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PDB: 568 results

6CFX
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BU of 6cfx by Molmil
Bosea sp GapR solved in the presence of DNA
Descriptor: PHOSPHATE ION, UPF0335 protein ASE63_04290
Authors:Schumacher, M.A.
Deposit date:2018-02-18
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.
Cell, 175, 2018
4YJ1
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BU of 4yj1 by Molmil
Crystal structure of T. brucei MRB1590-ADP bound to poly-U RNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Uncharacterized protein
Authors:Schumacher, M.A.
Deposit date:2015-03-03
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of the T. brucei kRNA editing factor MRB1590 reveal unique RNA-binding pore motif contained within an ABC-ATPase fold.
Nucleic Acids Res., 43, 2015
3MKY
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BU of 3mky by Molmil
Structure of SopB(155-323)-18mer DNA complex, I23 form
Descriptor: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
Authors:Schumacher, M.A, Piro, K, Xu, W.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
6GY1
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BU of 6gy1 by Molmil
rat COMT in complex with inhibitor
Descriptor: 7-fluoranyl-5-(4-methylphenyl)sulfonyl-quinolin-8-ol, Catechol O-methyltransferase, DIMETHYL SULFOXIDE, ...
Authors:Schulze, M.-S.
Deposit date:2018-06-27
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Optimization of 8-Hydroxyquinolines as Inhibitors of Catechol O-Methyltransferase.
J. Med. Chem., 61, 2018
8TGE
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BU of 8tge by Molmil
Crystal structure of the Methanosarcina mazei glutamine synthetase in complex with GlnK1
Descriptor: Glutamine synthetase, Nitrogen regulatory protein GlnK1
Authors:Schumacher, M.A.
Deposit date:2023-07-12
Release date:2023-11-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
3VEA
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BU of 3vea by Molmil
Crystal Structure of matP-matS23mer
Descriptor: 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', Macrodomain Ter protein
Authors:Schumacher, M.A.
Deposit date:2012-01-07
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Mol.Cell, 48, 2012
5K5R
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BU of 5k5r by Molmil
AspA-32mer DNA,crystal form 2
Descriptor: AspA, DNA (32-MER), PHOSPHATE ION
Authors:Schumacher, M.
Deposit date:2016-05-23
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
5K98
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BU of 5k98 by Molmil
Structure of HipA-HipB-O2-O3 complex
Descriptor: Antitoxin HipB, DNA (5'-D(*CP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*G)-3'), ...
Authors:Schumacher, M.
Deposit date:2016-05-31
Release date:2016-06-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.99 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
8SVA
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BU of 8sva by Molmil
Structure of the Rhodococcus sp. USK13 DarR-20 bp DNA complex
Descriptor: DNA (5'-D(*TP*AP*GP*AP*TP*AP*CP*TP*CP*CP*GP*GP*AP*GP*TP*AP*TP*CP*TP*A)-3'), PHOSPHATE ION, TetR/AcrR family transcriptional regulator
Authors:Schumacher, M.A.
Deposit date:2023-05-15
Release date:2023-11-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structures of the DarR transcription regulator reveal unique modes of second messenger and DNA binding.
Nat Commun, 14, 2023
8SUA
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BU of 8sua by Molmil
Structure of M. baixiangningiae DarR-ligand complex
Descriptor: 3-azanyl-3-(hydroxymethyl)-1,5,7,11-tetraoxa-6$l^{4}-boraspiro[5.5]undecan-9-ol, DarR
Authors:Schumacher, M.A.
Deposit date:2023-05-11
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of the DarR transcription regulator reveal unique modes of second messenger and DNA binding.
Nat Commun, 14, 2023
8P3E
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BU of 8p3e by Molmil
Crystal structure of glucocerebrosidase in complex with allosteric activator
Descriptor: 2-[[3-[(4-chlorophenyl)carbamoyl]phenyl]sulfonylamino]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Schulze, M.-S.
Deposit date:2023-05-17
Release date:2024-03-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Identification of ss-Glucocerebrosidase Activators for Glucosylceramide hydrolysis.
