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PDB: 611 results

8G3K
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Cryo-EM imaging scaffold subunits A and B used to display KRAS G12C complex with GDP
Descriptor: Cob_adeno_trans domain-containing protein, Cryo-EM imaging scaffold subunit B with DARPin - RCG-33
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-08
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G47
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KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
Descriptor: AMG 510 (bound form), GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-08
Release date:2023-08-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4E
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Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
Descriptor: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-09
Release date:2023-08-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4H
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BU of 8g4h by Molmil
KRAS G13C complex with GDP imaged on a cryo-EM imaging scaffold
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-09
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G42
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BU of 8g42 by Molmil
KRAS G12C complex with GDP imaged on a cryo-EM imaging scaffold
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-08
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G4F
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KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-09
Release date:2023-08-09
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G2V
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BU of 8g2v by Molmil
Cryo-EM structure of recombinant human LECT2 amyloid fibril core
Descriptor: Leukocyte cell-derived chemotaxin-2
Authors:Richards, L.S, Flores, M.D, Zink, S, Schibrowsky, N.A, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2023-02-06
Release date:2023-08-16
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.715 Å)
Cite:Cryo-EM structure of a human LECT2 amyloid fibril reveals a network of polar ladders at its core.
Structure, 31, 2023
4IQ4
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Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains, triple mutant, P21212 form
Descriptor: Non-haem bromoperoxidase BPO-A2, Matrix protein 1
Authors:Lai, Y.-T, Sawaya, M.R, Yeates, T.O.
Deposit date:2013-01-10
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.495 Å)
Cite:Structure and flexibility of nanoscale protein cages designed by symmetric self-assembly.
J.Am.Chem.Soc., 135, 2013
4ITV
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Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains, triple mutant, P212121 form
Descriptor: Non-haem bromoperoxidase BPO-A2, Matrix protein 1
Authors:Lai, Y.-T, Sawaya, M.R, Yeates, T.O.
Deposit date:2013-01-18
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.598 Å)
Cite:Structure and flexibility of nanoscale protein cages designed by symmetric self-assembly.
J.Am.Chem.Soc., 135, 2013
4K2X
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BU of 4k2x by Molmil
OxyS anhydrotetracycline hydroxylase from Streptomyces rimosus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Polyketide oxygenase/hydroxylase
Authors:Wang, P, Sawaya, M.R, Tang, Y.
Deposit date:2013-04-09
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Uncovering the Enzymes that Catalyze the Final Steps in Oxytetracycline Biosynthesis.
J.Am.Chem.Soc., 135, 2013
4LCL
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BU of 4lcl by Molmil
Simvastatin Synthase (LOVD), from Aspergillus Terreus, LovD6 mutant (simh6208)
Descriptor: ISOPROPYL ALCOHOL, Transesterase
Authors:Gao, X, Sawaya, M.R, Yeates, T.O, Tang, Y.
Deposit date:2013-06-21
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of distant mutations and allosteric regulation on LovD active site dynamics.
Nat.Chem.Biol., 10, 2014
4LCM
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BU of 4lcm by Molmil
Simvastatin Synthase (LOVD), from Aspergillus Terreus, LovD9 mutant (simh9014)
Descriptor: Transesterase
Authors:Gao, X, Sawaya, M.R, Yeates, T.O, Tang, Y.
Deposit date:2013-06-21
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:The role of distant mutations and allosteric regulation on LovD active site dynamics.
Nat.Chem.Biol., 10, 2014
4LFD
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BU of 4lfd by Molmil
Staphylococcus aureus sortase B-substrate complex
Descriptor: (CBZ)NPQ(B27) PEPTIDE, SULFATE ION, Sortase B
Authors:Jacobitz, A.W, Sawaya, M.R, Yi, S.W, Amer, B.R, Huang, G.L, Nguyen, A.V, Jung, M.E, Clubb, R.T.
Deposit date:2013-06-26
Release date:2014-02-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural and Computational Studies of the Staphylococcus aureus Sortase B-Substrate Complex Reveal a Substrate-stabilized Oxyanion Hole.
J.Biol.Chem., 289, 2014
1KR5
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BU of 1kr5 by Molmil
Crystal structure of human L-isoaspartyl methyltransferase
