Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 633 results

2YVT
DownloadVisualize
BU of 2yvt by Molmil
Crystal structure of aq_1956
Descriptor: Hypothetical protein aq_1956
Authors:Ishii, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-15
Release date:2007-10-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of aq_1956
To be Published
3AOC
DownloadVisualize
BU of 3aoc by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Descriptor: Acriflavine resistance protein B, ERYTHROMYCIN A
Authors:Nakashima, R, Sakurai, K, Yamaguchi, A.
Deposit date:2010-09-23
Release date:2011-11-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOD
DownloadVisualize
BU of 3aod by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Descriptor: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, Acriflavine resistance protein B, RIFAMPICIN
Authors:Nakashima, R, Sakurai, K, Yamaguchi, A.
Deposit date:2010-09-23
Release date:2011-11-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOA
DownloadVisualize
BU of 3aoa by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Descriptor: Acriflavine resistance protein B
Authors:Nakashima, R, Sakurai, K, Yamaguchi, A.
Deposit date:2010-09-23
Release date:2011-11-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOB
DownloadVisualize
BU of 3aob by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Descriptor: Acriflavine resistance protein B, RIFAMPICIN
Authors:Nakashima, R, Sakurai, K, Yamaguchi, A.
Deposit date:2010-09-23
Release date:2011-11-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3A55
DownloadVisualize
BU of 3a55 by Molmil
Crystal structure of the A47Q2 mutant of pro- protein-glutaminase
Descriptor: Protein-glutaminase
Authors:Hashizume, R, Yamaguchi, S, Mikami, B.
Deposit date:2009-07-30
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
2ZK9
DownloadVisualize
BU of 2zk9 by Molmil
Crystal Structure of Protein-glutaminase
Descriptor: GLYCEROL, Protein-glutaminase, SODIUM ION
Authors:Hashizume, R.
Deposit date:2008-03-13
Release date:2009-03-17
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
3A56
DownloadVisualize
BU of 3a56 by Molmil
Crystal structure of pro- protein-glutaminase
Descriptor: CITRIC ACID, Protein-glutaminase
Authors:Hashizume, R, Yamaguchi, S, Mikami, B.
Deposit date:2009-07-31
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.728 Å)
Cite:Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
2EY4
DownloadVisualize
BU of 2ey4 by Molmil
Crystal Structure of a Cbf5-Nop10-Gar1 Complex
Descriptor: Probable tRNA pseudouridine synthase B, Ribosome biogenesis protein Nop10, ZINC ION, ...
Authors:Rashid, R, Liang, B, Li, H, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-11-09
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita.
Mol.Cell, 21, 2006
3A54
DownloadVisualize
BU of 3a54 by Molmil
Crystal structure of the A47Q1 mutant of pro-protein-glutaminase
Descriptor: Protein-glutaminase
Authors:Hashizume, R, Yamaguchi, S, Mikami, B.
Deposit date:2009-07-30
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex
J.Biol.Chem., 286, 2011
2E7Y
DownloadVisualize
BU of 2e7y by Molmil
High resolution structure of T. maritima tRNase Z
Descriptor: S-1,2-PROPANEDIOL, SULFATE ION, ZINC ION, ...
Authors:Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The structure of the flexible arm of Thermotoga maritima tRNase Z differs from those of homologous enzymes
Acta Crystallogr.,Sect.F, 63, 2007
5I1V
DownloadVisualize
BU of 5i1v by Molmil
Crystal structure of CrmK, a flavoenzyme involved in the shunt product recycling mechanism in caerulomycin biosynthesis
Descriptor: CrmK, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Picard, M.-E, Barma, J, Shi, R.
Deposit date:2016-02-07
Release date:2017-02-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Biochemical and structural insights into flavoenzyme CrmK reveals a shunt product recycling mechanism in caerulomycin biosynthesis
to be published
5I1W
DownloadVisualize
BU of 5i1w by Molmil
Crystal structure of CrmK, a flavoenzyme involved in the shunt product recycling mechanism in caerulomycin biosynthesis
Descriptor: 4-hydroxy[2,2'-bipyridine]-6-carbaldehyde, 6-(hydroxymethyl)[2,2'-bipyridin]-4-ol, CrmK, ...
Authors:Picard, M.-E, Barma, J, Shi, R.
