Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89 results

3L6G
DownloadVisualize
BU of 3l6g by Molmil
Crystal structure of lactococcal OpuAC in its open conformation
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Betaine ABC transporter permease and substrate binding protein
Authors:Berntsson, R.P.A, Wolters, J.C, Gul, N, Karasawa, A, Thunnissen, A.M.W.H, Slotboom, D.J, Poolman, B.
Deposit date:2009-12-23
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand binding and crystal structures of the substrate-binding domain of the ABC transporter OpuA.
Plos One, 5, 2010
3L6H
DownloadVisualize
BU of 3l6h by Molmil
Crystal structure of lactococcal OpuAC in its closed-liganded conformation complexed with glycine betaine
Descriptor: Betaine ABC transporter permease and substrate binding protein, CHLORIDE ION, TRIMETHYL GLYCINE
Authors:Berntsson, R.P.A, Wolters, J.C, Gul, N, Karasawa, A, Thunnissen, A.M.W.H, Slotboom, D.J, Poolman, B.
Deposit date:2009-12-23
Release date:2010-05-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand binding and crystal structures of the substrate-binding domain of the ABC transporter OpuA.
Plos One, 5, 2010
4FAJ
DownloadVisualize
BU of 4faj by Molmil
Structure and mode of peptide binding of pheromone receptor PrgZ
Descriptor: GLYCEROL, PrgZ, Sex pheromone cCF10, ...
Authors:Berntsson, R.P.-A, Schuurman-Wolters, G.K, Dunny, K, Slotboom, D.J, Poolman, B.
Deposit date:2012-05-22
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Mode of Peptide Binding of Pheromone Receptor PrgZ.
J.Biol.Chem., 287, 2012
5DWY
DownloadVisualize
BU of 5dwy by Molmil
Crystal structure of a substrate-free glutamate transporter homologue GltTk
Descriptor: DI(HYDROXYETHYL)ETHER, Proton/glutamate symporter, SDF family, ...
Authors:Guskov, A, Slotboom, D.J.
Deposit date:2015-09-23
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Coupled binding mechanism of three sodium ions and aspartate in the glutamate transporter homologue GltTk.
Nat Commun, 7, 2016
5E9S
DownloadVisualize
BU of 5e9s by Molmil
Crystal structure of substrate-bound glutamate transporter homologue GltTk
Descriptor: ASPARTIC ACID, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Guskov, A, Slotboom, D.J.
Deposit date:2015-10-15
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Coupled binding mechanism of three sodium ions and aspartate in the glutamate transporter homologue GltTk.
Nat Commun, 7, 2016
5D3M
DownloadVisualize
BU of 5d3m by Molmil
Folate ECF transporter: AMPPNP bound state
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Guskov, A, Swier, L.J.Y.M, Slotboom, D.J.
Deposit date:2015-08-06
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.303 Å)
Cite:Structural insight in the toppling mechanism of an energy-coupling factor transporter.
Nat Commun, 7, 2016
8BMQ
DownloadVisualize
BU of 8bmq by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMS
DownloadVisualize
BU of 8bms by Molmil
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMR
DownloadVisualize
BU of 8bmr by Molmil
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMP
DownloadVisualize
BU of 8bmp by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8PTD
DownloadVisualize
BU of 8ptd by Molmil
The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
Descriptor: COBALAMIN, GLYCEROL, HYDROXIDE ION, ...
Authors:Whittaker, J, Felices Martinez, J.M, Guskov, A, Slotboom, D.J.
Deposit date:2023-07-14
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The surface-exposed lipo-protein of BtuG1 in complex with cyanocobalamin.
To Be Published
8PUJ
DownloadVisualize
BU of 8puj by Molmil
The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
Descriptor: COB(II)INAMIDE, HYDROXIDE ION, SODIUM ION, ...
Authors:Whittaker, J, Martinez-Felices, J.M, Guskov, A, Slotboom, D.J.
Deposit date:2023-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The surface-exposed lipo-protein of BtuG3 in complex with cyanocobinamide.
To Be Published
8PTF
DownloadVisualize
BU of 8ptf by Molmil
The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
Descriptor: COB(II)INAMIDE, SODIUM ION, YncE family protein, ...
Authors:Whittaker, J, Felices Martinez, J.M, Guskov, A, Slotboom, D.J.
Deposit date:2023-07-14
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The surface-exposed lipo-protein of BtuG1 in complex with cyanocobinamide.
To Be Published
3ZKK
DownloadVisualize
