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PDB: 39 件

7MJA
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HLA-A*24:02 bound to Neuroblastoma derived PHOX2B peptide
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Toor, J.S, Tripathi, S.M, Truong, H.V, Yarmarkovich, M, Maris, J.M, Sgourakis, N.G.
登録日2021-04-19
公開日2021-08-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs.
Nature, 599, 2021
7MJ8
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HLA-A*02:01 bound to Neuroblastoma Derived IGFBPL1 peptide
分子名称: Beta-2-microglobulin, GLYCEROL, Insulin-like growth factor-binding protein-like 1 peptide, ...
著者Toor, J.S, Tripathi, S.M, Truong, H.V, Yarmarkovich, M, Maris, J.M, Sgourakis, N.G.
登録日2021-04-19
公開日2021-08-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs.
Nature, 599, 2021
7RY6
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Solution NMR structural bundle of the first cyclization domain from yersiniabactin synthetase (Cy1) impacted by dynamics
分子名称: HMWP2 nonribosomal peptide synthetase
著者Kancherla, A.K, Mishra, S.H, Marincin, K.A, Nerli, S, Sgourakis, N.G, Dowling, D.P, Bouvignies, G, Frueh, D.P.
登録日2021-08-24
公開日2022-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Global protein dynamics as communication sensors in peptide synthetase domains.
Sci Adv, 8, 2022
6O0I
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NMR ensemble of computationally designed protein XAA
分子名称: Design construct XAA
著者Wei, K.Y, Moschidi, D, Nerli, S, Sgourakis, N, Baker, D.
登録日2019-02-16
公開日2020-04-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
Proc.Natl.Acad.Sci.USA, 117, 2020
6O0C
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NMR ensemble of computationally designed protein XAA_GVDQ mutant M4L
分子名称: Design construct XAA_GVDQ mutant M4L
著者Wei, K.Y, Moschidi, D, Nerli, S, Sgourakis, N, Baker, D.
登録日2019-02-15
公開日2020-04-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
Proc.Natl.Acad.Sci.USA, 117, 2020
7RNO
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BU of 7rno by Molmil
Model of the Ac-6-FP/hpMR1/bB2m/TAPBPR complex from integrated docking, NMR and restrained MD
分子名称: Beta-2-microglobulin, Major histocompatibility complex class I-related gene protein, N-(6-formyl-4-oxo-3,4-dihydropteridin-2-yl)acetamide, ...
著者McShan, A.C, Sgourakis, N.G.
登録日2021-07-29
公開日2022-05-11
最終更新日2022-08-10
実験手法SOLUTION NMR
主引用文献TAPBPR employs a ligand-independent docking mechanism to chaperone MR1 molecules.
Nat.Chem.Biol., 18, 2022
6MPP
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HLA-A*01:01 complex with NRAS Q61K peptide by NMR
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-1 alpha chain, ...
著者Flores-Solis, D, McShan, A.C, Sgourakis, N.G.
登録日2018-10-08
公開日2019-10-16
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献MHC-I complex determined by NMR
To Be Published
6NPR
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Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
分子名称: ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
著者Toor, J, McShan, A.C, Tripathi, S.M, Sgourakis, N.G.
登録日2019-01-18
公開日2020-01-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Molecular determinants of chaperone interactions on MHC-I for folding and antigen repertoire selection.
Proc.Natl.Acad.Sci.USA, 116, 2019
6NAN
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BU of 6nan by Molmil
NMR structure determination of Ixolaris and Factor X interaction reveals a noncanonical mechanism of Kunitz inhibition
分子名称: Ixolaris
著者De Paula, V.S, Sgourakis, N.G, Francischetti, I.M.B, Almeida, F.C.L, Monteiro, R.Q, Valente, A.P.
登録日2018-12-06
公開日2019-06-12
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献NMR structure determination of Ixolaris and factor X(a) interaction reveals a noncanonical mechanism of Kunitz inhibition.
Blood, 134, 2019
2MV0
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BU of 2mv0 by Molmil
Solution NMR Structure of Maltose-binding protein from Escherichia coli, Northeast Structural Genomics Consortium (NESG) Target ER690
分子名称: Maltose-binding periplasmic protein
著者Rossi, P, Lange, O.F, Sgourakis, N.G, Song, Y, Lee, H, Aramini, J.M, Ertekin, A, Xiao, R, Acton, T.B, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2014-09-18
公開日2014-12-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples.
Proc.Natl.Acad.Sci.USA, 109, 2012
2LPZ
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BU of 2lpz by Molmil
Atomic model of the Type-III Secretion System Needle
分子名称: Protein prgI
著者Loquet, A, Sgourakis, N.G, Gupta, R, Giller, K, Riedel, D, Goosmann, C, Griesinger, C, Kolbe, M.G, Baker, D, Becker, S, Lange, A.
登録日2012-02-21
公開日2012-05-16
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Atomic model of the type III secretion system needle.
Nature, 486, 2012
2M89
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Solution structure of the Aha1 dimer from Colwellia psychrerythraea
分子名称: Aha1 domain protein
著者Rossi, P, Sgourakis, N.G, Shi, L, Liu, G, Barbieri, C.M, Lee, H, Grant, T.D, Luft, J.R, Xiao, R, Acton, T.B, Montelione, G.T, Snell, E.H, Baker, D, Lange, O.A, Northeast Structural Genomics Consortium (NESG)
登録日2013-05-09
公開日2013-09-04
最終更新日2024-05-01
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献A hybrid NMR/SAXS-based approach for discriminating oligomeric protein interfaces using Rosetta.
Proteins, 83, 2015
2MJZ
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BU of 2mjz by Molmil
Capsid model of M13 bacteriophage virus from Magic-angle spinning NMR and Rosetta modeling
分子名称: Capsid protein G8P
著者Morag, O, Sgourakis, N.G, Baker, D, Goldbourt, A.
登録日2014-01-22
公開日2015-01-07
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The NMR-Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope.
Proc.Natl.Acad.Sci.USA, 112, 2015
2MME
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BU of 2mme by Molmil
Hybrid structure of the Shigella flexneri MxiH Type three secretion system needle
分子名称: MxiH
著者Demers, J.P, Habenstein, B, Loquet, A, Vasa, S.K, Becker, S, Baker, D, Lange, A, Sgourakis, N.G.
登録日2014-03-14
公開日2014-10-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.7 Å), SOLID-STATE NMR
主引用文献High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy.
Nat Commun, 5, 2014
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