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PDB: 140 件

5MWI
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Crystal structure of G(CUG)8G duplex
分子名称: RNA G(CUG)8C duplex, SULFATE ION
著者Kiliszek, A, Blaszczyk, L, Rypniewski, W.
登録日2017-01-18
公開日2017-03-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Stabilization of RNA hairpins using non-nucleotide linkers and circularization.
Nucleic Acids Res., 45, 2017
4W5Z
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BU of 4w5z by Molmil
High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2014-08-19
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina.
To Be Published
4XW0
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BU of 4xw0 by Molmil
Crystal structure of (GCCU(G-LNA)CCUGC)2 duplex
分子名称: RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*GP*C)-3'), SULFATE ION
著者Kiliszek, A, Banaszak, K, Rypniewski, W.
登録日2015-01-28
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
4XW1
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Crystal structure of (GCCU(G-LNA)CCUG)2 duplex
分子名称: RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*G)-3')
著者Kiliszek, A, Banaszak, K, Rypniewski, W.
登録日2015-01-28
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
2UBP
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BU of 2ubp by Molmil
STRUCTURE OF NATIVE UREASE FROM BACILLUS PASTEURII
分子名称: NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), PROTEIN (UREASE BETA SUBUNIT), ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
登録日1998-11-04
公開日1999-11-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
1C75
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0.97 A "AB INITIO" CRYSTAL STRUCTURE OF CYTOCHROME C-553 FROM BACILLUS PASTEURII
分子名称: CYTOCHROME C-553, HEME C
著者Benini, S, Ciurli, S, Rypniewski, W.R, Wilson, K.S.
登録日2000-02-09
公開日2000-03-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
3D7W
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BU of 3d7w by Molmil
Mistletoe Lectin I in Complex with Zeatin
分子名称: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Meyer, A, Rypniewski, W, Szymanski, M, Voelter, W, Barciszewski, J, Betzel, C.
登録日2008-05-22
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of mistletoe lectin I from Viscum album in complex with the phytohormone zeatin
Biochim.Biophys.Acta, 1784, 2008
3GM7
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1.58 A resolution X-ray structure of (CUG)6
分子名称: 5'-R(*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'
著者Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
登録日2009-03-13
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophy.
Nucleic Acids Res., 37, 2009
3GLP
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1.23 A resolution X-ray structure of (GCUGCUGC)2
分子名称: 5'-R(*GP*CP*UP*GP*CP*UP*GP*C)-3', GLYCEROL, SULFATE ION
著者Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
登録日2009-03-12
公開日2009-05-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophy.
Nucleic Acids Res., 37, 2009
1B7V
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BU of 1b7v by Molmil
Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution
分子名称: HEME C, PROTEIN (CYTOCHROME C-553)
著者Gonzalez, A, Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S.
登録日1999-01-22
公開日2000-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
1I7J
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BU of 1i7j by Molmil
CRYSTAL STRUCTURE OF 2'-O-ME(CGCGCG)2: AN RNA DUPLEX AT 1.19 A RESOLUTION. 2-METHYL-2,4-PENTANEDIOL AND MAGNESIUM BINDING.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-R(*(OMC)P*(OMG)P*(OMC)P*(OMG)P*(OMC)P*(OMG))-3', MAGNESIUM ION
著者Adamiak, D.A, Rypniewski, W.R, Milecki, J, Adamiak, R.W.
登録日2001-03-09
公開日2001-09-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献The 1.19 A X-ray structure of 2'-O-Me(CGCGCG)(2) duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove.
Nucleic Acids Res., 29, 2001
1Z24
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BU of 1z24 by Molmil
The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
分子名称: BILIVERDIN IX GAMMA CHROMOPHORE, Insecticyanin A form
著者Holden, H.M, Rypniewski, W.R, Law, J.H, Rayment, I.
登録日2005-03-07
公開日2005-04-05
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
Embo J., 6, 1987
2PUW
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BU of 2puw by Molmil
The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans
分子名称: 6-O-phosphono-beta-D-glucopyranose, CHLORIDE ION, isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing)
著者Raczynska, J, Olchowy, J, Milewski, S, Rypniewski, W.
