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PDB: 1457 results

1OMG
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NMR STUDY OF OMEGA-CONOTOXIN MVIIA
Descriptor: OMEGA-CONOTOXIN MVIIA
Authors:Kohno, T, Kim, J.-I, Kobayashi, K, Kodera, Y, Maeda, T, Sato, K.
Deposit date:1995-04-26
Release date:1996-04-03
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Three-dimensional structure in solution of the calcium channel blocker omega-conotoxin MVIIA.
Biochemistry, 34, 1995
7WAG
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Crystal structure of MurJ squeezed form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, DI(HYDROXYETHYL)ETHER, Lipid II flippase MurJ
Authors:Tsukazaki, T, Kohga, H, Tanaka, Y, Yoshikaie, K, Taniguchi, K, Fujimoto, K.
Deposit date:2021-12-14
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the lipid flippase MurJ in a "squeezed" form distinct from its inward- and outward-facing forms.
Structure, 30, 2022
7WAW
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MurJ inward closed form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, lipid II flippase MurJ
Authors:Tsukazaki, T, Kohga, H, Tanaka, Y, Yoshikaie, K, Taniguchi, K, Fujimoto, K.
Deposit date:2021-12-15
Release date:2022-06-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the lipid flippase MurJ in a "squeezed" form distinct from its inward- and outward-facing forms.
Structure, 30, 2022
7WAX
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MurJ inward occluded form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (4S)-2-METHYL-2,4-PENTANEDIOL, lipid II flippase MurJ
Authors:Tsukazaki, T, Kohga, H, Tanaka, Y, Yoshikaie, K, Taniguchi, K, Fujimoto, K.
Deposit date:2021-12-15
Release date:2022-06-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the lipid flippase MurJ in a "squeezed" form distinct from its inward- and outward-facing forms.
Structure, 30, 2022
5IP3
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Tomato spotted wilt tospovirus nucleocapsid protein-ssDNA complex
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3'), ...
Authors:Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M.
Deposit date:2016-03-09
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
1FUT
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CRYSTAL STRUCTURES OF RIBONUCLEASE F1 OF FUSARIUM MONILIFORME IN ITS FREE FORM AND IN COMPLEX WITH 2'GMP
Descriptor: GUANOSINE-2'-MONOPHOSPHATE, RIBONUCLEASE F1
Authors:Katayanagi, K, Vassylyev, D.G, Ishikawa, K, Morikawa, K.
Deposit date:1993-01-18
Release date:1993-10-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of ribonuclease F1 of Fusarium moniliforme in its free form and in complex with 2'GMP.
J.Mol.Biol., 230, 1993
5IP2
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Tomato spotted wilt tospovirus nucleocapsid protein-ssRNA complex
Descriptor: Nucleoprotein, RNA (5'-D(P*UP*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M.
Deposit date:2016-03-09
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
1G0D
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BU of 1g0d by Molmil
CRYSTAL STRUCTURE OF RED SEA BREAM TRANSGLUTAMINASE
Descriptor: PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE, SULFATE ION
Authors:Noguchi, K, Ishikawa, K, Yokoyama, K, Ohtsuka, T, Nio, N, Suzuki, E.
Deposit date:2000-10-06
Release date:2001-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of red sea bream transglutaminase.
J.Biol.Chem., 276, 2001
6D6S
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BU of 6d6s by Molmil
Solution structure of Trigger Factor dimer
Descriptor: Trigger factor
Authors:Saio, T, Kawagoe, S, Ishimori, K, Kalodimos, C.G.
Deposit date:2018-04-22
Release date:2018-06-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Oligomerization of a molecular chaperone modulates its activity.
Elife, 7, 2018
2K4H
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BU of 2k4h by Molmil
Solution structure of the HIV-2 myristoylated Matrix protein
Descriptor: HIV-2 myristoylated matrix protein, MYRISTIC ACID
Authors:Saad, J.S, Ablan, S.D, Ghanam, R.H, Kim, A, Andrews, K, Nagashima, K, Freed, E.O, Summers, M.F.
Deposit date:2008-06-08
Release date:2008-08-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structure of the myristylated human immunodeficiency virus type 2 matrix protein and the role of phosphatidylinositol-(4,5)-bisphosphate in membrane targeting.
J.Mol.Biol., 382, 2008
1FUS
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BU of 1fus by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE F1 OF FUSARIUM MONILIFORME IN ITS FREE FORM AND IN COMPLEX WITH 2'GMP
Descriptor: RIBONUCLEASE F1
Authors:Katayanagi, K, Vassylyev, D.G, Ishikawa, K, Morikawa, K.
Deposit date:1993-01-18
Release date:1993-10-31
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of ribonuclease F1 of Fusarium moniliforme in its free form and in complex with 2'GMP.
J.Mol.Biol., 230, 1993
2JMM
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BU of 2jmm by Molmil
NMR solution structure of a minimal transmembrane beta-barrel platform protein
Descriptor: Outer membrane protein A
Authors:Johansson, M.U, Alioth, S, Hu, K, Walser, R, Koebnik, R, Pervushin, K.
