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PDB: 192 results

2B5H
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1.5 A Resolution Crystal Structure of Recombinant R. Norvegicus Cysteine Dioxygenase
Descriptor: Cysteine dioxygenase type I, FE (III) ION
Authors:Simmons, C.R, Liu, Q, Huang, Q, Hao, Q, Begley, T.P, Karplus, P.A, Stipanuk, M.H.
Deposit date:2005-09-28
Release date:2006-04-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Mammalian Cysteine Dioxygenase: A NOVEL MONONUCLEAR IRON CENTER FOR CYSTEINE THIOL OXIDATION.
J.Biol.Chem., 281, 2006
5C39
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Crystal structure of a designed Mn binding peptide
Descriptor: MANGANESE (II) ION, P0 Manganese cluster peptide
Authors:Simmons, C.R, Olson, T.L, Allen, J.P.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Design of dinuclear manganese cofactors for bacterial reaction centers.
Biochim.Biophys.Acta, 1857, 2016
6DKL
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BU of 6dkl by Molmil
Crystal Structure of a Rationally Designed Six-Fold Symmetric DNA Scaffold
Descriptor: DNA (5'-D(P*CP*AP*CP*AP*CP*CP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*GP*AP*TP*GP*CP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*AP*CP*GP*GP*AP*TP*CP*CP*AP*G)-3'), ...
Authors:Simmons, C.R, Zhang, F, Yan, H.
Deposit date:2018-05-29
Release date:2018-08-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.034 Å)
Cite:Self-Assembly of a 3D DNA Crystal Structure with Rationally Designed Six-Fold Symmetry.
Angew. Chem. Int. Ed. Engl., 57, 2018
2GH2
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BU of 2gh2 by Molmil
1.5 A Resolution R. Norvegicus Cysteine Dioxygenase Structure Crystallized in the Presence of Cysteine
Descriptor: Cysteine dioxygenase type I, FE (III) ION, SULFATE ION
Authors:Simmons, C.R, Karplus, P.A, Stipanuk, M.H.
Deposit date:2006-03-24
Release date:2006-04-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Mammalian Cysteine Dioxygenase: A NOVEL MONONUCLEAR IRON CENTER FOR CYSTEINE THIOL OXIDATION.
J.Biol.Chem., 281, 2006
3DGO
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BU of 3dgo by Molmil
A non-biological ATP binding protein with a Tyr-Phe mutation in the ligand binding domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP Binding Protein-DX, CHLORIDE ION, ...
Authors:Simmons, C.R, Allen, J.P, Chaput, J.C.
Deposit date:2008-06-13
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A synthetic protein selected for ligand binding affinity mediates ATP hydrolysis.
Acs Chem.Biol., 4, 2009
3ELN
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BU of 3eln by Molmil
A Putative Fe2+-bound Persulfenate Intermediate in Cysteine Dioxygenase
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, S-HYDROPEROXYCYSTEINE
Authors:Simmons, C.R, Stipanuk, M.H, Karplus, P.A.
Deposit date:2008-09-22
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:A putative Fe2+-bound persulfenate intermediate in cysteine dioxygenase.
Biochemistry, 47, 2008
3DGN
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BU of 3dgn by Molmil
A non-biological ATP binding protein crystallized in the presence of 100 mM ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP Binding Protein-DX, DI(HYDROXYETHYL)ETHER, ...
Authors:Simmons, C.R, Allen, J.P, Chaput, J.C.
Deposit date:2008-06-13
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A synthetic protein selected for ligand binding affinity mediates ATP hydrolysis.
Acs Chem.Biol., 4, 2009
3DGL
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1.8 A Crystal Structure of a Non-biological Protein with Bound ATP in a Novel Bent Conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP Binding Protein-DX, DI(HYDROXYETHYL)ETHER, ...
Authors:Simmons, C.R, Allen, J.P, Chaput, J.C.
Deposit date:2008-06-13
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A synthetic protein selected for ligand binding affinity mediates ATP hydrolysis.
Acs Chem.Biol., 4, 2009
3DGM
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BU of 3dgm by Molmil
2.4 A Structure of a Non-biological ATP binding protein with ADP bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP Binding Protein-DX, DI(HYDROXYETHYL)ETHER, ...
Authors:Simmons, C.R, Allen, J.P, Chaput, J.C.
Deposit date:2008-06-13
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Primordial ATP Binding Protein Generated from Random Sequence Origin
To be Published
3LTB
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BU of 3ltb by Molmil
X-ray structure of a non-biological ATP binding protein determined in the presence of 10 mM ATP at 2.6 A after 3 weeks of incubation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
3LT8
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A non-biological ATP binding protein with a single point mutation (D65V), that contributes to optimized folding and ligand binding, crystallized in the presence of 100 mM ATP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-D65V, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
3LTC
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BU of 3ltc by Molmil
X-ray structure of a non-biological ATP binding protein determined in the presence of 10 mM ATP at 2.0 A by multi-wavelength anomalous dispersion
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
3LT9
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BU of 3lt9 by Molmil
A non-biological ATP binding protein with a single point mutation (D65V), that contributes to optimized folding and ligand binding
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-D65V, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
3LTD
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BU of 3ltd by Molmil
X-ray structure of a non-biological ATP binding protein determined at 2.8 A by multi-wavelength anomalous dispersion
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
3LTA
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BU of 3lta by Molmil
Crystal structure of a non-biological ATP binding protein with a TYR-PHE mutation within the ligand binding domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ...
