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PDB: 354 件

2DA8
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SOLUTION STRUCTURE OF A COMPLEX BETWEEN (N-MECYS3,N-MECYS7)TANDEM AND (D(GATATC))2
分子名称: 2-CARBOXYQUINOXALINE, DNA (5'-D(*GP*AP*TP*AP*TP*C)-3'), TRIOSTIN A
著者Addess, K.J, Sinsheimer, J.S, Feigon, J.
登録日1993-04-09
公開日1994-01-31
最終更新日2017-11-01
実験手法SOLUTION NMR
主引用文献Solution Structure of a Complex between [N-Mecys3,N-Mecys7]Tandem and [D(Gatatc)]2.
Biochemistry, 32, 1993
4K7B
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Crystal structure of Extrinsic protein in photosystem II
分子名称: Extrinsic protein in photosystem II, GLYCEROL, SULFATE ION
著者Nagao, R, Suga, M, Niikura, A, Okumura, A, Koua, F.H.M, Suzuki, T, Tomo, T, Enami, I, Shen, J.R.
登録日2013-04-16
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Psb31, a Novel Extrinsic Protein of Photosystem II from a Marine Centric Diatom and Implications for Its Binding and Function
Biochemistry, 52, 2013
1G5S
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CRYSTAL STRUCTURE OF HUMAN CYCLIN DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH THE INHIBITOR H717
分子名称: 2-[TRANS-(4-AMINOCYCLOHEXYL)AMINO]-6-(BENZYL-AMINO)-9-CYCLOPENTYLPURINE, CELL DIVISION PROTEIN KINASE 2
著者Dreyer, M.K, Borcherding, D.R, Dumont, J.A, Peet, N.P, Tsay, J.T, Wright, P.S, Bitonti, A.J, Shen, J, Kim, S.-H.
登録日2000-11-02
公開日2001-11-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal structure of human cyclin-dependent kinase 2 in complex with the adenine-derived inhibitor H717.
J.Med.Chem., 44, 2001
4NKJ
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Structure of influenza B virus hemagglutinin at membrane fusion pH
分子名称: Hemagglutinin HA2
著者Ni, F, Chen, X, Shen, J, Wang, Q.
登録日2013-11-12
公開日2014-04-02
実験手法X-RAY DIFFRACTION (2.4535 Å)
主引用文献Structural insights into the membrane fusion mechanism mediated by influenza virus hemagglutinin.
Biochemistry, 53, 2014
3A0B
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Crystal structure of Br-substituted Photosystem II complex
分子名称: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ...
著者Kawakami, K, Umena, Y, Kamiya, N, Shen, J.-R.
登録日2009-03-16
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Location of chloride and its possible functions in oxygen-evolving photosystem II revealed by X-ray crystallography
Proc.Natl.Acad.Sci.USA, 106, 2009
2F7Z
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Protein Kinase A bound to (R)-1-(1H-Indol-3-ylmethyl)-2-(2-pyridin-4-yl-[1,7]naphtyridin-5-yloxy)-ehylamine
分子名称: (1S)-1-(1H-INDOL-3-YLMETHYL)-2-(2-PYRIDIN-4-YL-[1,7]NAPHTYRIDIN-5-YLOXY)-EHYLAMINE, PKI, inhibitory peptide, ...
著者Li, Q, Woods, K.W, Thomas, S, Zhu, G.D, Packard, G, Fisher, J, Li, T, Gong, J, Dinges, J, Song, X, Abrams, J, Luo, Y, Johnson, E.F, Shi, Y, Liu, X, Klinghofer, V, Des Jong, R, Oltersdorf, T, Stoll, V.S, Jakob, C.G, Rosenberg, S.H, Giranda, V.L.
登録日2005-12-01
公開日2006-06-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Synthesis and structure-activity relationship of 3,4'-bispyridinylethylenes: discovery of a potent 3-isoquinolinylpyridine inhibitor of protein kinase B (PKB/Akt) for the treatment of cancer.
Bioorg.Med.Chem.Lett., 16, 2006
2FBW
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Avian respiratory complex II with carboxin bound
分子名称: (~{Z})-2-oxidanylbut-2-enedioic acid, 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, AZIDE ION, ...
