Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 140 results

3IPO
DownloadVisualize
BU of 3ipo by Molmil
Crystal structure of YnjE
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, ...
Authors:Haenzelmann, P, Kuper, J, Schindelin, H.
Deposit date:2009-08-18
Release date:2009-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains.
Protein Sci., 18, 2009
3IPP
DownloadVisualize
BU of 3ipp by Molmil
crystal structure of sulfur-free YnjE
Descriptor: GLYCEROL, PHOSPHATE ION, Putative thiosulfate sulfurtransferase ynjE, ...
Authors:Haenzelmann, P, Kuper, J, Schindelin, H.
Deposit date:2009-08-18
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of YnjE from Escherichia coli, a sulfurtransferase with three rhodanese domains.
Protein Sci., 18, 2009
5L6H
DownloadVisualize
BU of 5l6h by Molmil
Uba1 in complex with Ub-ABPA3 covalent adduct
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
5L6I
DownloadVisualize
BU of 5l6i by Molmil
Uba1 in complex with Ub-MLN4924 covalent adduct
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
6ZHU
DownloadVisualize
BU of 6zhu by Molmil
Yeast Uba1 in complex with Ubc3 and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ubiquitin-activating enzyme E1 1, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2020-06-23
Release date:2022-01-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:ATP induced conformational changes facilitate E1-E2 disulfide bridging in the ubiquitin system
To Be Published
5L6J
DownloadVisualize
BU of 5l6j by Molmil
Uba1 in complex with Ub-MLN7243 covalent adduct
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2016-05-30
Release date:2017-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Dissecting the Specificity of Adenosyl Sulfamate Inhibitors Targeting the Ubiquitin-Activating Enzyme.
Structure, 25, 2017
6ZQH
DownloadVisualize
BU of 6zqh by Molmil
Yeast Uba1 in complex with ubiquitin
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2020-07-09
Release date:2020-11-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:Development of ADPribosyl Ubiquitin Analogues to Study Enzymes Involved in Legionella Infection.
Chemistry, 27, 2021
6YK0
DownloadVisualize
BU of 6yk0 by Molmil
Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YJZ
DownloadVisualize
BU of 6yjz by Molmil
Crystal structure of mouse pyridoxal kinase in apo form
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Pyridoxal Kinase, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YK1
DownloadVisualize
BU of 6yk1 by Molmil
Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S and artesunate
Descriptor: 1,2-ETHANEDIOL, Artesunate, GLYCEROL, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2020-04-05
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Pyridoxal kinase inhibition by artemisinins down-regulates inhibitory neurotransmission.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ZHS
DownloadVisualize
BU of 6zhs by Molmil
Uba1 bound to two E2 (Ubc13) molecules
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin-activating enzyme E1 1, ...
Authors:Misra, M, Schindelin, H.
Deposit date:2020-06-23
Release date:2022-01-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:ATP induced conformational changes facilitate E1-E2 disulfide bridging in the ubiquitin system.
To Be Published
6ZHT
DownloadVisualize
BU of 6zht by Molmil
Uba1-Ubc13 disulfide mediated complex
Descriptor: CHLORIDE ION, GLYCEROL, Ubiquitin-activating enzyme E1 1, ...
Authors:Schaefer, A, Misra, M, Schindelin, H.
Deposit date:2020-06-23
Release date:2022-01-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:ATP induced conformational changes facilitate E1-E2 disulfide bridging in the ubiquitin system.
To Be Published
3BOA
DownloadVisualize
BU of 3boa by Molmil
Crystal structure of yeast protein disulfide isomerase.
Descriptor: Protein disulfide-isomerase
Authors:Tian, G, Lennarz, W.J, Schindelin, H.
Deposit date:2007-12-17
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The Catalytic Activity of Protein-disulfide Isomerase Requires a Conformationally Flexible Molecule.
J.Biol.Chem., 283, 2008
3M63
DownloadVisualize
BU of 3m63 by Molmil
Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Dsk2
Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, Ubiquitin conjugation factor E4, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2010-03-15
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
J.Biol.Chem., 285, 2010
3M62
DownloadVisualize
BU of 3m62 by Molmil
Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23
Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, UV excision repair protein RAD23, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2010-03-15
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain.
