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PDB: 2585 results

8EMQ
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BU of 8emq by Molmil
Mouse apoferritin heavy chain with zinc determined using single-particle cryo-EM with Apollo camera.
Descriptor: FE (III) ION, Ferritin heavy chain, N-terminally processed, ...
Authors:Peng, R, Fu, X, Mendez, J.H, Randolph, P.H, Bammes, B, Stagg, S.M.
Deposit date:2022-09-28
Release date:2022-12-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (1.66 Å)
Cite:Characterizing the resolution and throughput of the Apollo direct electron detector.
J Struct Biol X, 7, 2023
8EN7
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BU of 8en7 by Molmil
Mouse apoferritin heavy chain without zinc determined using single-particle cryo-EM with Apollo camera.
Descriptor: FE (III) ION, Ferritin heavy chain, N-terminally processed
Authors:Peng, R, Fu, X, Mendez, J.H, Randolph, P.H, Bammes, B, Stagg, S.M.
Deposit date:2022-09-28
Release date:2022-12-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (1.68 Å)
Cite:Characterizing the resolution and throughput of the Apollo direct electron detector.
J Struct Biol X, 7, 2023
5C1M
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BU of 5c1m by Molmil
Crystal structure of active mu-opioid receptor bound to the agonist BU72
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3S,3aR,5aR,6R,11bR,11cS)-3a-methoxy-3,14-dimethyl-2-phenyl-2,3,3a,6,7,11c-hexahydro-1H-6,11b-(epiminoethano)-3,5a-methanonaphtho[2,1-g]indol-10-ol, CHOLESTEROL, ...
Authors:Huang, W.J, Manglik, A, Venkatakrishnan, A.J, Laeremans, T, Feinberg, E.N, Sanborn, A.L, Kato, H.E, Livingston, K.E, Thorsen, T.S, Kling, R, Granier, S, Gmeiner, P, Husbands, S.M, Traynor, J.R, Weis, W.I, Steyaert, J, Dror, R.O, Kobilka, B.K.
Deposit date:2015-06-15
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural insights into mu-opioid receptor activation.
Nature, 524, 2015
1TP8
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BU of 1tp8 by Molmil
CRYSTAL STRUCTURE OF A GALACTOSE SPECIFIC LECTIN FROM ARTOCARPUS HIRSUTA IN COMPLEX WITH METHYL-a-D-GALACTOSE
Descriptor: AGGLUTININ ALPHA CHAIN, AGGLUTININ BETA CHAIN, methyl alpha-D-galactopyranoside
Authors:Rao, K.N, Suresh, C.G, Katre, U.V, Gaikwad, S.M, Khan, M.I.
Deposit date:2004-06-16
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Two orthorhombic crystal structures of a galactose-specific lectin from Artocarpus hirsuta in complex with methyl-alpha-D-galactose.
Acta Crystallogr.,Sect.D, 60, 2004
8BZS
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BU of 8bzs by Molmil
The crystal structure of glycogen phosphorylase in complex with baicalein
Descriptor: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one, Glycogen phosphorylase, muscle form, ...
Authors:Koulas, S.M, Mathomes, R, Hayes, J.M, Leonidas, D.D.
Deposit date:2022-12-15
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Multidisciplinary docking, kinetics and X-ray crystallography studies of baicalein acting as a glycogen phosphorylase inhibitor and determination of its' potential against glioblastoma in cellular models.
Chem.Biol.Interact., 382, 2023
1K88
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BU of 1k88 by Molmil
Crystal structure of procaspase-7
Descriptor: procaspase-7
Authors:Chai, J, Wu, Q, Shiozaki, E, Srinivasa, S.M, Alnemri, E.S, Shi, Y.
Deposit date:2001-10-23
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding
Cell(Cambridge,Mass.), 107, 2001
1TVG
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BU of 1tvg by Molmil
X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958.
