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PDB: 38 件
3EDU
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Crystal structure of the ankyrin-binding domain of human erythroid spectrin
分子名称: Spectrin beta chain, erythrocyte
著者Simonovic, M, Stabach, P, Simonovic, I, Steitz, T.A, Morrow, J.S.
登録日2008-09-03
公開日2009-02-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the ankyrin-binding site of {beta}-spectrin reveals how tandem spectrin-repeats generate unique ligand-binding properties
Blood, 113, 2009
1C8O
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BU of 1c8o by Molmil
2.9 A STRUCTURE OF CLEAVED VIRAL SERPIN CRMA
分子名称: ICE INHIBITOR
著者Simonovic, M, Gettins, P.G.W, Volz, K.
登録日2000-06-01
公開日2000-09-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of viral serpin crmA provides insights into its mechanism of cysteine proteinase inhibition.
Protein Sci., 9, 2000
2FOT
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BU of 2fot by Molmil
Crystal structure of the complex between calmodulin and alphaII-spectrin
分子名称: CALCIUM ION, Calmodulin, alpha-II spectrin Spectrin
著者Simonovic, M, Zhang, Z, Cianci, C.D, Steitz, T.A, Morrow, J.S.
登録日2006-01-13
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of the calmodulin alphaII-spectrin complex provides insight into the regulation of cell plasticity.
J.Biol.Chem., 281, 2006
1JBE
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BU of 1jbe by Molmil
1.08 A Structure of apo-Chey reveals meta-active conformation
分子名称: Chemotaxis protein CheY, GLYCEROL, SULFATE ION
著者Simonovic, M, Volz, K.
登録日2001-06-04
公開日2001-08-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献A distinct meta-active conformation in the 1.1-A resolution structure of wild-type ApoCheY.
J.Biol.Chem., 276, 2001
3CME
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BU of 3cme by Molmil
The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
分子名称: 50S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
著者Simonovic, M, Steitz, T.A.
登録日2008-03-21
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA.
Rna, 14, 2008
3CMA
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BU of 3cma by Molmil
The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui
分子名称: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
著者Simonovic, M, Steitz, T.A.
登録日2008-03-21
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA.
Rna, 14, 2008
1M93
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1.65 A Structure of Cleaved Viral Serpin CRMA
分子名称: PHOSPHATE ION, Serine proteinase inhibitor 2
著者Simonovic, M, Gettins, P.G.W, Volz, K.
登録日2002-07-26
公開日2003-08-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of viral serpin crmA provides insights into its mechanism of cysteine proteinase inhibition
Protein Sci., 9, 2000
1IMV
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2.85 A crystal structure of PEDF
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PIGMENT EPITHELIUM-DERIVED FACTOR
著者Simonovic, M, Gettins, P.G.W, Volz, K.
登録日2001-05-11
公開日2001-09-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of human PEDF, a potent anti-angiogenic and neurite growth-promoting factor.
Proc.Natl.Acad.Sci.USA, 98, 2001
1J8E
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Crystal structure of ligand-binding repeat CR7 from LRP
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1
著者Simonovic, M, Dolmer, K, Huang, W, Strickland, D.K, Volz, K, Gettins, P.G.W.
登録日2001-05-21
公開日2001-12-19
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Calcium coordination and pH dependence of the calcium affinity of ligand-binding repeat CR7 from the LRP. Comparison with related domains from the LRP and the LDL receptor.
Biochemistry, 40, 2001
4EO4
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Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase (MST1) in complex with seryl sulfamoyl adenylate
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, Threonine--tRNA ligase, mitochondrial, ...
著者Peterson, K.M, Ling, J, Simonovic, I, Soll, D, Simonovic, M.
登録日2012-04-13
公開日2012-07-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献The mechanism of pre-transfer editing in yeast mitochondrial threonyl-tRNA synthetase.
J.Biol.Chem., 287, 2012
7ZJX
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Rabbit 80S ribosome programmed with SECIS and SBP2
分子名称: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ...
著者Hilal, T, Simonovic, M, Spahn, C.M.T.
登録日2022-04-12
公開日2022-09-07
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.
Science, 376, 2022
3LXO
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The crystal structure of ribonuclease A in complex with thymidine-3'-monophosphate
分子名称: Ribonuclease pancreatic, THYMIDINE-3'-PHOSPHATE
著者Doucet, N, Jayasundera, T.B, Simonovic, M, Loria, J.P.
