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PDB: 24 results

1SN8
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BU of 1sn8 by Molmil
Crystal structure of the S1 domain of RNase E from E. coli (Pb derivative)
Descriptor: LEAD (II) ION, Ribonuclease E
Authors:Schubert, M, Edge, R.E, Lario, P, Cook, M.A, Strynadka, N.C.J, Mackie, G.A, McIntosh, L.P.
Deposit date:2004-03-10
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces.
J.Mol.Biol., 341, 2004
1SMX
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BU of 1smx by Molmil
Crystal structure of the S1 domain of RNase E from E. coli (native)
Descriptor: Ribonuclease E
Authors:Schubert, M, Edge, R.E, Lario, P, Cook, M.A, Strynadka, N.C.J, Mackie, G.A, McIntosh, L.P.
Deposit date:2004-03-09
Release date:2004-08-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces.
J.Mol.Biol., 341, 2004
1SLJ
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BU of 1slj by Molmil
Solution structure of the S1 domain of RNase E from E. coli
Descriptor: Ribonuclease E
Authors:Schubert, M, Edge, R.E, Lario, P, Cook, M.A, Strynadka, N.C.J, Mackie, G.A, McIntosh, L.P.
Deposit date:2004-03-05
Release date:2004-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces.
J.Mol.Biol., 341, 2004
2JPP
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BU of 2jpp by Molmil
Structural basis of RsmA/CsrA RNA recognition: Structure of RsmE bound to the Shine-Dalgarno sequence of hcnA mRNA
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*CP*GP*GP*AP*UP*GP*AP*AP*GP*CP*CP*C)-3'), Translational repressor
Authors:Schubert, M, Lapouge, K, Duss, O, Oberstrass, F.C, Jelesarov, I, Haas, D, Allain, F.H.-T.
Deposit date:2007-05-21
Release date:2007-08-21
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Molecular basis of messenger RNA recognition by the specific bacterial repressing clamp RsmA/CsrA
Nat.Struct.Mol.Biol., 14, 2007
2LIE
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BU of 2lie by Molmil
NMR structure of the lectin CCL2
Descriptor: CCL2 lectin
Authors:Schubert, M, Walti, M.A, Egloff, P, Bleuler-Martinez, S, Aebi, M, Allain, F.F.-H, Kunzler, M.
Deposit date:2011-08-29
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Plasticity of the beta-Trefoil Protein Fold in the Recognition and Control of Invertebrate Predators and Parasites by a Fungal Defence System
Plos Pathog., 8, 2012
2LIQ
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BU of 2liq by Molmil
Solution structure of CCL2 in complex with glycan
Descriptor: CCL2 lectin, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
Authors:Schubert, M, Bleuler-Martinez, S, Walti, M.A, Egloff, P, Aebi, M, Kuenzler, M, Allain, F.H.-T.
Deposit date:2011-08-30
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Plasticity of the beta-Trefoil Protein Fold in the Recognition and Control of Invertebrate Predators and Parasites by a Fungal Defence System
Plos Pathog., 8, 2012
2MK1
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BU of 2mk1 by Molmil
Solution structure of Lactodifucotetraose (LDFT) beta anomer
Descriptor: alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]beta-D-glucopyranose
Authors:Schubert, M, Allain, F.H.-T.
Deposit date:2014-01-22
Release date:2015-02-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Secondary Structural Element in a Wide Range of Fucosylated Glycoepitopes.
Chemistry, 23, 2017
4USO
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BU of 4uso by Molmil
X-ray structure of the CCL2 lectin in complex with sialyl lewis X
Descriptor: CCL2 LECTIN, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Bleuler-Martinez, S, Varrot, A, Schubert, M, Stutz, M, Sieber, R, Hengartner, M, Aebi, M, Kunzler, M.
Deposit date:2014-07-11
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Dimerization of the fungal defense lectin CCL2 is essential for its toxicity against nematodes.
Glycobiology, 27, 2017
4USP
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BU of 4usp by Molmil
X-ray structure of the dimeric CCL2 lectin in native form
Descriptor: CCL2 LECTIN, CHLORIDE ION, PHOSPHATE ION
Authors:Bleuler-Martinez, S, Varrot, A, Schubert, M, Stutz, M, Sieber, R, Hengartner, M, Aebi, M, Kunzler, M.
Deposit date:2014-07-11
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Dimerization of the fungal defense lectin CCL2 is essential for its toxicity against nematodes.