Deposit date:2006-11-20
Release date:2007-07-03
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:A minimal transmembrane beta-barrel platform protein studied by nuclear magnetic resonance
Biochemistry, 46, 2007
2K4I
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BU of 2k4i by Molmil
Solution structure of HIV-2 myrMA bound to di-C4-PI(4,5)P2
Descriptor: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL DIBUTANOATE, HIV-2 myristoylated matrix protein, MYRISTIC ACID
Authors:Saad, J.S, Ablan, S.D, Ghanam, R.H, Kim, A, Andrews, K, Nagashima, K, Freed, E.O, Summers, M.F.
Deposit date:2008-06-08
Release date:2008-08-12
Last modified:2014-01-29
Method:SOLUTION NMR
Cite:Structure of the myristylated human immunodeficiency virus type 2 matrix protein and the role of phosphatidylinositol-(4,5)-bisphosphate in membrane targeting.
J.Mol.Biol., 382, 2008
5IP1
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BU of 5ip1 by Molmil
Tomato spotted wilt tospovirus nucleocapsid protein
Descriptor: Nucleoprotein
Authors:Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M.
Deposit date:2016-03-09
Release date:2017-03-22
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
J. Virol., 91, 2017
2K4E
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BU of 2k4e by Molmil
Solution structure of the HIV-2 UNMYRISTOYLATED MATRIX PROTEIN
Descriptor: HIV-2 unmyristoylated matrix protein
Authors:Saad, J.S, Ablan, S.D, Ghanam, R.H, Kim, A, Andrews, K, Nagashima, K, Freed, E.O, Summers, M.F.
Deposit date:2008-06-07
Release date:2008-08-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the myristylated human immunodeficiency virus type 2 matrix protein and the role of phosphatidylinositol-(4,5)-bisphosphate in membrane targeting.
J.Mol.Biol., 382, 2008
4HE7
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BU of 4he7 by Molmil
Crystal Structure of Brazzein
Descriptor: Defensin-like protein, SODIUM ION
Authors:Nagata, K, Hongo, N, Kameda, Y, Yamamura, A, Sasaki, H, Lee, W.C, Ishikawa, K, Suzuki, E, Tanokura, M.
Deposit date:2012-10-03
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of brazzein, a sweet-tasting protein from the wild African plant Pentadiplandra brazzeana
Acta Crystallogr.,Sect.D, 69, 2013
5YHA
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Crystal structure of Pd(allyl)/Wild Type Polyhedra
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PALLADIUM ION, ...
Authors:Abe, S, Atsumi, K, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2017-09-27
Release date:2017-11-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure of in cell protein crystals containing organometallic complexes.
Phys Chem Chem Phys, 20, 2018
2LHI
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BU of 2lhi by Molmil
Solution structure of Ca2+/CNA1 peptide-bound yCaM
Descriptor: CALCIUM ION, Calmodulin,Serine/threonine-protein phosphatase 2B catalytic subunit A1
Authors:Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
Deposit date:2011-08-10
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
2LHH
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Solution structure of Ca2+-bound yCaM
Descriptor: CALCIUM ION, Calmodulin
Authors:Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
Deposit date:2011-08-10
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
1IQA
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BU of 1iqa by Molmil
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF MOUSE RANK LIGAND
Descriptor: RECEPTOR ACTIVATOR OF NUCLEAR FACTOR KAPPA B LIGAND
Authors:Ito, S, Wakabayashi, K, Ubukata, O, Hayashi, S, Okada, F, Hata, T.
Deposit date:2001-07-11
Release date:2002-03-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the extracellular domain of mouse RANK ligand at 2.2-A resolution.
J.Biol.Chem., 277, 2002
8HGA
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BU of 8hga by Molmil
Monomer structure of transforming growth factor beta induced protein (TGFBIp) G623R fibril
Descriptor: Transforming growth factor-beta-induced protein ig-h3
Authors:Low, J.Y.K, Pervushin, K.
Deposit date:2022-11-14
Release date:2023-07-26
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Release of frustration drives corneal amyloid disaggregation by brain chaperone.
Commun Biol, 6, 2023
8HIA
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BU of 8hia by Molmil
Structure of transforming growth factor beta induced protein (TGFBIp) G623R fibril
Descriptor: Transforming growth factor-beta-induced protein ig-h3
Authors:Low, J.Y.K, Pervushin, K.
Deposit date:2022-11-19
Release date:2023-07-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Release of frustration drives corneal amyloid disaggregation by brain chaperone.
Commun Biol, 6, 2023
5YHB
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BU of 5yhb by Molmil
Crystal structure of Pd(allyl)/polyhedra mutant with deletion of Gly192-Ala194
Descriptor: PALLADIUM ION, Palladium(II) allyl complex, Polyhedrin
Authors:Abe, S, Atsumi, K, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2017-09-27
Release date:2017-11-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of in cell protein crystals containing organometallic complexes.
Phys Chem Chem Phys, 20, 2018
1J03
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BU of 1j03 by Molmil
Solution structure of a putative steroid-binding protein from Arabidopsis
Descriptor: putative steroid binding protein
Authors:Suzuki, S, Hatanaka, H, Kigawa, T, Terada, T, Shirouzu, M, Seki, M, Shinozaki, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-29
Release date:2003-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an Arabidopsis homologue of the mammalian membrane-associated progesterone receptor
To be Published
6JU6
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BU of 6ju6 by Molmil
Aspergillus oryzae active-tyrosinase copper-depleted C92A mutant
Descriptor: NITRATE ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020

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