Descriptor: Protein-L-isoaspartate O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Ryttersgaard, C, Griffith, S.C, Sawaya, M.R, MacLaren, D.C, Clarke, S, Yeates, T.O.
Deposit date:2002-01-08
Release date:2002-02-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human L-isoaspartyl methyltransferase.
J.Biol.Chem., 277, 2002
1LMI
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BU of 1lmi by Molmil
1.5 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A SECRETED PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS-MPT63
Descriptor: Immunogenic protein MPT63/MPB63
Authors:Goulding, C.W, Parseghian, A, Sawaya, M.R, Cascio, D, Apostol, M, Gennaro, M.L, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2002-05-01
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a major secreted protein of Mycobacterium tuberculosis-MPT63 at 1.5-A resolution
Protein Sci., 11, 2002
1MZ4
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BU of 1mz4 by Molmil
Crystal Structure of Cytochrome c550 from Thermosynechococcus elongatus
Descriptor: BICARBONATE ION, GLYCEROL, HEME C, ...
Authors:Kerfeld, C.A, Sawaya, M.R, Bottin, H, Tran, K.T, Sugiura, M, Kirilovsky, D, Krogmann, D, Yeates, T.O, Boussac, A.
Deposit date:2002-10-05
Release date:2003-09-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and EPR characterization of the soluble form of cytochrome c-550 and of the psbV2 gene product from the cyanobacterium Thermosynechococcus elongatus.
Plant Cell.Physiol., 44, 2003
1I8F
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BU of 1i8f by Molmil
THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE
Descriptor: GLYCEROL, PUTATIVE SNRNP SM-LIKE PROTEIN
Authors:Mura, C, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2001-03-14
Release date:2001-05-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core.
Proc.Natl.Acad.Sci.USA, 98, 2001
1L9L
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BU of 1l9l by Molmil
GRANULYSIN FROM HUMAN CYTOLYTIC T LYMPHOCYTES
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ETHANOL, Granulysin, ...
Authors:Anderson, D.H, Sawaya, M.R, Cascio, D, Ernst, W, Krensky, A, Modlin, R, Eisenberg, D.
Deposit date:2002-03-25
Release date:2002-11-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Granulysin Crystal Structure and a Structure-Derived Lytic Mechanism
J.Mol.Biol., 325, 2002
1L6P
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BU of 1l6p by Molmil
N-terminal of DsbD (residues 20-144) from E. coli.
Descriptor: Thiol:disulfide interchange protein dsbD
Authors:Goulding, C.W, Sawaya, M.R, Parseghian, A.
Deposit date:2002-03-12
Release date:2002-06-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Thiol-disulfide exchange in an immunoglobulin-like fold: structure of the N-terminal domain of DsbD.
Biochemistry, 41, 2002
1JG1
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BU of 1jg1 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-ADENOSYL-L-HOMOCYSTEINE
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, protein-L-isoaspartate O-methyltransferase
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1JG4
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Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine
Descriptor: S-ADENOSYLMETHIONINE, protein-L-isoaspartate O-methyltransferase
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1K26
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BU of 1k26 by Molmil
Structure of a Nudix Protein from Pyrobaculum aerophilum Solved by the Single Wavelength Anomolous Scattering Method
Descriptor: ACETIC ACID, GLYCEROL, IRIDIUM (III) ION, ...
Authors:Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2001-09-26
Release date:2002-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
Acta Crystallogr.,Sect.D, 58, 2002
1NBU
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7,8-Dihydroneopterin Aldolase Complexed with Product From Mycobacterium Tuberculosis
Descriptor: 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, Probable dihydroneopterin aldolase
Authors:Goulding, C.W, Apostol, M.I, Sawaya, M.R, Phillips, M, Parseghian, A, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2002-12-03
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Regulation by oligomerization in a mycobacterial folate biosynthetic enzyme.
J.Mol.Biol., 349, 2005
1JG3
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BU of 1jg3 by Molmil
Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine & VYP(ISP)HA substrate
Descriptor: ADENOSINE, CHLORIDE ION, SODIUM ION, ...
Authors:Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
Deposit date:2001-06-22
Release date:2001-11-16
Last modified:2011-07-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1K2E
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BU of 1k2e by Molmil
crystal structure of a nudix protein from Pyrobaculum aerophilum
Descriptor: ACETIC ACID, GLYCEROL, NICKEL (II) ION, ...
Authors:Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2001-09-26
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
Acta Crystallogr.,Sect.D, 58, 2002

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数据于2024-11-06公开中

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