Deposit date:2016-02-07
Release date:2017-02-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and structural insights into flavoenzyme CrmK reveals a shunt product recycling mechanism in caerulomycin biosynthesis
to be published
6LOD
DownloadVisualize
BU of 6lod by Molmil
Cryo-EM structure of the air-oxidized photosynthetic alternative complex III from Roseiflexus castenholzii
Descriptor: Cytochrome c domain-containing protein, FE3-S4 CLUSTER, Fe-S-cluster-containing hydrogenase components 1-like protein, ...
Authors:Shi, Y, Xin, Y.Y, Wang, C, Blankenship, R.E, Sun, F, Xu, X.L.
Deposit date:2020-01-05
Release date:2020-11-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of the air-oxidized and dithionite-reduced photosynthetic alternative complex III from Roseiflexus castenholzii .
Sci Adv, 6, 2020
6LOE
DownloadVisualize
BU of 6loe by Molmil
Cryo-EM structure of the dithionite-reduced photosynthetic alternative complex III from Roseiflexus castenholzii
Descriptor: Cytochrome c domain-containing protein, FE3-S4 CLUSTER, Fe-S-cluster-containing hydrogenase components 1-like protein, ...
Authors:Shi, Y, Xin, Y.Y, Wang, C, Blankenship, R.E, Sun, F, Xu, X.L.
Deposit date:2020-01-05
Release date:2020-11-04
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of the air-oxidized and dithionite-reduced photosynthetic alternative complex III from Roseiflexus castenholzii .
Sci Adv, 6, 2020
8D8Z
DownloadVisualize
BU of 8d8z by Molmil
Crystal structure of ChoE N147A mutant in complex with thiocholine and chloride
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, CHLORIDE ION, ChoE, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D91
DownloadVisualize
BU of 8d91 by Molmil
Crystal structure of ChoE in complex with acetate and tetraethylammonium (TEA)
Descriptor: ACETATE ION, ChoE, TETRAETHYLAMMONIUM ION
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8W
DownloadVisualize
BU of 8d8w by Molmil
Crystal structure of ChoE with Ser38 adopting alternative conformations
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ChoE, IODIDE ION
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8Y
DownloadVisualize
BU of 8d8y by Molmil
Crystal structure of ChoE N147A mutant in complex with acetylthiocholine
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETYLTHIOCHOLINE, CHLORIDE ION, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D90
DownloadVisualize
BU of 8d90 by Molmil
Crystal structure of ChoE N147A mutant in complex with bromide ions
Descriptor: BROMIDE ION, ChoE, GLYCEROL
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8D8X
DownloadVisualize
BU of 8d8x by Molmil
Crystal structure of ChoE in complex with acetate and thiocholine (crystal form 2)
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2022-06-09
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal structures of bacterial acetylcholinesterase ChoE provide insights into the plasticity of catalytic Ser in regulating the active site geometry and the functional state of the SGNH hydrolases
To be published
8TW1
DownloadVisualize
BU of 8tw1 by Molmil
Crystal structure of Lys2972, a phage endolysin targeting Streptococcus thermophilus
Descriptor: Endolysin Lys2972, GLYCEROL, SODIUM ION
Authors:Zhu, X, Moineau, S, Shi, R.
Deposit date:2023-08-18
Release date:2024-03-27
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Fermentation Practices Select for Thermostable Endolysins in Phages.
Mol.Biol.Evol., 41, 2024
6UQX
DownloadVisualize
BU of 6uqx by Molmil
Crystal structure of ChoE in complex with propionylthiocholine
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ChoE, IODIDE ION, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2019-10-21
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020
6UQW
DownloadVisualize
BU of 6uqw by Molmil
Crystal structure of ChoE in complex with acetate and thiocholine
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, ACETATE ION, ChoE, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2019-10-21
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020
6UR1
DownloadVisualize
BU of 6ur1 by Molmil
Crystal structure of ChoE S38A mutant in complex with acetate and acetylthiocholine
Descriptor: ACETATE ION, ACETYLTHIOCHOLINE, ChoE, ...
Authors:Pham, V.D, Shi, R.
Deposit date:2019-10-21
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural insights into the putative bacterial acetylcholinesterase ChoE and its substrate inhibition mechanism.
J.Biol.Chem., 295, 2020

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon