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PDB: 356 results

1MW7
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BU of 1mw7 by Molmil
X-RAY STRUCTURE OF Y162_HELPY NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PR6
Descriptor: HYPOTHETICAL PROTEIN HP0162
Authors:Kuzin, A, Shen, J, Keller, J.P, Xiao, R, Rost, B, Montelione, G, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2002-09-27
Release date:2003-01-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-RAY STRUCTURE OF Y162_HELPY NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PR6
To be published
5B82
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BU of 5b82 by Molmil
Crystal structure of the cyanobacterial heme-protein Tll0287
Descriptor: CHLORIDE ION, HEME C, Tll0287 protein
Authors:Suga, M, Motomura, T, Shen, J.R.
Deposit date:2016-06-12
Release date:2017-05-03
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and redox properties of a novel cyanobacterial heme protein with a His/Cys heme axial ligation and a Per-Arnt-Sim (PAS)-like domain
J. Biol. Chem., 292, 2017
6WSH
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BU of 6wsh by Molmil
Crystal structure of EutV from Enterococcus faecalis
Descriptor: GLYCEROL, MAGNESIUM ION, Response regulator, ...
Authors:Ataide, S.F, Walshe, J.L.
Deposit date:2020-05-01
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural characterization of the ANTAR antiterminator domain bound to RNA.
Nucleic Acids Res., 50, 2022
4DSI
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BU of 4dsi by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, Se-dGTP and Calcium
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, CALCIUM ION, DNA, ...
Authors:Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
Deposit date:2012-02-19
Release date:2013-03-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published
2A9H
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BU of 2a9h by Molmil
NMR structural studies of a potassium channel / charybdotoxin complex
Descriptor: Voltage-gated potassium channel, charybdotoxin
Authors:Yu, L, Sun, C, Song, D, Shen, J, Xu, N, Gunasekera, A, Hajduk, P.J, Olejniczak, E.T.
Deposit date:2005-07-11
Release date:2006-01-10
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structural studies of a potassium channel-charybdotoxin complex.
Biochemistry, 44, 2005
4DSJ
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BU of 4dsj by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, dGTP and Calcium
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA, ...
Authors:Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
Deposit date:2012-02-19
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published
6VG3
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BU of 6vg3 by Molmil
Structure of unliganded, inactive PTK7 kinase domain
Descriptor: Inactive tyrosine-protein kinase 7
Authors:Malhotra, K, Stayrook, S.E, Sheetz, J, Lemmon, M.A.
Deposit date:2020-01-07
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into receptor tyrosine kinase pseudokinase function
Mol.Cell, 2020
6WY2
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BU of 6wy2 by Molmil
Crystal structure of RNA-10mer: CCGG(N4-methyl-C)GCCGG
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA-10mer: CCGG(4-methyl-C)GCCGG
Authors:Sekula, B, Ruszkowski, M, Mao, S, Haruehanroengra, P, Sheng, J.
Deposit date:2020-05-12
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.928 Å)
Cite:Base pairing, structural and functional insights into N4-methylcytidine (m4C) and N4,N4-dimethylcytidine (m42C) modified RNA.
Nucleic Acids Res., 48, 2020
7D32
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BU of 7d32 by Molmil
The TBA-Pb2+ complex in P41212 space group
Descriptor: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'), LEAD (II) ION
Authors:Liu, H.H, Gao, Y.Q, Sheng, J, Gan, J.H.
Deposit date:2020-09-18
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.707 Å)
Cite:Structure-guided development of Pb 2+ -binding DNA aptamers.
Sci Rep, 12, 2022
7D33
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BU of 7d33 by Molmil
The Pb2+ complexed structure of TBA G8C mutant
Descriptor: DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*CP*TP*GP*GP*TP*TP*GP*G)-3'), LEAD (II) ION
Authors:Liu, H.H, Gao, Y.Q, Sheng, J, Gan, J.H.
Deposit date:2020-09-18
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:Structure-guided development of Pb 2+ -binding DNA aptamers.
Sci Rep, 12, 2022
4DWI
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BU of 4dwi by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with self complementary DNA, Se-dGTP and Calcium
Descriptor: 9-METHYLGUANINE, CALCIUM ION, DNA (5'-D(*AP*CP*TP*GP*GP*AP*TP*CP*CP*A)-3'), ...
Authors:Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
Deposit date:2012-02-24
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published
4DSK
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BU of 4dsk by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, PPi and Calcium
Descriptor: CALCIUM ION, DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), ...