J.Biol.Chem., 285, 2010
5YPW
DownloadVisualize
BU of 5ypw by Molmil
Crystal structure of IlvN.Val-1b
Descriptor: Acetolactate synthase isozyme 1 small subunit, VALINE
Authors:Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B.
Deposit date:2017-11-03
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases.
Biochemistry, 58, 2019
7PUX
DownloadVisualize
BU of 7pux by Molmil
Structure of p97 N-D1(L198W) in complex with Fragment TROLL2
Descriptor: (1S)-2-amino-1-(4-bromophenyl)ethan-1-ol, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Bothe, S, Schindelin, H.
Deposit date:2021-10-01
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Fragment screening using biolayer interferometry reveals ligands targeting the SHP-motif binding site of the AAA+ ATPase p97
Commun Chem, 5, 2022
3GAE
DownloadVisualize
BU of 3gae by Molmil
Crystal Structure of PUL
Descriptor: CHLORIDE ION, GLYCEROL, Protein DOA1
Authors:Zhao, G, Schindelin, H, Lennarz, W.J.
Deposit date:2009-02-17
Release date:2009-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation
Proc.Natl.Acad.Sci.USA, 106, 2009
3CMM
DownloadVisualize
BU of 3cmm by Molmil
Crystal Structure of the Uba1-Ubiquitin Complex
Descriptor: PROLINE, Ubiquitin, Ubiquitin-activating enzyme E1 1
Authors:Lee, I, Schindelin, H.
Deposit date:2008-03-23
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes.
Cell(Cambridge,Mass.), 134, 2008
5C1A
DownloadVisualize
BU of 5c1a by Molmil
p97-N750D/R753D/M757D/Q760D in complex with ATP-gamma-S
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2015-06-13
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural Basis of ATP Hydrolysis and Intersubunit Signaling in the AAA+ ATPase p97.
Structure, 24, 2016
4NNJ
DownloadVisualize
BU of 4nnj by Molmil
Crystal structure of Uba1 in complex with ubiquitin-AMP and thioesterified ubiquitin
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
Authors:Schaefer, A, Schindelin, H.
Deposit date:2013-11-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the ubiquitin-activating enzyme loaded with two ubiquitin molecules.
Acta Crystallogr.,Sect.D, 70, 2014
5YPP
DownloadVisualize
BU of 5ypp by Molmil
Crystal structure of IlvN.Val-1a
Descriptor: ACETATE ION, Acetolactate synthase isozyme 1 small subunit, DI(HYDROXYETHYL)ETHER, ...
Authors:Sarma, S.P, Bansal, A, Schindelin, H, Demeler, B.
Deposit date:2017-11-02
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases.
Biochemistry, 58, 2019
6FGC
DownloadVisualize
BU of 6fgc by Molmil
Crystal structure of Gephyrin E domain in complex with Artesunate
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2018-01-10
Release date:2019-01-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Elucidating the Molecular Basis for Inhibitory Neurotransmission Regulation by Artemisinins.
Neuron, 101, 2019
6GXY
DownloadVisualize
BU of 6gxy by Molmil
Tryparedoxin from Trypanosoma brucei in complex with CFT
Descriptor: 5-(4-fluorophenyl)-2-methyl-3~{H}-thieno[2,3-d]pyrimidin-4-one, Tryparedoxin
Authors:Bader, N, Wagner, A, Hellmich, U, Schindelin, H.
Deposit date:2018-06-27
Release date:2019-01-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Inhibitor-Induced Dimerization of an Essential Oxidoreductase from African Trypanosomes.
Angew. Chem. Int. Ed. Engl., 58, 2019
6FGD
DownloadVisualize
BU of 6fgd by Molmil
Crystal structure of Gephyrin E domain in complex with Artemether
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2018-01-10
Release date:2019-01-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Elucidating the Molecular Basis for Inhibitory Neurotransmission Regulation by Artemisinins.
Neuron, 101, 2019

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon