1VE9
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![BU of 1ve9 by Molmil](/molmil-images/mine/1ve9) | Porcine kidney D-amino acid oxidase | Descriptor: | BENZOIC ACID, D-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Mizutani, H, Miyahara, I, Hirotsu, K, Nishina, Y, Shiga, K, Setoyama, C, Miura, R. | Deposit date: | 2004-03-29 | Release date: | 2004-04-13 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Three-dimensional structure of porcine kidney D-amino acid oxidase at 3.0 A resolution. J.Biochem., 120, 1996
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3W6V
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![BU of 3w6v by Molmil](/molmil-images/mine/3w6v) | Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA | Descriptor: | AdpA, DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3'), DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3') | Authors: | Yao, M.D, Ohtsuka, J, Nagata, K, Miyazono, K, Ohnishi, Y, Tanokura, M. | Deposit date: | 2013-02-22 | Release date: | 2013-09-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Complex Structure of the DNA-binding Domain of AdpA, the Global Transcription Factor in Streptomyces griseus, and a Target Duplex DNA Reveals the Structural Basis of Its Tolerant DNA Sequence Specificity J.Biol.Chem., 288, 2013
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2HOW
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3WEB
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![BU of 3web by Molmil](/molmil-images/mine/3web) | Crystal structure of a Niemann-Pick type C2 protein from Japanese carpenter ant in complex with oleic acid | Descriptor: | Niemann-Pick type C2 protein, OLEIC ACID | Authors: | Fujimoto, Z, Tsuchiya, W, Ishida, Y, Yamazaki, T. | Deposit date: | 2013-07-02 | Release date: | 2014-02-05 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Niemann-Pick type C2 protein mediating chemical communication in the worker ant Proc.Natl.Acad.Sci.USA, 111, 2014
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3WLV
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![BU of 3wlv by Molmil](/molmil-images/mine/3wlv) | Thermostable urate oxidase from Bacillus sp. TB-90 | Descriptor: | 8-AZAXANTHINE, CHLORIDE ION, POTASSIUM ION, ... | Authors: | Hibi, T, Hayashi, Y, Itoh, T. | Deposit date: | 2013-11-14 | Release date: | 2014-06-18 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.747 Å) | Cite: | Intersubunit salt bridges with a sulfate anion control subunit dissociation and thermal stabilization of Bacillus sp. TB-90 urate oxidase. Biochemistry, 53, 2014
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3WP9
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![BU of 3wp9 by Molmil](/molmil-images/mine/3wp9) | Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. | Descriptor: | Ice-binding protein | Authors: | Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H. | Deposit date: | 2014-01-10 | Release date: | 2014-07-02 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences. Febs J., 281, 2014
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2JPO
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2LDR
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3AP2
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![BU of 3ap2 by Molmil](/molmil-images/mine/3ap2) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP,C4 peptide, and phosphate ion | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ... | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2: Insights into substrate-binding and catalysis of post-translational protein tyrosine sulfation To be Published
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3WI3
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![BU of 3wi3 by Molmil](/molmil-images/mine/3wi3) | Crystal Structure of the Sld3/Treslin domain from yeast Sld3 | Descriptor: | 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION | Authors: | Itou, H, Araki, H, Shirakihara, Y. | Deposit date: | 2013-09-05 | Release date: | 2014-08-20 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin. Structure, 22, 2014
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3WN6
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![BU of 3wn6 by Molmil](/molmil-images/mine/3wn6) | Crystal structure of alpha-amylase AmyI-1 from Oryza sativa | Descriptor: | Alpha-amylase, CALCIUM ION, D(-)-TARTARIC ACID, ... | Authors: | Ochiai, A, Sugai, H, Harada, K, Tanaka, S, Ishiyama, Y, Ito, K, Tanaka, T, Uchiumi, T, Taniguchi, M, Mitsui, T. | Deposit date: | 2013-12-05 | Release date: | 2014-09-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | Crystal structure of alpha-amylase from Oryza sativa: molecular insights into enzyme activity and thermostability Biosci.Biotechnol.Biochem., 78, 2014
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7WY1
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![BU of 7wy1 by Molmil](/molmil-images/mine/7wy1) | Structure of the Oxomolybdenum Mesoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Enanthyl-L-Prolyl-L-Phenylalanine in complex with Styerene | Descriptor: | (2S)-2-[[(2S)-1-heptylpyrrolidin-2-yl]carbonylamino]-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, Oxomolybdenum Mesoporphyrin IX, ... | Authors: | Suzuki, K, Stanfield, J.K, Shisaka, Y, Omura, K, Kasai, C, Sugimoto, H, Shoji, O. | Deposit date: | 2022-02-15 | Release date: | 2023-01-04 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A Compound I Mimic Reveals the Transient Active Species of a Cytochrome P450 Enzyme: Insight into the Stereoselectivity of P450-Catalysed Oxidations. Angew.Chem.Int.Ed.Engl., 62, 2023
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3X37