Authors:Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
Deposit date:2012-02-19
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published
7SKR
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BU of 7skr by Molmil
BtSCoV-Rf1.2004 Papain-Like protease bound to the non-covalent inhibitor 37
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(2-methoxypyridin-4-yl)methyl]-2-[(1R)-1-(naphthalen-1-yl)ethyl]-2-azaspiro[3.3]heptane-6-carboxamide, ...
Authors:Durie, I, Shepard, J, Freitas, B, O'Boyle, B, Enos, S, Pegan, S.D.
Deposit date:2021-10-21
Release date:2022-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Exploring Noncovalent Protease Inhibitors for the Treatment of Severe Acute Respiratory Syndrome and Severe Acute Respiratory Syndrome-Like Coronaviruses.
Acs Infect Dis., 8, 2022
7VD6
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BU of 7vd6 by Molmil
Structure of S1M1-type FCPII complex from diatom
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Nagao, R, Kato, K, Akita, F, Miyazaki, N, Shen, J.R.
Deposit date:2021-09-06
Release date:2022-03-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for different types of hetero-tetrameric light-harvesting complexes in a diatom PSII-FCPII supercomplex
Nat Commun, 13, 2022
6JEO
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BU of 6jeo by Molmil
Structure of PSI tetramer from Anabaena
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Nagao, R, Shen, J.R, Miyazaki, N, Akita, F.
Deposit date:2019-02-06
Release date:2019-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a cyanobacterial photosystem I tetramer revealed by cryo-electron microscopy.
Nat Commun, 10, 2019
3A0H
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BU of 3a0h by Molmil
Crystal structure of I-substituted Photosystem II complex
Descriptor: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ...
Authors:Kawakami, K, Umena, Y, Kamiya, N, Shen, J.-R.
Deposit date:2009-03-17
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4 Å)
Cite:Location of chloride and its possible functions in oxygen-evolving photosystem II revealed by X-ray crystallography
Proc.Natl.Acad.Sci.USA, 106, 2009
5H99
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BU of 5h99 by Molmil
Crystal structure of Geobacter metallireducens SMUG1 mutant N58D
Descriptor: Geobacter metallireducens SMUG1
Authors:Xie, W, Cao, W, Zhang, Z, Shen, J.
Deposit date:2015-12-26
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis of Substrate Specificity in Geobacter metallireducens SMUG1
Acs Chem.Biol., 11, 2016
5H9I
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BU of 5h9i by Molmil
Crystal structure of Geobacter metallireducens SMUG1 with xanthine
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Geobacter metallireducens SMUG1, ...
Authors:Xie, W, Cao, W, Zhang, Z, Shen, J.
Deposit date:2015-12-28
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural Basis of Substrate Specificity in Geobacter metallireducens SMUG1
Acs Chem.Biol., 11, 2016
3CGY
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BU of 3cgy by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol
Descriptor: RADICICOL, Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3CGZ
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BU of 3cgz by Molmil
Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain
Descriptor: Virulence sensor histidine kinase phoQ
Authors:Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
Deposit date:2008-03-06
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
2GSW
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BU of 2gsw by Molmil
Crystal Structure of the Putative NADPH-dependent Azobenzene FMN-Reductase YhdA from Bacillus subtilis, Northeast Structural Genomics Target SR135
Descriptor: FLAVIN MONONUCLEOTIDE, yhdA
Authors:Forouhar, F, Hussain, M, Jayaraman, S, Shen, J, Cooper, B, Cunningham, K, Janjua, H, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-04-26
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Crystal Structure of the Putative NADPH-dependent Azobenzene FMN-Reductase YhdA from Bacillus subtilis, Northeast Structural Genomics Target SR135
To be Published
6WNQ
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BU of 6wnq by Molmil
E. coli ATP Synthase State 2a
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2020-04-23
Release date:2020-06-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6WNR
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BU of 6wnr by Molmil
E. coli ATP synthase State 3b
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2020-04-23
Release date:2020-06-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6OQV
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BU of 6oqv by Molmil
E. coli ATP Synthase State 2b
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-04-29
Release date:2020-06-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6OQW
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BU of 6oqw by Molmil
E. coli ATP synthase State 3a
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Stewart, A.G, Sobti, M, Walshe, J.L.
Deposit date:2019-04-29
Release date:2020-06-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020

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