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PDB: 200 results

8ADE
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BU of 8ade by Molmil
Wild type ATTR amyloid fibril from senile systemic amyloidosis
Descriptor: Transthyretin
Authors:Schmidt, M, Steinebrei, M.
Deposit date:2022-07-08
Release date:2022-11-23
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Cryo-EM structure of an ATTRwt amyloid fibril from systemic non-hereditary transthyretin amyloidosis.
Nat Commun, 13, 2022
6BAO
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BU of 6bao by Molmil
Stigmatella aurantiaca phytochrome photosensory core module, wild type
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-14
Release date:2018-09-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
2BW9
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BU of 2bw9 by Molmil
Laue Structure of L29W MbCO
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schmidt, M, Nienhaus, K, Pahl, R, Krasselt, A, Anderson, S, Parak, F, Nienhaus, G.U, Srajer, V.
Deposit date:2005-07-13
Release date:2005-07-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Ligand Migration Pathway and Protein Dynamics in Myoglobin: A Time-Resolved Crystallographic Study on L29W Mbco.
Proc.Natl.Acad.Sci.USA, 102, 2005
2BWH
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BU of 2bwh by Molmil
Laue Structure of a Short Lived State of L29W Myoglobin
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schmidt, M, Nienhaus, K, Pahl, R, Krasselt, A, Anderson, S, Parak, F, Nienhaus, G.U, Srajer, V.
Deposit date:2005-07-14
Release date:2005-07-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
5AEF
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BU of 5aef by Molmil
Electron cryo-microscopy of an Abeta(1-42)amyloid fibril
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Schmidt, M, Rohou, A, Lasker, K, Yadav, J.K, Schiene-Fischer, C, Fandrich, M, Grigorieff, N.
Deposit date:2015-08-29
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Peptide Dimer Structure in an Abeta(1-42) Fibril Visualized with Cryo-Em
Proc.Natl.Acad.Sci.USA, 112, 2015
4CS3
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BU of 4cs3 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in complex with an adenylated furan-bearing noncanonical amino acid and pyrophosphate
Descriptor: 1,2-ETHANEDIOL, 2-(furan-2-yl)ethyl hydrogen carbonate, ADENOSINE MONOPHOSPHATE, ...
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
6P73
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BU of 6p73 by Molmil
Cytochrome-C-nitrite reductase
Descriptor: CALCIUM ION, Cytochrome c-552, HEME C
Authors:Schmidt, M, Pacheco, A.
Deposit date:2019-06-04
Release date:2020-04-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Trapping of a Putative Intermediate in the CytochromecNitrite Reductase (ccNiR)-Catalyzed Reduction of Nitrite: Implications for the ccNiR Reaction Mechanism.
J.Am.Chem.Soc., 141, 2019
2C7K
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BU of 2c7k by Molmil
Laue structure of phycoerythrocyanin from Mastigocladus laminosus
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-24
Release date:2006-01-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alpha-Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
2C7J
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BU of 2c7j by Molmil
Phycoerythrocyanin from Mastigocladus laminosus, 295 K, 3.0 A
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-24
Release date:2006-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alfa- Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
2C7L
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BU of 2c7l by Molmil
Low temperature structure of phycoerythrocyanin from Mastigocladus laminosus
Descriptor: BILIVERDINE IX ALPHA, PHYCOCYANOBILIN, PHYCOERYTHROCYANIN ALPHA CHAIN, ...
Authors:Schmidt, M, Krasselt, A, Reuter, W.
Deposit date:2005-11-25
Release date:2006-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Local Protein Flexibility as a Prerequisite for Reversible Chromophore Isomerization in Alpha-Phycoerythrocyanin
Biochim.Biophys.Acta, 1764, 2006
1S4S
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BU of 1s4s by Molmil
Reaction Intermediate in the Photocycle of PYP, intermediate occupied between 100 micro-seconds to 5 milli-seconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
Deposit date:2004-01-17
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
6BAK
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BU of 6bak by Molmil
The structure of the Stigmatella aurantiaca phytochrome chromophore binding domain T289H mutant
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-13
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
6BAP
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BU of 6bap by Molmil
Stigmatella aurantiaca bacterial phytochrome PAS-GAF-PHY, T289H mutant
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-14
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
6BAY
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BU of 6bay by Molmil
Stigmatella aurantiaca bacterial phytochrome P1, PAS-GAF-PHY T289H mutant, room temperature structure
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-16
Release date:2018-09-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
4CS4
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BU of 4cs4 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in complex with AMPPNP
Descriptor: 1,2-ETHANEDIOL, 2-{[dihydroxy(4-aminoethylphenyl)-{4}-sulfanyl]amino}-3-hydroxypropanoic acid, MAGNESIUM ION, ...