登録日2007-05-09
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.151 Å)
主引用文献The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
6QIS
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BU of 6qis by Molmil
Crystal structure of CAG repeats with synthetic CMBL3a compound (model II)
分子名称: CMBL3a, RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3'), SULFATE ION
著者Kiliszek, A, Blaszczyk, L, Rypniewski, W, Nakatani, K.
登録日2019-01-21
公開日2019-09-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural insights into synthetic ligands targeting A-A pairs in disease-related CAG RNA repeats.
Nucleic Acids Res., 47, 2019
4EB4
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BU of 4eb4 by Molmil
Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Dowiercial, A, Jarmula, A, Rypniewski, W.R, Wilk, P, Rode, W.
登録日2012-03-23
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of mouse thymidylate synthase in tertiary complex with dUMP and raltitrexed reveals N-terminus architecture and two different active site conformations.
Biomed Res Int, 2014, 2014
3IHI
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BU of 3ihi by Molmil
Crystal structure of mouse thymidylate synthase
分子名称: SULFATE ION, Thymidylate synthase
著者Dowiercial, A, Jarmula, A, Rypniewski, W.R, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
登録日2009-07-30
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
5EMG
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BU of 5emg by Molmil
Crystal structures of PNA p(GCTGCTGC)2 duplex containing T-T mismatches
分子名称: CHLORIDE ION, GPN-CPN-TPN-GPN-CPN-TPN-GPN-CPN, SODIUM ION
著者Kiliszek, A, Banaszak, K, Dauter, Z, Rypniewski, W.
登録日2015-11-06
公開日2016-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献The first crystal structures of RNA-PNA duplexes and a PNA-PNA duplex containing mismatches-toward anti-sense therapy against TREDs.
Nucleic Acids Res., 44, 2016
6HND
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BU of 6hnd by Molmil
Crystal structure of the aromatic aminotransferase Aro9 from C. Albicans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Aromatic-amino-acid:2-oxoglutarate transaminase, POTASSIUM ION, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-14
公開日2019-02-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
6HNV
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Crystal structure of aminotransferase Aro9 from C. Albicans with ligands
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINOHEXANEDIOIC ACID, 2-OXOADIPIC ACID, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-17
公開日2019-02-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
4E5O
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BU of 4e5o by Molmil
Crystal structure of mouse thymidylate synthase in complex with dUMP
分子名称: 1,4-BUTANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
著者Dowiercial, A, Jarmula, A, Rypniewski, W, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
登録日2012-03-14
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
2PUV
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The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans
分子名称: 5-AMINO-5-DEOXY-1-O-PHOSPHONO-D-MANNITOL, ACETATE ION, SODIUM ION, ...
著者Raczynska, J, Olchowy, J, Milewski, S, Rypniewski, W.
登録日2007-05-09
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
2PUT
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BU of 2put by Molmil
The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans
分子名称: ACETATE ION, FRUCTOSE -6-PHOSPHATE, SODIUM ION, ...
著者Raczynska, J, Olchowy, J, Milewski, S, Rypniewski, W.
登録日2007-05-09
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
1S3T
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BU of 1s3t by Molmil
BORATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE
分子名称: BORIC ACID, NICKEL (II) ION, SULFATE ION, ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
登録日2004-01-14
公開日2004-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular Details of Urease Inhibition by Boric Acid: Insights into the Catalytic Mechanism.
J.Am.Chem.Soc., 126, 2004
8AMG
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Crystal structure of AUGUGGCAU duplex with barium ions (model 1)
分子名称: BARIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
著者Kiliszek, A, Rypniewski, W.
登録日2022-08-03
公開日2022-11-23
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022
8AMM
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Crystal structure of AUGUGGCAU duplex with cesium ions
分子名称: CESIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
著者Kiliszek, A, Rypniewski, W.
登録日2022-08-03
公開日2022-11-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022

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