3VGM
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![BU of 3vgm by Molmil](/molmil-images/mine/3vgm) | Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose | 分子名称: | Glucokinase, POTASSIUM ION, ZINC ION, ... | 著者 | Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M. | 登録日 | 2011-08-15 | 公開日 | 2011-12-07 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus J.Bacteriol., 194, 2012
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3VGL
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![BU of 3vgl by Molmil](/molmil-images/mine/3vgl) | Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP | 分子名称: | Glucokinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ... | 著者 | Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M. | 登録日 | 2011-08-15 | 公開日 | 2011-12-07 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus J.Bacteriol., 194, 2012
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5Y72
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![BU of 5y72 by Molmil](/molmil-images/mine/5y72) | DMSPP Bound AmbP3 | 分子名称: | AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE | 著者 | Wong, C.P, Awakawa, T, Nakashima, Y. | 登録日 | 2017-08-16 | 公開日 | 2018-07-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3 Angew. Chem. Int. Ed. Engl., 57, 2018
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5VOI
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![BU of 5voi by Molmil](/molmil-images/mine/5voi) | X-ray crystal structure of bacterial RNA polymerase and pyrG promoter complex | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Murakami, K.S, Shin, Y, Turnbough Jr, C.L, Molodtsov, V. | 登録日 | 2017-05-02 | 公開日 | 2017-05-24 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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1T7H
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![BU of 1t7h by Molmil](/molmil-images/mine/1t7h) | X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide | 分子名称: | Endothelin-1 | 著者 | Hoh, F, Cerdan, R, Kaas, Q, Nishi, Y, Chiche, L, Kubo, S, Chino, N, Kobayashi, Y, Dumas, C, Aumelas, A. | 登録日 | 2004-05-10 | 公開日 | 2004-12-21 | 最終更新日 | 2017-10-11 | 実験手法 | X-RAY DIFFRACTION (1.13 Å) | 主引用文献 | High-resolution X-ray structure of the unexpectedly stable dimer of the [Lys(-2)-Arg(-1)-des(17-21)]endothelin-1 peptide Biochemistry, 43, 2004
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3WEB
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![BU of 3web by Molmil](/molmil-images/mine/3web) | Crystal structure of a Niemann-Pick type C2 protein from Japanese carpenter ant in complex with oleic acid | 分子名称: | Niemann-Pick type C2 protein, OLEIC ACID | 著者 | Fujimoto, Z, Tsuchiya, W, Ishida, Y, Yamazaki, T. | 登録日 | 2013-07-02 | 公開日 | 2014-02-05 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Niemann-Pick type C2 protein mediating chemical communication in the worker ant Proc.Natl.Acad.Sci.USA, 111, 2014
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3WLV
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![BU of 3wlv by Molmil](/molmil-images/mine/3wlv) | Thermostable urate oxidase from Bacillus sp. TB-90 | 分子名称: | 8-AZAXANTHINE, CHLORIDE ION, POTASSIUM ION, ... | 著者 | Hibi, T, Hayashi, Y, Itoh, T. | 登録日 | 2013-11-14 | 公開日 | 2014-06-18 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.747 Å) | 主引用文献 | Intersubunit salt bridges with a sulfate anion control subunit dissociation and thermal stabilization of Bacillus sp. TB-90 urate oxidase. Biochemistry, 53, 2014
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5Y84
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![BU of 5y84 by Molmil](/molmil-images/mine/5y84) | Hapalindole U and DMSPP Bound AmbP3 | 分子名称: | AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole U | 著者 | Wong, C.P, Awakawa, T, Nakashima, Y. | 登録日 | 2017-08-18 | 公開日 | 2018-07-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3 Angew. Chem. Int. Ed. Engl., 57, 2018
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1UDY