BU of 3zkk by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with xylotetraose
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, XOS BINDING PROTEIN, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Ejby, M, Vujicic-Zagar, A, Fredslund, F, Svensson, B, Slotboom, D.J, Abou Hachem, M.
Deposit date:2013-01-23
Release date:2013-10-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
3ZKL
DownloadVisualize
BU of 3zkl by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with xylotriose
Descriptor: PENTAETHYLENE GLYCOL, PUTATIVE SUGAR TRANSPORTER SOLUTE-BINDING PROTEIN, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Ejby, M, Vujicic-Zagar, A, Fredslund, F, Svensson, B, Slotboom, D.J, Abou Hachem, M.
Deposit date:2013-01-23
Release date:2013-10-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
4C1U
DownloadVisualize
BU of 4c1u by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with arabinoxylobiose
Descriptor: PENTAETHYLENE GLYCOL, SUGAR TRANSPORTER SOLUTE-BINDING PROTEIN, alpha-L-arabinofuranose-(1-3)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Fredslund, F, Ejby, M, Vujicic-Zagar, A, Svensson, B, Slotboom, D.J, Abou Hachem, M.
Deposit date:2013-08-13
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
4C1T
DownloadVisualize
BU of 4c1t by Molmil
Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with arabinoxylotriose
Descriptor: PENTAETHYLENE GLYCOL, SUGAR TRANSPORTER SOLUTE-BINDING PROTEIN, alpha-L-arabinofuranose-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Fredslund, F, Ejby, M, Vujicic-Zagar, A, Svensson, B, Slotboom, D.J, Abou Hachem, M.
Deposit date:2013-08-13
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol.Microbiol., 90, 2013
6R7R
DownloadVisualize
BU of 6r7r by Molmil
Crystal structure of the glutamate transporter homologue GltTk in complex with D-aspartate
Descriptor: D-ASPARTIC ACID, DECYL-BETA-D-MALTOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Arkhipova, V, Guskov, A, Slotboom, D.J.
Deposit date:2019-03-29
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Binding and transport of D-aspartate by the glutamate transporter homolog Glt Tk .
Elife, 8, 2019
6XWN
DownloadVisualize
BU of 6xwn by Molmil
Structure of glutamate transporter homologue GltTk in the presence of TBOA inhibitor
Descriptor: (3S)-3-(BENZYLOXY)-L-ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWQ
DownloadVisualize
BU of 6xwq by Molmil
Structure of glutamate transporter homologue GltTk in the saturated conditions
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6XWR
DownloadVisualize
BU of 6xwr by Molmil
Structure of glutamate transporter homologue GltTk in sodium only condition
Descriptor: Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020
6RVX
DownloadVisualize
BU of 6rvx by Molmil
Inward-open structure of the ASCT2 (SLC1A5) mutant C467R in presence of TBOA
Descriptor: Neutral amino acid transporter B(0)
Authors:Garaeva, A.A, Guskov, A, Slotboom, D.J, Paulino, C.
Deposit date:2019-06-03
Release date:2019-08-07
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:A one-gate elevator mechanism for the human neutral amino acid transporter ASCT2.
Nat Commun, 10, 2019
6RVY
DownloadVisualize
BU of 6rvy by Molmil
Inward-open structure of the ASCT2 (SLC1A5) mutant C467R in absence of substrate
Descriptor: Neutral amino acid transporter B(0)
Authors:Garaeva, A.A, Guskov, A, Slotboom, D.J, Paulino, C.
Deposit date:2019-06-03
Release date:2019-08-07
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:A one-gate elevator mechanism for the human neutral amino acid transporter ASCT2.
Nat Commun, 10, 2019
8C7P
DownloadVisualize
BU of 8c7p by Molmil
Tagless BtuM in complex with cyanocobalamin
Descriptor: COBALAMIN, Cobalamin ABC transporter
Authors:Martinez-Felices, J.M, Slotboom, D.J.
Deposit date:2023-01-16
Release date:2024-01-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cobalamin decyanation by the membrane transporter BtuM.
Structure, 32, 2024
6XWO
DownloadVisualize
BU of 6xwo by Molmil
Structure of glutamate transporter homologue GltTk in the unsaturated conditions - inward-inward-outward configuration
Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family
Authors:Arkhipova, V, Slotboom, D.J, Guskov, A.
Deposit date:2020-01-24
Release date:2020-03-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.
Nat Commun, 11, 2020

225681

數據於2024-10-02公開中

PDB statisticsPDBj update infoContact PDBjnumon