著者Huang, L.S, Sun, G, Cobessi, D, Wang, A.C, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A.
登録日2005-12-10
公開日2005-12-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献3-nitropropionic acid is a suicide inhibitor of mitochondrial respiration that, upon oxidation by complex II, forms a covalent adduct with a catalytic base arginine in the active site of the enzyme.
J.Biol.Chem., 281, 2006
3A0H
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Crystal structure of I-substituted Photosystem II complex
分子名称: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ...
著者Kawakami, K, Umena, Y, Kamiya, N, Shen, J.-R.
登録日2009-03-17
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Location of chloride and its possible functions in oxygen-evolving photosystem II revealed by X-ray crystallography
Proc.Natl.Acad.Sci.USA, 106, 2009
2JU6
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Solid-State Protein Structure Determination with Proton-Detected Triple Resonance 3D Magic-Angle Spinning NMR Spectroscopy
分子名称: Immunoglobulin G-binding protein G
著者Zhou, D.H, Shea, J.J, Nieuwkoop, A.J, Franks, W, Wylie, B.J, Mullen, C, Sandoz, D, Rienstra, C.M.
登録日2007-08-15
公開日2007-12-04
最終更新日2024-05-29
実験手法SOLID-STATE NMR
主引用文献Solid-State Protein-Structure Determination with Proton-Detected Triple-Resonance 3D Magic-Angle-Spinning NMR Spectroscopy.
Angew.Chem.Int.Ed.Engl., 46, 2007
3WG7
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A 1.9 angstrom radiation damage free X-ray structure of large (420KDa) protein by femtosecond crystallography
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Hirata, K, Shinzawa-Itoh, K, Yano, N, Takemura, S, Kato, K, Hatanaka, M, Muramoto, K, Kawahara, T, Tsukihara, T, Yamashita, E, Tono, K, Ueno, G, Hikima, T, Murakami, H, Inubushi, Y, Yabashi, M, Ishikawa, T, Yamamoto, M, Ogura, T, Sugimoto, H, Shen, J.R, Yoshikawa, S, Ago, H.
登録日2013-07-29
公開日2014-04-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Determination of damage-free crystal structure of an X-ray-sensitive protein using an XFEL.
Nat.Methods, 11, 2014
3J35
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Cryo-EM reconstruction of Dengue virus at 37 C
分子名称: envelope protein
著者Zhang, X.Z, Sheng, J, Plevka, P, Kuhn, R.J, Diamond, M.S, Rossmann, M.G.
登録日2013-02-24
公開日2013-04-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Dengue structure differs at the temperatures of its human and mosquito hosts.
Proc.Natl.Acad.Sci.USA, 110, 2013
2AMI
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Solution Structure Of The Calcium-loaded N-Terminal Sensor Domain Of Centrin
分子名称: Caltractin
著者Hu, H.T, Fagan, P.A, Bunick, C.G, Sheehan, J.H, Chazin, W.J.
登録日2005-08-09
公開日2005-08-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the N-terminal calcium sensor domain of centrin reveals the biochemical basis for domain-specific function.
J.Biol.Chem., 281, 2006
2H88
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Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution
分子名称: AZIDE ION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
登録日2006-06-06
公開日2006-06-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
3CGY
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Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol
分子名称: RADICICOL, Virulence sensor histidine kinase phoQ
著者Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
登録日2008-03-06
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
3CGZ
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Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain
分子名称: Virulence sensor histidine kinase phoQ
著者Guarnieri, M.T, Zhang, L, Shen, J, Zhao, R.
登録日2008-03-06
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ.
J.Mol.Biol., 379, 2008
2LUH
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NMR structure of the Vta1-Vps60 complex
分子名称: Vacuolar protein sorting-associated protein VTA1, Vacuolar protein-sorting-associated protein 60
著者Yang, Z, Vild, C, Ju, J, Zhang, X, Liu, J, Shen, J, Zhao, B, Lan, W, Gong, F, Liu, M, Cao, C, Xu, Z.