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![BU of 1udy by Molmil](/molmil-images/mine/1udy) | Medium-Chain Acyl-CoA Dehydrogenase with 3-Thiaoctanoyl-CoA | 分子名称: | 3-THIAOCTANOYL-COENZYME A, Acyl-CoA dehydrogenase, medium-chain specific, ... | 著者 | Satoh, A, Nakajima, Y, Miyahara, I, Hirotsu, K, Tanaka, T, Nishina, Y, Shiga, K, Tamaoki, H, Setoyama, C, Miura, R. | 登録日 | 2003-05-07 | 公開日 | 2003-12-09 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of the transition state analog of medium-chain acyl-CoA dehydrogenase. Crystallographic and molecular orbital studies on the charge-transfer complex of medium-chain acyl-CoA dehydrogenase with 3-thiaoctanoyl-CoA J.BIOCHEM.(TOKYO), 134, 2003
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5Y7C
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![BU of 5y7c by Molmil](/molmil-images/mine/5y7c) | Hapalindole A and DMSPP Bound AmbP3 | 分子名称: | AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole A | 著者 | Wong, C.P, Awakawa, T, Nakashima, Y. | 登録日 | 2017-08-16 | 公開日 | 2018-07-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.003 Å) | 主引用文献 | Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3 Angew. Chem. Int. Ed. Engl., 57, 2018
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1UC4
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![BU of 1uc4 by Molmil](/molmil-images/mine/1uc4) | Structure of diol dehydratase complexed with (S)-1,2-propanediol | 分子名称: | AMMONIUM ION, CYANOCOBALAMIN, POTASSIUM ION, ... | 著者 | Shibata, N, Nakanishi, Y, Fukuoka, M, Yamanishi, M, Yasuoka, N, Toraya, T. | 登録日 | 2003-04-08 | 公開日 | 2003-07-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural rationalization for the lack of stereospecificity in coenzyme B12-dependent diol dehydratase J.BIOL.CHEM., 278, 2003
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5Z43
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![BU of 5z43 by Molmil](/molmil-images/mine/5z43) | Crystal structure of prenyltransferase AmbP1 apo structure | 分子名称: | AmbP1, MAGNESIUM ION | 著者 | Awakawa, T, Nakashima, Y, Mori, T, Abe, I. | 登録日 | 2018-01-10 | 公開日 | 2018-06-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.361 Å) | 主引用文献 | Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1 Angew. Chem. Int. Ed. Engl., 57, 2018
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5Z45
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![BU of 5z45 by Molmil](/molmil-images/mine/5z45) | Crystal structure of prenyltransferase AmbP1 pH6.5 complexed with GSPP and cis-indolyl vinyl isonitrile | 分子名称: | 3-[(Z)-2-isocyanoethenyl]-1H-indole, AmbP1, GERANYL S-THIOLODIPHOSPHATE, ... | 著者 | Awakawa, T, Nakashima, Y, Mori, T, Abe, I. | 登録日 | 2018-01-10 | 公開日 | 2018-06-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.601 Å) | 主引用文献 | Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1 Angew. Chem. Int. Ed. Engl., 57, 2018
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1UMI
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![BU of 1umi by Molmil](/molmil-images/mine/1umi) | Structural basis of sugar-recognizing ubiquitin ligase | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, F-box only protein 2 | 著者 | Mizushima, T, Hirao, T, Yoshida, Y, Lee, S.J, Chiba, T, Iwai, K, Yamaguchi, Y, Kato, K, Tsukihara, T, Tanaka, K. | 登録日 | 2003-10-01 | 公開日 | 2004-04-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis of sugar-recognizing ubiquitin ligase. Nat.Struct.Mol.Biol., 11, 2004
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1UMH
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![BU of 1umh by Molmil](/molmil-images/mine/1umh) | Structural basis of sugar-recognizing ubiquitin ligase | 分子名称: | F-box only protein 2, NICKEL (II) ION | 著者 | Mizushima, T, Hirao, T, Yoshida, Y, Lee, S.J, Chiba, T, Iwai, K, Yamaguchi, Y, Kato, K, Tsukihara, T, Tanaka, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-10-01 | 公開日 | 2004-04-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural basis of sugar-recognizing ubiquitin ligase NAT.STRUCT.MOL.BIOL., 11, 2004
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1V5H
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![BU of 1v5h by Molmil](/molmil-images/mine/1v5h) | Crystal Structure of Human Cytoglobin (Ferric Form) | 分子名称: | Cytoglobin, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Sugimoto, H, Makino, M, Sawai, H, Kawada, N, Yoshizato, K, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-11-23 | 公開日 | 2004-06-08 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis of human cytoglobin for ligand binding. J.Mol.Biol., 339, 2004
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3WI3