Authors:Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C.
Deposit date:2010-02-15
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Biochemistry, 49, 2010
5KEO
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BU of 5keo by Molmil
Structure Determination of a Self-Assembling DNA Crystal
Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*T)-3'), ...
Authors:Simmons, C.R, Birktoft, J.J, Seeman, N.C, Yan, H.
Deposit date:2016-06-09
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Construction and Structure Determination of a Three-Dimensional DNA Crystal.
J.Am.Chem.Soc., 138, 2016
5KEK
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BU of 5kek by Molmil
Structure Determination of a Self-Assembling DNA Crystal
Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*T)-3'), ...
Authors:Simmons, C.R, Birktoft, J.J, Seeman, N.C, Yan, H.
Deposit date:2016-06-09
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Construction and Structure Determination of a Three-Dimensional DNA Crystal.
J.Am.Chem.Soc., 138, 2016
6UAL
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BU of 6ual by Molmil
A Self-Assembling DNA Crystal Scaffold with Cavities Containing 3 Helical Turns per Edge
Descriptor: DNA (32-MER), DNA (5'-D(*TP*GP*GP*AP*AP*AP*CP*AP*GP*AP*CP*TP*GP*TP*CP*AP*GP*AP*TP*G)-3'), DNA (5'-D(P*AP*GP*CP*AP*TP*GP*A)-3'), ...
Authors:Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H.
Deposit date:2019-09-10
Release date:2020-09-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (4.514 Å)
Cite:Crystal Structure of a Self-Assembling DNA Crystal Scaffold with Rhombohedral Symmetry
To Be Published
6UDN
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BU of 6udn by Molmil
Crystal Structure of a Self-Assembling DNA Scaffold Containing TA Sticky Ends and Rhombohedral Symmetry
Descriptor: ARSENIC, DNA (5'-D(*TP*AP*CP*TP*GP*AP*CP*TP*CP*AP*TP*GP*CP*TP*CP*AP*TP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*AP*TP*CP*AP*GP*AP*TP*G)-3'), ...
Authors:Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H.
Deposit date:2019-09-19
Release date:2020-09-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High-Resolution Structural Detail.
Angew.Chem.Int.Ed.Engl., 59, 2020
6U40
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BU of 6u40 by Molmil
Crystal Structure of a Self-Assembling DNA Crystal Scaffold with Rhombohedral Symmetry
Descriptor: CACODYLATE ION, DNA (5'-D(*CP*AP*CP*TP*GP*AP*CP*TP*CP*AP*TP*GP*CP*TP*CP*AP*TP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*GP*AP*TP*G)-3'), ...
Authors:Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H.
Deposit date:2019-08-22
Release date:2020-08-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High-Resolution Structural Detail.
Angew.Chem.Int.Ed.Engl., 59, 2020
6UEF
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BU of 6uef by Molmil
Crystal Structure of a Self-Assembling DNA Scaffold Containing Sequence Modifications to Attempt to Disrupt Crystal Contacts in a Rhombohedral Lattice.
Descriptor: DNA (5'-D(*CP*AP*AP*TP*GP*AP*CP*TP*CP*AP*TP*GP*CP*TP*CP*AP*TP*CP*GP*GP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*GP*AP*TP*G)-3'), DNA (5'-D(P*AP*GP*CP*AP*TP*GP*A)-3'), ...
Authors:Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High-Resolution Structural Detail.
Angew.Chem.Int.Ed.Engl., 59, 2020
5VY6
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BU of 5vy6 by Molmil
A self-assembling D-form DNA crystal lattice
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*GP*AP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*CP*A)-3'), ...
Authors:Simmons, C.R, Yan, H.
Deposit date:2017-05-24
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.064 Å)
Cite:Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals.
J. Am. Chem. Soc., 139, 2017
5VCQ
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BU of 5vcq by Molmil
A Hyrdrogen Producing Hybrid Streptavidin-Diiron Catalyst
Descriptor: 2-methylpropyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Streptavidin
Authors:Simmons, C.R, Roy, A, Vaughn, M.D, Allen, J.P, Ghirlanda, G.
Deposit date:2017-03-31
Release date:2018-04-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Enhanced Photocatalytic Hydrogen Production by Hybrid Streptavidin-Diiron Catalysts
To Be Published
5VY7
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BU of 5vy7 by Molmil
A self-assembling L-form DNA crystal lattice
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*GP*AP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*CP*A)-3'), ...
Authors:Simmons, C.R, Yan, H.
Deposit date:2017-05-24
Release date:2017-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals.
J. Am. Chem. Soc., 139, 2017
6V6R
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BU of 6v6r by Molmil
Crystal Structure of a Bromine Derivatized Self-Assembling DNA Crystal Scaffold with Rhombohedral Symmetry.
Descriptor: CACODYLATE ION, DNA (5'-D(*CP*AP*CP*TP*GP*AP*CP*TP*CP*AP*TP*GP*CP*TP*CP*AP*TP*CP*TP*GP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*GP*AP*TP*G)-3'), ...
Authors:Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H.
Deposit date:2019-12-05
Release date:2020-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Self-Assembled Rhombohedral DNA Crystal Scaffold with Tunable Cavity Sizes and High-Resolution Structural Detail.
Angew.Chem.Int.Ed.Engl., 59, 2020

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