated E. coli RelE toxin, P21 form
分子名称: SULFATE ION, mRNA interferase RelE
著者Brodersen, D.E, Boggild, A, Sofos, N.
登録日2012-07-03
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8003 Å)
主引用文献The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
4FXH
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BU of 4fxh by Molmil
Crystal structure of the isolated E. coli RelE toxin, P212121 form
分子名称: SULFATE ION, mRNA interferase RelE
著者Brodersen, D.E, Boggild, A, Sofos, N.
登録日2012-07-03
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
7Z18
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BU of 7z18 by Molmil
E. coli C-P lyase bound to a PhnK ABC dimer and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, ...
著者Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
登録日2022-02-24
公開日2022-05-25
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
7Z19
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BU of 7z19 by Molmil
E. coli C-P lyase bound to a single PhnK ABC domain
分子名称: Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH, ...
著者Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
登録日2022-02-24
公開日2022-05-25
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
7Z17
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BU of 7z17 by Molmil
E. coli C-P lyase bound to a PhnK ABC dimer in an open conformation
分子名称: Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH, ...
著者Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
登録日2022-02-24
公開日2022-05-25
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
7Z15
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BU of 7z15 by Molmil
E. coli C-P lyase bound to a PhnK/PhnL dual ABC dimer and ADP + Pi
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, ...
著者Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
登録日2022-02-24
公開日2022-06-22
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (1.93 Å)
主引用文献Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
8AA5
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BU of 8aa5 by Molmil
Cryo-EM structure of the strand transfer complex of the TnsB transposase (type V-K CRISPR-associated transposon)
分子名称: LE_PolyA, LE_Target, RE_PolyA, ...
著者Tenjo-Castano, F, Sofos, N, Lopez-Mendez, B, Stutzke, L.S, Fuglsang, A, Stella, S, Montoya, G.
登録日2022-06-30
公開日2022-10-19
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Structure of the TnsB transposase-DNA complex of type V-K CRISPR-associated transposon.
Nat Commun, 13, 2022
6QZT
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BU of 6qzt by Molmil
Crystal structure of Csx1 from Sulfolobus islandicus orthorhombic form
分子名称: CRISPR-associated (Cas) DxTHG family
著者Molina, R, Montoya, G, Sofos, N, Stella, S.
登録日2019-03-12
公開日2019-10-02
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019
6R7B
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Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1
分子名称: CRISPR-associated (Cas) DxTHG family, RNA (5'-R(P*AP*AP*AP*A)-3')
著者Molina, R, Montoya, G, Sofos, N, Stella, S.
登録日2019-03-28
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019
6QZQ
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Crystal structure of Csx1 from Sulfolobus islandicus monoclinic form
分子名称: CRISPR-associated (Cas) DxTHG family
著者Molina, R, Montoya, G, Sofos, N, Stella, S.
登録日2019-03-12
公開日2020-01-22
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019
6R9R
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BU of 6r9r by Molmil
Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2
分子名称: CRISPR-associated (Cas) DxTHG family, circular RNA (5'-R(P*AP*AP*AP*A)-3')
著者Molina, R, Montoya, G, Sofos, N, Stella, S.
登録日2019-04-03
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019

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