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
4CS2
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BU of 4cs2 by Molmil
Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in its apo form
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PYRROLYSINE--TRNA LIGASE
Authors:Schmidt, M.J, Weber, A, Pott, M, Welte, W, Summerer, D.
Deposit date:2014-03-04
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Furan-Amino Acid Recognition by a Polyspecific Aminoacyl-tRNA-Synthetase and its Genetic Encoding in Human Cells.
Chembiochem, 15, 2014
6BAF
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BU of 6baf by Molmil
Structure of the chromophore binding domain of Stigmatella aurantiaca phytochrome P1, wild-type
Descriptor: 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2017-10-12
Release date:2018-09-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for light control of cell development revealed by crystal structures of a myxobacterial phytochrome.
IUCrJ, 5, 2018
4K71
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BU of 4k71 by Molmil
Crystal structure of a high affinity Human Serum Albumin variant bound to the Neonatal Fc Receptor
Descriptor: Beta-2-microglobulin, IgG receptor FcRn large subunit p51, SULFATE ION, ...
Authors:Schmidt, M.M, Townson, S.A, Andreucci, A, Dombrowski, C, Erbe, D.V, King, B, Kovalchin, J.T, Masci, A, Murillo, A, Schirmer, E.B, Furfine, E.S, Barnes, T.M.
Deposit date:2013-04-16
Release date:2013-10-23
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of an HSA/FcRn complex reveals recycling by competitive mimicry of HSA ligands at a pH-dependent hydrophobic interface.
Structure, 21, 2013
1S4R
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BU of 1s4r by Molmil
Structure of a reaction intermediate in the photocycle of PYP extracted by a SVD-driven analysis
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
Deposit date:2004-01-17
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
1BS3
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BU of 1bs3 by Molmil
P.SHERMANII SOD(FE+3) FLUORIDE
Descriptor: FE (III) ION, FLUORIDE ION, SUPEROXIDE DISMUTASE
Authors:Schmidt, M.
Deposit date:1998-08-31
Release date:1999-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Manipulating the coordination mumber of the ferric iron within the cambialistic superoxide dismutase of Propionibacterium shermanii by changing the pH-value A crystallographic analysis
Eur.J.Biochem., 262, 1999
1BSM
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BU of 1bsm by Molmil
P.SHERMANII SOD(FE+3) 140K PH8
Descriptor: FE (III) ION, SUPEROXIDE DISMUTASE
Authors:Schmidt, M.
Deposit date:1998-08-28
Release date:1999-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Manipulating the coordination mumber of the ferric iron within the cambialistic superoxide dismutase of Propionibacterium shermanii by changing the pH-value A crystallographic analysis
Eur.J.Biochem., 262, 1999
1BT8
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BU of 1bt8 by Molmil
P.SHERMANII SOD(FE+3) PH 10.0
Descriptor: FE (III) ION, SUPEROXIDE DISMUTASE
Authors:Schmidt, M.
Deposit date:1998-09-01
Release date:1999-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Manipulating the coordination mumber of the ferric iron within the cambialistic superoxide dismutase of Propionibacterium shermanii by changing the pH-value A crystallographic analysis
Eur.J.Biochem., 262, 1999
1AVM
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BU of 1avm by Molmil
THE CAMBIALISTIC SUPEROXIDE DISMUTASE (FE-SOD) OF P. SHERMANII COORDINATED BY AZIDE
Descriptor: AZIDE ION, FE (III) ION, SUPEROXIDE DISMUTASE
Authors:Schmidt, M, Parak, F.
Deposit date:1997-09-17
Release date:1998-03-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Structure of the Azide Coordinated Superoxide Dismutase of P. Shermanii Investigated by X-Ray Structure Analysis, Exafs, Mossbauer-and Epr Spectroscopy
Inorg.Chim.Acta., 275-276, 1998
7JRI
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BU of 7jri by Molmil
High-resolution Crystal Structures of Transient Intermediates in the Phytochrome Photocycle, 33 ms structure
Descriptor: 3-[2-[[5-[[(3E,4S)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2020-08-12
Release date:2021-04-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Structure, 29, 2021
7JR5
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BU of 7jr5 by Molmil
Real Time Reaction Intermediates in Stigmatella Bacteriophytochrome P2
Descriptor: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M.
Deposit date:2020-08-11
Release date:2021-10-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Structure, 29, 2021

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