Descriptor: CALCIUM ION, LOC51668 protein, SAMARIUM (III) ION
Authors:Kuzin, A.P, Vorobiev, S.M, Lee, I, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-06-29
Release date:2004-11-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study.
Proteins, 75, 2009
6U3V
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BU of 6u3v by Molmil
Crystal structure of human alpha/epsilon-COP of the COPI vesicular coat bound to alpha-COP STM1
Descriptor: Coatomer subunit alpha, Coatomer subunit epsilon
Authors:Travis, S.M, Hughson, F.M.
Deposit date:2019-08-22
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Roles of singleton tryptophan motifs in COPI coat stability and vesicle tethering.
Proc.Natl.Acad.Sci.USA, 116, 2019
3KTU
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BU of 3ktu by Molmil
Structure of human 8-oxoGuanine Glycosylase 1 bound to fluorninated oxoG-containing DNA
Descriptor: CALCIUM ION, DNA (5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*AP*(FDG)P*GP*TP*CP*TP*AP*C)-3'), ...
Authors:Verdine, G.L, Lee, S.M.
Deposit date:2009-11-26
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural investigation of hOGG1 bound to a fluorinated oxoG analog
to be published
3EXZ
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BU of 3exz by Molmil
Crystal structure of the MaoC-like dehydratase from Rhodospirillum rubrum. Northeast Structural Genomics Consortium target RrR103a.
Descriptor: MaoC-like dehydratase
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Wang, H, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-10-17
Release date:2008-10-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the MaoC-like dehydratase from Rhodospirillum rubrum.
To be Published
3OGG
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BU of 3ogg by Molmil
Crystal structure of the receptor binding domain of botulinum neurotoxin D
Descriptor: Botulinum neurotoxin type D
Authors:Zhang, Y, Gao, X, Qin, L, Buchko, G.W, Robinson, H, Varnum, S.M.
Deposit date:2010-08-16
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Structural analysis of the receptor binding domain of botulinum neurotoxin serotype D.
Biochem.Biophys.Res.Commun., 401, 2010
6LNN
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BU of 6lnn by Molmil
Crystal structure of MERS-CoV N-NTD complexed with ligand P4-1
Descriptor: 5-propoxy-1H-indole, Nucleoprotein
Authors:Hou, M.H, Lin, S.M, Hsu, J.N.
Deposit date:2019-12-31
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.634 Å)
Cite:Targeting the N-Terminus Domain of the Coronavirus Nucleocapsid Protein Induces Abnormal Oligomerization via Allosteric Modulation.
Front Mol Biosci, 9, 2022
6LNU
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BU of 6lnu by Molmil
Cryo-EM structure of immature Zika virus
Descriptor: Genome polyprotein
Authors:Tan, T.Y, Fibriansah, G, Kostyuchenko, V.A, Ng, T.S, Lim, X.X, Lim, X.N, Shi, J, Morais, M.C, Corti, D, Lok, S.M.
Deposit date:2020-01-02
Release date:2020-02-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Capsid protein structure in Zika virus reveals the flavivirus assembly process.
Nat Commun, 11, 2020
3FB2
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BU of 3fb2 by Molmil
Crystal structure of the human brain alpha spectrin repeats 15 and 16. Northeast Structural Genomics Consortium target HR5563a.
Descriptor: Spectrin alpha chain, brain spectrin
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Shastry, R, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-11-18
Release date:2008-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the human brain alpha spectrin repeats 15 and 16.
To be Published
1KCX
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BU of 1kcx by Molmil
X-ray structure of NYSGRC target T-45
Descriptor: DIHYDROPYRIMIDINASE RELATED PROTEIN-1
Authors:Deo, R.C, Schmidt, E.F, Strittmatter, S.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-11-11
Release date:2003-08-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural bases for CRMP function in plexin-dependent semaphorin3A signaling
Embo J., 23, 2004
3KSF
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BU of 3ksf by Molmil
structure of fRMsr of Staphylococcus aureus (reduced form)
Descriptor: DI(HYDROXYETHYL)ETHER, Putative uncharacterized protein
Authors:Bong, S.M, Chi, Y.M.