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![BU of 3x37 by Molmil](/molmil-images/mine/3x37) | Crystal structure of the N-terminal domain of Sld7 in complex with Sld3 | Descriptor: | GLYCEROL, Mitochondrial morphogenesis protein SLD7, ZYRO0C14696p | Authors: | Itou, H, Araki, H, Shirakihara, Y. | Deposit date: | 2015-01-16 | Release date: | 2015-08-19 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3. Acta Crystallogr.,Sect.D, 71, 2015
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7VMC
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![BU of 7vmc by Molmil](/molmil-images/mine/7vmc) | Crystal structure of EF-Tu/CdiA/CdiI | Descriptor: | Contact-dependent inhibitor I, Elongation factor Tu, tRNA nuclease CdiA | Authors: | Wang, J, Yashiro, Y, Tomita, K. | Deposit date: | 2021-10-08 | Release date: | 2022-03-30 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.413 Å) | Cite: | Mechanistic insights into tRNA cleavage by a contact-dependent growth inhibitor protein and translation factors. Nucleic Acids Res., 50, 2022
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3AP3
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![BU of 3ap3 by Molmil](/molmil-images/mine/3ap3) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, Protein-tyrosine sulfotransferase 2 | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction. Nat Commun, 4, 2013
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3AP1
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![BU of 3ap1 by Molmil](/molmil-images/mine/3ap1) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP and C4 peptide | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ... | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Last modified: | 2013-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction. Nat Commun, 4, 2013
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1VD4
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![BU of 1vd4 by Molmil](/molmil-images/mine/1vd4) | Solution structure of the zinc finger domain of TFIIE alpha | Descriptor: | Transcription initiation factor IIE, alpha subunit, ZINC ION | Authors: | Okuda, M, Tanaka, A, Arai, Y, Satoh, M, Okamura, H, Nagadoi, A, Hanaoka, F, Ohkuma, Y, Nishimura, Y. | Deposit date: | 2004-03-18 | Release date: | 2004-10-05 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | A novel zinc finger structure in the large subunit of human general transcription factor TFIIE. J.Biol.Chem., 279, 2004
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2KE4
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2KBT
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![BU of 2kbt by Molmil](/molmil-images/mine/2kbt) | Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method | Descriptor: | Proto-oncogene vav,Immunoglobulin G-binding protein G | Authors: | Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F. | Deposit date: | 2008-12-07 | Release date: | 2009-02-03 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method J.Biomol.Nmr, 43, 2009
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3VOK
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![BU of 3vok by Molmil](/molmil-images/mine/3vok) | X-ray Crystal Structure of Wild Type HrtR in the Apo Form with the Target DNA. | Descriptor: | 5'-D(*AP*TP*GP*AP*CP*AP*CP*TP*GP*TP*GP*TP*CP*AP*T)-3', Transcriptional regulator | Authors: | Sawai, H, Sugimoto, H, Shiro, Y, Aono, S. | Deposit date: | 2012-01-27 | Release date: | 2012-07-25 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural Basis for the Transcriptional Regulation of Heme Homeostasis in Lactococcus lactis. J.Biol.Chem., 287, 2012
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3VP5
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![BU of 3vp5 by Molmil](/molmil-images/mine/3vp5) | X-ray Crystal Structure of Wild Type HrtR in the Holo Form | Descriptor: | CACODYLATE ION, PROTOPORPHYRIN IX CONTAINING FE, Transcriptional regulator | Authors: | Sawai, H, Sugimoto, H, Shiro, Y, Aono, S. | Deposit date: | 2012-02-23 | Release date: | 2012-07-25 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural Basis for the Transcriptional Regulation of Heme Homeostasis in Lactococcus lactis. J.Biol.Chem., 287, 2012
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7VKF
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![BU of 7vkf by Molmil](/molmil-images/mine/7vkf) | Reduced enzyme of FAD-dpendent Glucose Dehydrogenase complex with D-glucono-1,5-lactone at pH8.5 | Descriptor: | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-glucono-1,5-lactone, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ... | Authors: | Nakajima, Y, Nishiya, Y, Ito, K. | Deposit date: | 2021-09-29 | Release date: | 2022-10-05 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5 To Be Published
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7VKD
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1UFM
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![BU of 1ufm by Molmil](/molmil-images/mine/1ufm) | Solution structure of the PCI domain | Descriptor: | COP9 complex subunit 4 | Authors: | Suzuki, S, Hatanaka, H, Kigawa, T, Shirouzu, M, Hayashizaki, Y, The RIKEN Genome Exploration Research Group Phase I & II Teams, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-06-02 | Release date: | 2004-06-29 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution structure of the PCI domain To be Published
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2E5E
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![BU of 2e5e by Molmil](/molmil-images/mine/2e5e) | Solution Structure of Variable-type Domain of Human Receptor for Advanced Glycation Endproducts | Descriptor: | Advanced glycosylation end product-specific receptor | Authors: | Matsumoto, S, Yoshida, T, Yasumatsu, I, Yamamoto, H, Kobayashi, Y, Ohkubo, T. | Deposit date: | 2006-12-20 | Release date: | 2007-12-25 | Last modified: | 2022-03-09 | Method: | SOLUTION NMR | Cite: | Solution Structure of Variable-type Domain of Human Receptor for Advanced Glycation Endproducts to be published
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