登録日2012-06-13
公開日2012-11-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis of Molecular Recognition between ESCRT-III-like Protein Vps60 and AAA-ATPase Regulator Vta1 in the Multivesicular Body Pathway.
J.Biol.Chem., 287, 2012
1GML
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crystal structure of the mouse CCT gamma apical domain (triclinic)
分子名称: GLYCEROL, T-COMPLEX PROTEIN 1 SUBUNIT GAMMA
著者Pappenberger, G, Wilsher, J.A, Roe, S.M, Willison, K.R, Pearl, L.H.
登録日2001-09-17
公開日2002-06-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Cct Gamma Apical Domain:: Implications for Substrate Binding to the Eukaryotic Cytosolic Chaperonin
J.Mol.Biol., 318, 2002
1GN1
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crystal structure of the mouse CCT gamma apical domain (monoclinic)
分子名称: CALCIUM ION, CCT-GAMMA
著者Pappenberger, G, Wilsher, J.A, Roe, S.M, Willison, K.R, Pearl, L.H.
登録日2001-10-01
公開日2002-06-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the Cct Gamma Apical Domain:: Implications for Substrate Binding to the Eukaryotic Cytosolic Chaperonin
J.Mol.Biol., 318, 2002
2H89
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Avian Respiratory Complex II with Malonate Bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
登録日2006-06-06
公開日2006-06-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
3BM0
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Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC
分子名称: 5'-D(*GP*(2'-Se-U)P*GP*(5-Se-U)P*AP*CP*AP*C)-3'
著者Jiang, J, SHeng, J, Hassan, A.E, Huang, Z.
登録日2007-12-11
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis and crystallographic analysis of 5-Se-thymidine DNAs.
Org.Lett., 11, 2009
2NSK
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Doubled Modified Selenium DNA
分子名称: 5'-D(*GP*(UMS)P*GP*(T4S)P*AP*CP*AP*C)-3'
著者Jiang, J, Shen, J, Huang, Z.
登録日2006-11-04
公開日2006-11-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Double Modified Selinium DNA [G(Use)G(Tse)ACAC]
To be Published
2GSW
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Crystal Structure of the Putative NADPH-dependent Azobenzene FMN-Reductase YhdA from Bacillus subtilis, Northeast Structural Genomics Target SR135
分子名称: FLAVIN MONONUCLEOTIDE, yhdA
著者Forouhar, F, Hussain, M, Jayaraman, S, Shen, J, Cooper, B, Cunningham, K, Janjua, H, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2006-04-26
公開日2006-05-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal Structure of the Putative NADPH-dependent Azobenzene FMN-Reductase YhdA from Bacillus subtilis, Northeast Structural Genomics Target SR135
To be Published
1HZ2
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SOLUTION NMR STRUCTURE OF SELF-COMPLEMENTARY DUPLEX 5'-D(AGGCG*CCT)2 CONTAINING A TRIMETHYLENE CROSSLINK AT THE N2 POSITION OF G*. MODEL OF A MALONDIALDEHYDE CROSSLINK
分子名称: DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3'), PROPANE
著者Dooley, P.A, Tsarouhtsis, D, Korbel, G.A, Nechev, L.V, Shearer, J, Zegar, I.S, Harris, C.M, Stone, M.P, Harris, T.M.
登録日2001-01-23
公開日2001-02-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural studies of an oligodeoxynucleotide containing a trimethylene interstrand cross-link in a 5'-(CpG) motif: model of a malondialdehyde cross-link.
J.Am.Chem.Soc., 123, 2001
2HC7
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2'-selenium-T A-DNA [G(TSe)GTACAC]
分子名称: 5'-D(*GP*(2ST)P*GP*TP*AP*CP*AP*C)-3'
著者Jiang, J, Sheng, J, Huang, Z.
登録日2006-06-15
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of 2'-Selenium modified T A-DNA G(TSe)GTACAC
TO BE PUBLISHED
2H05
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Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC
分子名称: 5'-D(*GP*TP*GP*(BRU)P*AP*CP*AP*C)-3'
著者Jiang, J, Sheng, J, Huang, Z.
登録日2006-05-14
公開日2006-05-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007

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