Deposit date:2009-11-23
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:structure of fRMsr of Staphylococcus aureus
To be Published
1KEF
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BU of 1kef by Molmil
PDZ1 of SAP90
Descriptor: synapse associated protein-90
Authors:Piserchio, A, Pellegrini, M, Mehta, S, Blackman, S.M, Garcia, E.P, Marshall, J, Mierke, D.F.
Deposit date:2001-11-15
Release date:2002-03-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The PDZ1 domain of SAP90. Characterization of structure and binding.
J.Biol.Chem., 277, 2002
3KSI
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BU of 3ksi by Molmil
structure of fRMsr of Staphylococcus aureus (complex with 2-propanol)
Descriptor: ISOPROPYL ALCOHOL, Putative uncharacterized protein, SULFATE ION
Authors:Bong, S.M, Chi, Y.M.
Deposit date:2009-11-23
Release date:2010-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:structure of fRMsr of Staphylococcus aureus
To be Published
5YN8
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BU of 5yn8 by Molmil
Crystal structure of MERS-CoV nsp16/nsp10 complex bound to SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, nsp10 protein, ...
Authors:Wei, S.M, Yang, L, Ke, Z.H, Chen, Y, Guo, D.Y, Fan, C.P.
Deposit date:2017-10-24
Release date:2018-12-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
To Be Published
5YNJ
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BU of 5ynj by Molmil
Crystal structure of MERS-CoV nsp16/nsp10 complex bound to m7GpppG
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, ZINC ION, nsp10 protein, ...
Authors:Wei, S.M, Yang, L, Ke, Z.H, Chen, Y, Guo, D.Y, Fan, C.P.
Deposit date:2017-10-24
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
To Be Published
5YNO
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BU of 5yno by Molmil
Crystal structure of MERS-CoV nsp16/nsp10 complex bound to SAH and m7GpppA
Descriptor: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, ...
Authors:Wei, S.M, Yang, L, Ke, Z.H, Guo, D.Y, Fan, C.P.
Deposit date:2017-10-24
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
To Be Published
4XNN
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BU of 4xnn by Molmil
Crystal Structure of a GH7 Family Cellobiohydrolase from Daphnia pulex
Descriptor: Cellobiohydrolase CHBI, GLYCEROL
Authors:Ebrahim, A, Hobdey, S.E, Podkaminer, K, Taylor II, L.E, Beckham, G.T, Decker, S.R, Himmel, M.E, Cragg, S.M, McGeehan, J.E.
Deposit date:2015-01-15
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a GH7 Family Cellobiohydrolase from Daphnia pulex
To Be Published
3KSG
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BU of 3ksg by Molmil
structure of fRMsr of Staphylococcus aureus (complex with substrate)
Descriptor: METHIONINE SULFOXIDE, Putative uncharacterized protein
Authors:Bong, S.M, Chi, Y.M.
Deposit date:2009-11-23
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of fRMsr of Staphylococcus aureus
To be published
4XDN
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BU of 4xdn by Molmil
Crystal structure of Scc4 in complex with Scc2n
Descriptor: MAU2 chromatid cohesion factor homolog, SULFATE ION, Sister chromatid cohesion protein 2
Authors:Hinshaw, S.M, Harrison, S.C.
Deposit date:2014-12-19
Release date:2015-06-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural evidence for Scc4-dependent localization of cohesin loading.
Elife, 4, 2015
8F4J
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BU of 8f4j by Molmil
RT XFEL structure of Photosystem II 4000 microseconds after the third illumination at 2.00 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K.
Deposit date:2022-11-10
Release date:2023-03-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural evidence for intermediates during O 2 formation in photosystem II.
Nature, 617, 2023

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數據於2024-11-06公開中

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