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PDB: 119 results

7MD5
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BU of 7md5 by Molmil
Insulin receptor ectodomain dimer complexed with two IRPA-9 partial agonists
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gomez-Llorente, Y, Zhou, H, Scapin, G.
Deposit date:2021-04-03
Release date:2022-02-23
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Functionally selective signaling and broad metabolic benefits by novel insulin receptor partial agonists.
Nat Commun, 13, 2022
7MD4
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BU of 7md4 by Molmil
Insulin receptor ectodomain dimer complexed with two IRPA-3 partial agonists
Descriptor: Insulin B chain, Insulin chain A, Isoform Short of Insulin receptor, ...
Authors:Gomez-Llorente, Y, Zhou, H, Scapin, G.
Deposit date:2021-04-03
Release date:2022-02-23
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Functionally selective signaling and broad metabolic benefits by novel insulin receptor partial agonists.
Nat Commun, 13, 2022
1HMR
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BU of 1hmr by Molmil
1.4 ANGSTROMS STRUCTURAL STUDIES ON HUMAN MUSCLE FATTY ACID BINDING PROTEIN: BINDING INTERACTIONS WITH THREE SATURATED AND UNSATURATED C18 FATTY ACIDS
Descriptor: 9-OCTADECENOIC ACID, MUSCLE FATTY ACID BINDING PROTEIN
Authors:Young, A.C.M, Scapin, G, Kromminga, A, Patel, S.B, Veerkamp, J.H, Sacchettini, J.C.
Deposit date:1994-01-02
Release date:1995-05-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies on human muscle fatty acid binding protein at 1.4 A resolution: binding interactions with three C18 fatty acids.
Structure, 2, 1994
1DRW
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ESCHERICHIA COLI DHPR/NHDH COMPLEX
Descriptor: DIHYDRODIPICOLINATE REDUCTASE, NICOTINAMIDE PURIN-6-OL-DINUCLEOTIDE
Authors:Reddy, S.G, Scapin, G, Blanchard, J.S.
Deposit date:1996-06-28
Release date:1997-01-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: thermodynamic and structural analysis of binary complexes.
Biochemistry, 35, 1996
1DRU
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BU of 1dru by Molmil
ESCHERICHIA COLI DHPR/NADH COMPLEX
Descriptor: DIHYDRODIPICOLINATE REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Reddy, S.G, Scapin, G, Blanchard, J.S.
Deposit date:1996-06-28
Release date:1997-01-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: thermodynamic and structural analysis of binary complexes.
Biochemistry, 35, 1996
1DRV
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BU of 1drv by Molmil
ESCHERICHIA COLI DHPR/ACNADH COMPLEX
Descriptor: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE, DIHYDRODIPICOLINATE REDUCTASE
Authors:Reddy, S.G, Scapin, G, Blanchard, J.S.
Deposit date:1996-06-28
Release date:1997-01-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: thermodynamic and structural analysis of binary complexes.
Biochemistry, 35, 1996
1LQF
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BU of 1lqf by Molmil
Structure of PTP1b in Complex with a Peptidic Bisphosphonate Inhibitor
Descriptor: N-BENZOYL-L-GLUTAMYL-[4-PHOSPHONO(DIFLUOROMETHYL)]-L-PHENYLALANINE-[4-PHOSPHONO(DIFLUORO-METHYL)]-L-PHENYLALANINEAMIDE, protein-tyrosine phosphatase, non-receptor type 1
Authors:Asante-Appiah, E, Patel, S, Dufresne, C, Scapin, G.
Deposit date:2002-05-10
Release date:2002-07-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of PTP-1B in complex with a peptide inhibitor reveals an alternative binding mode for bisphosphonates.
Biochemistry, 41, 2002
8VI4
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BU of 8vi4 by Molmil
TehA from Haemophilus influenzae purified in LMNG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI5
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TehA from Haemophilus influenzae purified in OG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI3
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BU of 8vi3 by Molmil
TehA from Haemophilus influenzae purified in GDN
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI2
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TehA from Haemophilus influenzae purified in DDM
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VAE
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BU of 8vae by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
8VAF
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BU of 8vaf by Molmil
Cryogenic electron microscopy structure of apo human serum albumin
Descriptor: Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
8VAC
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BU of 8vac by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with teniposide
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-(thiophen-2-ylmethylidene)-beta-D-glucopyranoside, Serum albumin
Authors:Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2023-12-11
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
2HMB
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BU of 2hmb by Molmil
THREE-DIMENSIONAL STRUCTURE OF RECOMBINANT HUMAN MUSCLE FATTY ACID-BINDING PROTEIN
Descriptor: MUSCLE FATTY ACID BINDING PROTEIN, PALMITIC ACID
Authors:Zanotti, G, Scapin, G, Spadon, P, Veerkamp, J.H, Sacchettini, J.C.