Glycobiology, 27, 2017
8A0C
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BU of 8a0c by Molmil
Capsular polysaccharide synthesis multienzyme in complex with CMP
Descriptor: Bcs3, CYTIDINE-5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
Deposit date:2022-05-27
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
8A0M
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BU of 8a0m by Molmil
Capsular polysaccharide synthesis multienzyme in complex with capsular polymer fragment
Descriptor: Bcs3, MAGNESIUM ION, beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate
Authors:Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
Deposit date:2022-05-29
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
2K32
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BU of 2k32 by Molmil
Truncated AcrA from Campylobacter jejuni for glycosylation studies
Descriptor: A
Authors:Slynko, V, Schubert, M, Numao, S, Kowarik, M, Aebi, M, Allain, F.
Deposit date:2008-04-17
Release date:2009-02-03
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation.
J.Am.Chem.Soc., 131, 2009
2K33
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BU of 2k33 by Molmil
Solution structure of an N-glycosylated protein using in vitro glycosylation
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-[beta-D-glucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose, AcrA
Authors:Slynko, V, Schubert, M, Numao, S, Kowarik, M, Aebi, M, Allain, F.H.-T.
Deposit date:2008-04-18
Release date:2009-02-03
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation.
J.Am.Chem.Soc., 131, 2009
6EU9
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BU of 6eu9 by Molmil
Crystal structure of Platynereis dumerilii RAR ligand-binding domain in complex with all-trans retinoic acid
Descriptor: RETINOIC ACID, Retinoic acid receptor
Authors:Handberg-Thorsager, M, Gutierrez-Mazariegos, J, Arold, S.T, Nadendla, E.K, Bertucci, P.Y, Germain, P, Tomancak, P, Pierzchalski, K, Jones, J.W, Albalat, R, Kane, M.A, Bourguet, W, Laudet, V, Arendt, D, Schubert, M.
Deposit date:2017-10-29
Release date:2018-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:The ancestral retinoic acid receptor was a low-affinity sensor triggering neuronal differentiation.
Sci Adv, 4, 2018
1M8M
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BU of 1m8m by Molmil
SOLID-STATE MAS NMR STRUCTURE OF THE A-SPECTRIN SH3 DOMAIN
Descriptor: SPECTRIN ALPHA CHAIN, BRAIN
Authors:Castellani, F, Van Rossum, B, Diehl, A, Schubert, M, Rehbein, K, Oschkinat, H.
Deposit date:2002-07-25
Release date:2002-11-20
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy
Nature, 420, 2002
2MF0
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BU of 2mf0 by Molmil
Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer L of RsmZ(1-72)/RsmE(dimer) 1to3 complex
Descriptor: Carbon storage regulator homolog, RNA_(72-MER)
Authors:Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
Deposit date:2013-10-02
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
2MF1
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BU of 2mf1 by Molmil
Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer R of RsmZ(1-72)/RsmE(dimer) 1to3 complex
Descriptor: Carbon storage regulator homolog, RNA_(72-MER)
Authors:Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
Deposit date:2013-10-02
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
2MFF
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BU of 2mff by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL3)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, SL3(RsmZ) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-11
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
2N7A
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BU of 2n7a by Molmil
Solution structure of the human Siglec-8 lectin domain
Descriptor: Sialic acid-binding Ig-like lectin 8
Authors:Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
Deposit date:2015-09-07
Release date:2016-07-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016
2MFG
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BU of 2mfg by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL4)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, SL4(RsmZ) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-11
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
2MFC
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BU of 2mfc by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL1)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, SL1(RsmZ) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-10
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
2MFH
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BU of 2mfh by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(36-44)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, RsmZ(36-44) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-11
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
2MFE
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BU of 2mfe by Molmil
Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL2)/RsmE(dimer) 2:1 complex
Descriptor: Carbon storage regulator homolog, SL2(RsmZ) RNA
Authors:Duss, O, Diarra Dit Konte, N, Michel, E, Schubert, M, Allain, F.H.-T.
Deposit date:2013-10-11
Release date:2014-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for the wide range of affinity found in Csr/Rsm protein-RNA recognition.
Nucleic Acids Res., 42, 2014
2N7B
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BU of 2n7b by Molmil
Solution structure of the human Siglec-8 lectin domain in complex with 6'sulfo sialyl Lewisx
Descriptor: 3-aminopropan-1-ol, N-acetyl-alpha-neuraminic acid-(2-3)-6-O-sulfo-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, Sialic acid-binding Ig-like lectin 8
Authors:Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
Deposit date:2015-09-07
Release date:2016-07-06
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016

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