登録日2010-02-25
公開日2010-04-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.549 Å)
主引用文献The crystal structure of ribonuclease A in complex with thymidine-3'-monophosphate provides further insight into ligand binding.
Proteins, 78, 2010
8G9Z
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High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
著者Puppala, A, Simonovic, M, Castillo Suchkou, J.
登録日2023-02-22
公開日2023-04-05
最終更新日2023-05-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 51, 2023
3UGQ
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Crystal structure of the apo form of the yeast mitochondrial threonyl-tRNA synthetase determined at 2.1 Angstrom resolution
分子名称: POTASSIUM ION, SULFATE ION, Threonyl-tRNA synthetase, ...
著者Peterson, K.M, Ling, J, Simonovic, I, Cho, C, Soll, D, Simonovic, M.
登録日2011-11-02
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UGT
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Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase - orthorhombic crystal form
分子名称: Threonyl-tRNA synthetase, mitochondrial, ZINC ION
著者Peterson, K.M, Ling, J, Simonovic, I, Cho, C, Soll, D, Simonovic, M.
登録日2011-11-02
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UH0
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Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase (MST1) in complex with threonyl sulfamoyl adenylate
分子名称: 5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Threonyl-tRNA synthetase, ...
著者Peterson, K.M, Ling, J, Simonovic, I, Cho, C, Soll, D, Simonovic, M.
登録日2011-11-03
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment.
Proc.Natl.Acad.Sci.USA, 109, 2012
7ZJW
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Rabbit 80S ribosome as it decodes the Sec-UGA codon
分子名称: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ...
著者Hilal, T, Simonovic, M, Spahn, C.M.T.
登録日2022-04-12
公開日2022-10-19
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.
Science, 376, 2022
3HL2
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The crystal structure of the human SepSecS-tRNASec complex
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Monothiophosphate, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
著者Palioura, S, Steitz, T.A, Soll, D, Simonovic, M.
登録日2009-05-26
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
Science, 325, 2009
5IZL
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The crystal structure of human eEFSec in complex with GDPCP
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Selenocysteine-specific elongation factor
著者Dobosz-Bartoszek, M, Simonovic, M.
登録日2016-03-25
公開日2016-10-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation.
Nat Commun, 7, 2016
5IZK
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The crystal structure of human eEFSec in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Selenocysteine-specific elongation factor
著者Dobosz-Bartoszek, M, Simonovic, M.
登録日2016-03-25
公開日2016-10-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation.
Nat Commun, 7, 2016
5IZM
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The crystal structure of human eEFSec in complex with GDPNP
分子名称: MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Selenocysteine-specific elongation factor
著者Dobosz-Bartoszek, M, Otwinowski, Z, Simonovic, M.
登録日2016-03-25
公開日2016-10-12
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation.
Nat Commun, 7, 2016
7L1T
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Crystal structure of human holo SepSecS
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, O-phosphoseryl-tRNA(Sec) selenium transferase, PHOSPHATE ION
著者Puppala, A, Castillo Suchkou, J, Simonovic, M.
登録日2020-12-15
公開日2022-02-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 2023
7MDL
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High-resolution crystal structure of human SepSecS-tRNASec complex
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, CITRATE ANION, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
著者Puppala, A, French, R.L, Simonovic, M.
登録日2021-04-05
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 2023
1OO8
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CRYSTAL STRUCTURE OF A1PI-PITTSBURGH IN THE NATIVE CONFORMATION
分子名称: Alpha-1-antitrypsin precursor
著者Dementiev, A, Simonovic, M, Volz, K, Gettins, P.G.
登録日2003-03-03
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Canonical inhibitor-like interactions explain reactivity of alpha1-proteinase inhibitor Pittsburgh and antithrombin with proteinases
J.Biol.Chem., 278, 2003
1OPH
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NON-COVALENT COMPLEX BETWEEN ALPHA-1-PI-PITTSBURGH AND S195A TRYPSIN
分子名称: Alpha-1-antitrypsin precursor, Trypsinogen, cationic precursor
著者Dementiev, A, Simonovic, M, Volz, K, Gettins, P.G.
登録日2003-03-05
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Canonical inhibitor-like interactions explain reactivity of alpha1-proteinase inhibitor Pittsburgh and antithrombin with proteinases
J.Biol.Chem., 278, 2003

 

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