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![BU of 3wi3 by Molmil](/molmil-images/mine/3wi3) | Crystal Structure of the Sld3/Treslin domain from yeast Sld3 | 分子名称: | 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION | 著者 | Itou, H, Araki, H, Shirakihara, Y. | 登録日 | 2013-09-05 | 公開日 | 2014-08-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin. Structure, 22, 2014
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5YY0
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![BU of 5yy0 by Molmil](/molmil-images/mine/5yy0) | Crystal structure of the HyhL-HypA complex (form II) | 分子名称: | Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ... | 著者 | Kwon, S, Watanabe, S, Nishitani, Y, Miki, K. | 登録日 | 2017-12-07 | 公開日 | 2018-06-20 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (3.243 Å) | 主引用文献 | Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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3WN6
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![BU of 3wn6 by Molmil](/molmil-images/mine/3wn6) | Crystal structure of alpha-amylase AmyI-1 from Oryza sativa | 分子名称: | Alpha-amylase, CALCIUM ION, D(-)-TARTARIC ACID, ... | 著者 | Ochiai, A, Sugai, H, Harada, K, Tanaka, S, Ishiyama, Y, Ito, K, Tanaka, T, Uchiumi, T, Taniguchi, M, Mitsui, T. | 登録日 | 2013-12-05 | 公開日 | 2014-09-10 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | 主引用文献 | Crystal structure of alpha-amylase from Oryza sativa: molecular insights into enzyme activity and thermostability Biosci.Biotechnol.Biochem., 78, 2014
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1V6R
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![BU of 1v6r by Molmil](/molmil-images/mine/1v6r) | Solution Structure of Endothelin-1 with its C-terminal Folding | 分子名称: | Endothelin-1 | 著者 | Takashima, H, Mimura, N, Ohkubo, T, Yoshida, T, Tamaoki, H, Kobayashi, Y. | 登録日 | 2003-12-03 | 公開日 | 2004-03-16 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Distributed Computing and NMR Constraint-Based High-Resolution Structure
Determination: Applied for Bioactive Peptide Endothelin-1 To Determine C-Terminal
Folding J.Am.Chem.Soc., 126, 2004
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3WEA
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![BU of 3wea by Molmil](/molmil-images/mine/3wea) | |
3ALL
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![BU of 3all by Molmil](/molmil-images/mine/3all) | Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, mutant Y270A | 分子名称: | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, ... | 著者 | Kobayashi, J, Yoshida, H, Yoshikane, Y, Kamitori, S, Yagi, T. | 登録日 | 2010-08-04 | 公開日 | 2011-08-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase To be published
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5YXY
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![BU of 5yxy by Molmil](/molmil-images/mine/5yxy) | Crystal structure of the HyhL-HypA complex (form I) | 分子名称: | Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ... | 著者 | Kwon, S, Watanabe, S, Nishitani, Y, Miki, K. | 登録日 | 2017-12-07 | 公開日 | 2018-06-20 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (3.299 Å) | 主引用文献 | Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
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5Z44
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![BU of 5z44 by Molmil](/molmil-images/mine/5z44) | Crystal structure of prenyltransferase AmbP1 complexed with GSPP | 分子名称: | AmbP1, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION | 著者 | Awakawa, T, Nakashima, Y, Mori, T, Abe, I. | 登録日 | 2018-01-10 | 公開日 | 2018-06-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.458 Å) | 主引用文献 | Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1 Angew. Chem. Int. Ed. Engl., 57, 2018
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3X37
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![BU of 3x37 by Molmil](/molmil-images/mine/3x37) | Crystal structure of the N-terminal domain of Sld7 in complex with Sld3 | 分子名称: | GLYCEROL, Mitochondrial morphogenesis protein SLD7, ZYRO0C14696p | 著者 | Itou, H, Araki, H, Shirakihara, Y. | 登録日 | 2015-01-16 | 公開日 | 2015-08-19 | 最終更新日 | 2017-11-22 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3. Acta Crystallogr.,Sect.D, 71, 2015
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