Chemmedchem, 19, 2024
5IXL
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BU of 5ixl by Molmil
Structure of P. vulgaris HigB toxin Y91A variant
Descriptor: CHLORIDE ION, Endoribonuclease HigB
Authors:Schureck, M.A, Repack, A.A, Miles, S.J, Marquez, J, Dunham, C.M.
Deposit date:2016-03-23
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mechanism of endonuclease cleavage by the HigB toxin.
Nucleic Acids Res., 44, 2016
4YZV
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BU of 4yzv by Molmil
Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Schureck, M.A, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2015-03-25
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Defining the mRNA recognition signature of a bacterial toxin protein.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YPB
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BU of 4ypb by Molmil
Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Schureck, M.A, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2015-03-12
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Defining the mRNA recognition signature of a bacterial toxin protein.
Proc.Natl.Acad.Sci.USA, 112, 2015
5K58
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BU of 5k58 by Molmil
Structure of the K. pneumonia SlmA-DNA complex bound to the C-terminal of the cell division protein FtsZ
Descriptor: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), Nucleoid occlusion factor SlmA, Octapeptide
Authors:Schumacher, M.
Deposit date:2016-05-23
Release date:2016-06-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.772 Å)
Cite:Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
8TFK
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BU of 8tfk by Molmil
Cryo-EM structure of the Methanosarcina mazei glutamine synthetase (GS) with Met-Sox-P and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Schumacher, M.A.
Deposit date:2023-07-11
Release date:2023-11-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
8TFB
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BU of 8tfb by Molmil
Cryo-EM structure of the Methanosarcina mazei apo glutamin synthetase structure: dodecameric form
Descriptor: Glutamine synthetase, MAGNESIUM ION
Authors:Schumacher, M.A.
Deposit date:2023-07-09
Release date:2023-11-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
4ZSN
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BU of 4zsn by Molmil
70S-wild-type HigB toxin complex bound to a AAA lysine codon
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Schureck, M.A, Dunham, C.M.
Deposit date:2015-05-13
Release date:2016-09-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Mechanism of endonuclease cleavage by the HigB toxin.
Nucleic Acids Res., 44, 2016
6P5R
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BU of 6p5r by Molmil
Structure of T. brucei MERS1-GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial edited mRNA stability factor 1
Authors:Schumacher, M.A.
Deposit date:2019-05-30
Release date:2019-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
8BAR
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BU of 8bar by Molmil
E. coli C7 DarT1 in complex with ADP-ribosylated ssDNA and nicotinamide
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5-DIPHOSPHORIBOSE, DNA (5'-D(*AP*AP*GP*AP*C)-3'), ...
Authors:Schuller, M, Ariza, A.
Deposit date:2022-10-11
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Molecular basis for the reversible ADP-ribosylation of guanosine bases.
Mol.Cell, 83, 2023
8BAS
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BU of 8bas by Molmil
E. coli C7 DarT1 in complex with carba-NAD and DNA
Descriptor: 1,2-ETHANEDIOL, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, DNA (5'-D(*AP*AP*GP*AP*C)-3'), ...
Authors:Schuller, M, Ariza, A.
Deposit date:2022-10-11
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Molecular basis for the reversible ADP-ribosylation of guanosine bases.
Mol.Cell, 83, 2023
4YG1
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BU of 4yg1 by Molmil
HipB-O1-O2 complex/P21212 crystal form
Descriptor: Antitoxin HipB, DNA (48-MER)
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
3M9A
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BU of 3m9a by Molmil
Protein structure of type III plasmid segregation TubR
Descriptor: Putative DNA-binding protein
Authors:Schumacher, M.A, Ni, L.
Deposit date:2010-03-21
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MKZ
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BU of 3mkz by Molmil
Structure of SopB(155-272)-18mer complex, P21 form
Descriptor: CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB
Authors:Schumacher, M.A.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3M8K
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BU of 3m8k by Molmil
Protein structure of type III plasmid segregation TubZ
Descriptor: FtsZ/tubulin-related protein
Authors:Schumacher, M.A, Ni, L.
Deposit date:2010-03-18
Release date:2010-07-07
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010

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