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PDB: 788 results

6ZBI
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BU of 6zbi by Molmil
Ternary complex of Calmodulin bound to 2 molecules of NHE1
Descriptor: CALCIUM ION, Calmodulin-1, Sodium/hydrogen exchanger 1
Authors:Prestel, A, Kragelund, B.B, Pedersen, E.S, Pedersen, S.F, Sjoegaard-Frich, L.M.
Deposit date:2020-06-08
Release date:2021-03-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dynamic Na + /H + exchanger 1 (NHE1) - calmodulin complexes of varying stoichiometry and structure regulate Ca 2+ -dependent NHE1 activation.
Elife, 10, 2021
6SLW
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BU of 6slw by Molmil
Fragment AZ-004 binding at the TAZpS89/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 4-methyl-5-phenyl-thiophene-2-carboximidamide, WW domain-containing transcription regulator protein 1
Authors:Ottmann, C, Wolter, M, Guillory, X, Leysen, S, Genet, S, Somsen, B, Patel, J, Castaldi, P.
Deposit date:2019-08-20
Release date:2020-06-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
1XS6
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BU of 1xs6 by Molmil
dCTP deaminase from Escherichia coli. E138A mutant enzyme in complex with dUTP
Descriptor: DEOXYURIDINE-5'-TRIPHOSPHATE, Deoxycytidine triphosphate deaminase, MAGNESIUM ION
Authors:Johansson, E, Fano, M, Bynck, J.H, Neuhard, J, Larsen, S, Sigurskjold, B.W, Christensen, U, Willemoes, M.
Deposit date:2004-10-18
Release date:2004-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of dCTP deaminase from Escherichia coli with bound substrate and product: reaction mechanism and determinants of mono- and bifunctionality for a family of enzymes
J.Biol.Chem., 280, 2005
1OCX
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BU of 1ocx by Molmil
E. coli maltose-O-acetyltransferase
Descriptor: MALTOSE O-ACETYLTRANSFERASE, TRIMETHYL LEAD ION
Authors:Lo Leggio, L, Dal Degan, F, Poulsen, P, Larsen, S.
Deposit date:2003-02-11
Release date:2003-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Structure and Specificity of Escherichia Coli Maltose Acetyltransferase Give New Insight Into the Laca Family of Acyltransferases.
Biochemistry, 42, 2003
6SLV
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BU of 6slv by Molmil
Fragment AZ-013 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 4-(methylamino)-7-propan-2-yloxy-1-benzothiophene-2-carboximidamide, CHLORIDE ION, ...
Authors:Ottmann, C, Wolter, M, Guillory, X, Leysen, S, Genet, S, Somsen, B, Patel, J, Castaldi, P.
Deposit date:2019-08-20
Release date:2020-06-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6F5K
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BU of 6f5k by Molmil
Crystal structure of laccase from Myceliophthora thermophila
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Ernst, H.A, Joergensen, L.J, Piontek, K, Bukh, C, Oestergaard, L.H, Larsen, S, Bjerrum, M.J.
Deposit date:2017-12-01
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:A comparative structural analysis of the surface properties of asco-laccases.
Plos One, 13, 2018
1HJS
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BU of 1hjs by Molmil
Structure of two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BETA-1,4-GALACTANASE, ...
Authors:Le Nours, J, Ryttersgaard, C, Lo Leggio, L, Ostergaard, P.R, Borchert, T.V, Christensen, L.L.H, Larsen, S.
Deposit date:2003-02-27
Release date:2003-06-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of Two Fungal Beta-1,4-Galactanases: Searching for the Basis for Temperature and Ph Optimum
Protein Sci., 12, 2003
1XS4
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BU of 1xs4 by Molmil
dCTP deaminase from Escherichia coli- E138A mutant enzyme in complex with dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxycytidine triphosphate deaminase, MAGNESIUM ION
Authors:Johansson, E, Fano, M, Bynck, J.H, Neuhard, J, Larsen, S, Sigurskjold, B.W, Christensen, U, Willemoes, M.
Deposit date:2004-10-18
Release date:2004-12-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structures of dCTP deaminase from Escherichia coli with bound substrate and product: reaction mechanism and determinants of mono- and bifunctionality for a family of enzymes
J.Biol.Chem., 280, 2005
1C86
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BU of 1c86 by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B (R47V,D48N) COMPLEXED WITH 2-(OXALYL-AMINO-4,7-DIHYDRO-5H-THIENO[2,3-C]PYRAN-3-CARBOXYLIC ACID
Descriptor: 2-(OXALYL-AMINO)-4,7-DIHYDRO-5H-THIENO[2,3-C]PYRAN-3-CARBOXYLIC ACID, PROTEIN (PROTEIN-TYROSINE PHOSPHATASE 1B)
Authors:Iversen, L.F, Andersen, H.S, Mortensen, S.B, Moller, N.P.