Deposit date:1992-09-11
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of recombinant human muscle fatty acid-binding protein.
J.Biol.Chem., 267, 1992
1R39
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BU of 1r39 by Molmil
THE STRUCTURE OF P38ALPHA
Descriptor: Mitogen-activated protein kinase 14, SULFATE ION
Authors:Patel, S.B, Cameron, P.M, Frantz-Wattley, B, O'Neill, E, Becker, J.W, Scapin, G.
Deposit date:2003-10-01
Release date:2004-01-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lattice stabilization and enhanced diffraction in human p38 alpha crystals by protein engineering.
Biochim.Biophys.Acta, 1696, 2004
1R3C
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BU of 1r3c by Molmil
THE STRUCTURE OF P38ALPHA C162S MUTANT
Descriptor: MAGNESIUM ION, Mitogen-activated protein kinase 14
Authors:Patel, S.B, Cameron, P.M, Frantz-Wattley, B, O'Neill, E, Becker, J.W, Scapin, G.
Deposit date:2003-10-01
Release date:2004-01-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lattice stabilization and enhanced diffraction in human p38 alpha crystals by protein engineering.
Biochim.Biophys.Acta, 1696, 2004
8UH6
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BU of 8uh6 by Molmil
Degrader-induced complex between PTPN2 and CRBN-DDB1
Descriptor: (5P)-3-(carboxymethoxy)-4-chloro-5-(3-{[(4S)-1-({3-[(4-{1-[(3R)-2,6-dioxopiperidin-3-yl]-3-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}piperidine-1-carbonyl)amino]phenyl}methanesulfonyl)-2,2-dimethylpiperidin-4-yl]amino}phenyl)thiophene-2-carboxylic acid, DNA damage-binding protein 1, Protein cereblon, ...
Authors:Catalano, C, Bratkowski, M, Scapin, G, Hao, Q.
Deposit date:2023-10-06
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanistic insights into a heterobifunctional degrader-induced PTPN2/N1 complex.
Commun Chem, 7, 2024
7LEZ
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BU of 7lez by Molmil
Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:2 mAb1 complex
Descriptor: Arginase-1, MANGANESE (II) ION, mAb1 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.15 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LEX
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BU of 7lex by Molmil
Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:3 mAb1 complex
Descriptor: Arginase-1, mAb1 heavy chain, mAb1 light chain
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF0
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BU of 7lf0 by Molmil
Trimeric human Arginase 1 in complex with mAb2
Descriptor: Arginase-1, mAb2 heavy chain, mAb2 light chain
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LEY
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BU of 7ley by Molmil
Trimeric human Arginase 1 in complex with mAb5
Descriptor: Arginase-1, MANGANESE (II) ION, mAb5 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF2
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BU of 7lf2 by Molmil
Trimeric human Arginase 1 in complex with mAb4
Descriptor: Arginase-1, MANGANESE (II) ION, mAb4 monoclonal antibody heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
7LF1
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BU of 7lf1 by Molmil
Trimeric human Arginase 1 in complex with mAb3
Descriptor: Arginase-1, MANGANESE (II) ION, mAb3 heavy chain, ...
Authors:Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:2021-01-15
Release date:2021-09-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action.
Commun Biol, 4, 2021
1B9H
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BU of 1b9h by Molmil
CRYSTAL STRUCTURE OF 3-AMINO-5-HYDROXYBENZOIC ACID (AHBA) SYNTHASE
Descriptor: PROTEIN (3-AMINO-5-HYDROXYBENZOIC ACID SYNTHASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Eads, J.C, Beeby, M, Scapin, G, Yu, T.-W, Floss, H.G.
Deposit date:1999-02-11
Release date:1999-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of 3-amino-5-hydroxybenzoic acid (AHBA) synthase.
Biochemistry, 38, 1999

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