Deposit date:2000-04-16
Release date:2000-05-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based design of a low molecular weight, nonphosphorus, nonpeptide, and highly selective inhibitor of protein-tyrosine phosphatase 1B.
J.Biol.Chem., 275, 2000
2J6X
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BU of 2j6x by Molmil
The crystal structure of lactate oxidase
Descriptor: FLAVIN MONONUCLEOTIDE, LACTATE OXIDASE, ZINC ION
Authors:Leiros, I, Wang, E, Rasmussen, T, Oksanen, E, Repo, H, Petersen, S.B, Heikinheimo, P, Hough, E.
Deposit date:2006-10-05
Release date:2006-10-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The 2.1 A Structure of Aerococcus Viridans L-Lactate Oxidase (Lox).
Acta Crystallogr.,Sect.F, 62, 2006
3C1U
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BU of 3c1u by Molmil
D192N mutant of Rhamnogalacturonan acetylesterase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Rhamnogalacturonan acetylesterase
Authors:Langkilde, A, Lo Leggio, L, Navarro Poulsen, J.C, Molgaard, A, Larsen, S.
Deposit date:2008-01-24
Release date:2008-08-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Short strong hydrogen bonds in proteins: a case study of rhamnogalacturonan acetylesterase
ACTA CRYSTALLOGR.,SECT.D, 64, 2008
8PEH
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BU of 8peh by Molmil
Crystal structure of Lotus japonicus SYMRK kinase domain D738N
Descriptor: 1,2-ETHANEDIOL, Receptor-like kinase SYMRK, SULFATE ION
Authors:Noergaard, M.M.M, Gysel, K, Hansen, S.B, Andersen, K.R.
Deposit date:2023-06-14
Release date:2024-02-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphorylation of the alpha-I motif in SYMRK drives root nodule organogenesis.
Proc.Natl.Acad.Sci.USA, 121, 2024
6GYV
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BU of 6gyv by Molmil
Lariat-capping ribozyme (circular permutation form)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lariat-capping ribozyme, MAGNESIUM ION, ...
Authors:Masquida, B, Meyer, M, Nielsen, H, Olieric, V, Roblin, P, Johansen, S.D, Westhof, E.
Deposit date:2018-07-02
Release date:2018-08-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.50003624 Å)
Cite:Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
1OYR
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BU of 1oyr by Molmil
Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis
Descriptor: CADMIUM ION, Ribonuclease PH, SULFATE ION
Authors:Harlow, L.S, Kadziola, A, Jensen, K.F, Larsen, S.
Deposit date:2003-04-07
Release date:2004-03-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis and implications for its quaternary structure and tRNA binding.
Protein Sci., 13, 2004
1M6Z
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BU of 1m6z by Molmil
Crystal structure of reduced recombinant cytochrome c4 from Pseudomonas stutzeri
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome c4, GLYCEROL, ...
Authors:Noergaard, A, Harris, P, Larsen, S, Christensen, H.E.M.
Deposit date:2002-07-18
Release date:2003-09-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural comparison of recombinant Pseudomonas stutzeri cytochrome c4 in two oxidation states
To be Published
2JEN
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BU of 2jen by Molmil
Family 12 xyloglucanase from Bacillus licheniformis in complex with ligand
Descriptor: 1,4-DIETHYLENE DIOXIDE, ENDO-BETA-1,4-GLUCANASE, GLYCEROL, ...
Authors:Gloster, T.M, Ibatullin, F.M, Macauley, K, Eklof, J.M, Roberts, S, Turkenburg, J.P, Bjornvad, M.E, Jorgensen, P.L, Danielsen, S, Johansen, K.S, Borchert, T.V, Wilson, K.S, Brumer, H, Davies, G.J.
Deposit date:2007-01-18
Release date:2007-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Characterization and Three-Dimensional Structures of Two Distinct Bacterial Xyloglucanases from Families Gh5 and Gh12.
J.Biol.Chem., 282, 2007
1NI1
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BU of 1ni1 by Molmil
Imidazole and cyanophenyl farnesyl transferase inhibitors
Descriptor: 2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)- METHOXYMETHYL]-NICOTINONITRILE, ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID, Protein farnesyltransferase alpha subunit, ...
Authors:Tong, Y, Lin, N.H, Wang, L, Hasvold, L, Wang, W, Leonard, N, Li, T, Li, Q, Cohen, J, Gu, W.Z, Zhang, H, Stoll, V, Bauch, J, Marsh, K, Rosenberg, S.H, Sham, H.L.
Deposit date:2002-12-20
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of potent imidazole and cyanophenyl containing farnesyltransferase inhibitors with improved oral bioavailability.
Bioorg.Med.Chem.Lett., 13, 2003
1RMG
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BU of 1rmg by Molmil
RHAMNOGALACTURONASE A FROM ASPERGILLUS ACULEATUS
Descriptor: RHAMNOGALACTURONASE A, alpha-D-glucopyranose, alpha-D-mannopyranose, ...
Authors:Petersen, T.N, Kauppinen, S, Larsen, S.
Deposit date:1997-02-26
Release date:1998-03-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of rhamnogalacturonase A from Aspergillus aculeatus: a right-handed parallel beta helix.
Structure, 5, 1997
1ELM
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BU of 1elm by Molmil
CADMIUM-SUBSTITUTED BOVINE PACREATIC CARBOXYPEPTIDASE A (ALFA-FORM) AT PH 5.5 AND 2 MM CHLORIDE IN MONOCLINIC CRYSTAL FORM.
Descriptor: CADMIUM ION, CARBOXYPEPTIDASE A
Authors:Jensen, F, Bukrinsky, T, Bjerrum, J, Larsen, S.
Deposit date:2000-03-14
Release date:2002-06-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three high-resolution crystal structures of cadmium-substituted carboxypeptidase A provide insight into the enzymatic function
J.BIOL.INORG.CHEM., 7, 2002
1EE3
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BU of 1ee3 by Molmil
Cadmium-substituted bovine pancreatic carboxypeptidase A (alfa-form) at pH 7.5 and 2 mM chloride in monoclinic crystal form
Descriptor: CADMIUM ION, PROTEIN (CARBOXYPEPTIDASE A)
Authors:Jensen, F, Bukrinsky, T, Bjerrum, J, Larsen, S.
Deposit date:2000-01-30
Release date:2002-06-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Three high-resolution crystal structures of cadmium-substituted carboxypeptidase A provide insight into the enzymatic function
J.BIOL.INORG.CHEM., 7, 2002
1ELL
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BU of 1ell by Molmil
CADMIUM-SUBSTITUTED BOVINE PANCREATIC CARBOXYPEPTIDASE A (ALFA-FORM) AT PH 7.5 AND 0.25 M CHLORIDE IN MONOCLINIC CRYSTAL FORM.
Descriptor: CADMIUM ION, CARBOXYPEPTIDASE A
Authors:Jensen, F, Bukrinsky, T, Bjerrum, J, Larsen, S.
Deposit date:2000-03-14
Release date:2002-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Three high-resolution crystal structures of cadmium-substituted carboxypeptidase A provide insight into the enzymatic function
J.BIOL.INORG.CHEM., 7, 2002
8GBJ
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BU of 8gbj by Molmil
Cryo-EM structure of a human BCDX2/ssDNA complex
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*CP*C)-3'), DNA repair protein RAD51 homolog 2, DNA repair protein RAD51 homolog 3, ...
Authors:Jia, L, Wasmuth, E.V, Ruben, E.A, Sung, P, Rawal, Y, Greene, E.C, Meir, A, Olsen, S.K.
Deposit date:2023-02-26
Release date:2023-06-21
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural insights into BCDX2 complex function in homologous recombination.
Nature, 619, 2023
1F76
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BU of 1f76 by Molmil
ESCHERICHIA COLI DIHYDROOROTATE DEHYDROGENASE
Descriptor: Dihydroorotate dehydrogenase (quinone), FLAVIN MONONUCLEOTIDE, FORMIC ACID, ...
Authors:Norager, S, Jensen, K.F, Bjornberg, O, Larsen, S.
Deposit date:2000-06-26
Release date:2002-10-16
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:E. coli Dihydroorotate Dehydrogenase Reveals Structural and Functional Distinction between different classes of dihydroorotate dehydrogenases
Structure, 10, 2002
5ND7
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BU of 5nd7 by Molmil
Microtubule-bound MKLP2 motor domain in the presence of AMPPNP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF20A, ...
Authors:Atherton, J, Yu, I.-M, Cook, A, Muretta, J.M, Joseph, A.P, Major, J, Sourigues, Y, Clause, J, Topf, M, Rosenfeld, S.S, Houdusse, A, Moores, C.A.
Deposit date:2017-03-07
Release date:2017-10-04
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:The divergent mitotic kinesin MKLP2 exhibits atypical structure and mechanochemistry.
Elife, 6, 2017
1PRB
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BU of 1prb by Molmil
STRUCTURE OF AN ALBUMIN-BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: PROTEIN PAB
Authors:Johansson, M.U, De Chateau, M, Wikstrom, M, Forsen, S, Drakenberg, T, Bjorck, L.
Deposit date:1997-01-15
Release date:1997-07-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the albumin-binding GA module: a versatile bacterial protein domain.
J.Mol.Biol., 266, 1997

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