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PDB: 140 件

4XW0
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Crystal structure of (GCCU(G-LNA)CCUGC)2 duplex
分子名称: RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*GP*C)-3'), SULFATE ION
著者Kiliszek, A, Banaszak, K, Rypniewski, W.
登録日2015-01-28
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
4XW1
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Crystal structure of (GCCU(G-LNA)CCUG)2 duplex
分子名称: RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*G)-3')
著者Kiliszek, A, Banaszak, K, Rypniewski, W.
登録日2015-01-28
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
1B7V
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BU of 1b7v by Molmil
Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution
分子名称: HEME C, PROTEIN (CYTOCHROME C-553)
著者Gonzalez, A, Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S.
登録日1999-01-22
公開日2000-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
3UBP
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BU of 3ubp by Molmil
DIAMIDOPHOSPHATE INHIBITED BACILLUS PASTEURII UREASE
分子名称: DIAMIDOPHOSPHATE, NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Miletti, S, Mangani, S, Ciurli, S.
登録日1998-12-16
公開日1999-12-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
3IHI
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Crystal structure of mouse thymidylate synthase
分子名称: SULFATE ION, Thymidylate synthase
著者Dowiercial, A, Jarmula, A, Rypniewski, W.R, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
登録日2009-07-30
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
2UBP
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BU of 2ubp by Molmil
STRUCTURE OF NATIVE UREASE FROM BACILLUS PASTEURII
分子名称: NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), PROTEIN (UREASE BETA SUBUNIT), ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
登録日1998-11-04
公開日1999-11-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
1IE7
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BU of 1ie7 by Molmil
PHOSPHATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE
分子名称: NICKEL (II) ION, PHOSPHATE ION, UREASE ALPHA SUBUNIT, ...
著者Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
登録日2001-04-09
公開日2001-04-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-based rationalization of urease inhibition by phosphate: novel insights into the enzyme mechanism.
J.Biol.Inorg.Chem., 6, 2001
3D7W
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BU of 3d7w by Molmil
Mistletoe Lectin I in Complex with Zeatin
分子名称: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Meyer, A, Rypniewski, W, Szymanski, M, Voelter, W, Barciszewski, J, Betzel, C.
登録日2008-05-22
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of mistletoe lectin I from Viscum album in complex with the phytohormone zeatin
Biochim.Biophys.Acta, 1784, 2008
3GM7
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1.58 A resolution X-ray structure of (CUG)6
分子名称: 5'-R(*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'
著者Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
登録日2009-03-13
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophy.
Nucleic Acids Res., 37, 2009
4MB4
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BU of 4mb4 by Molmil
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 60, GLYCEROL, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2013-08-19
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
4MB5
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BU of 4mb5 by Molmil
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase 60, DI(HYDROXYETHYL)ETHER, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2013-08-19
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.639 Å)
主引用文献Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
4MB3
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BU of 4mb3 by Molmil
Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella marina
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Chitinase 60, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2013-08-19
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
1Z24
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BU of 1z24 by Molmil
The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
分子名称: BILIVERDIN IX GAMMA CHROMOPHORE, Insecticyanin A form
著者Holden, H.M, Rypniewski, W.R, Law, J.H, Rayment, I.
登録日2005-03-07
公開日2005-04-05
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution.
Embo J., 6, 1987
6QIS
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BU of 6qis by Molmil
Crystal structure of CAG repeats with synthetic CMBL3a compound (model II)
分子名称: CMBL3a, RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3'), SULFATE ION
著者Kiliszek, A, Blaszczyk, L, Rypniewski, W, Nakatani, K.
登録日2019-01-21
公開日2019-09-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural insights into synthetic ligands targeting A-A pairs in disease-related CAG RNA repeats.
Nucleic Acids Res., 47, 2019
6HND
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BU of 6hnd by Molmil
Crystal structure of the aromatic aminotransferase Aro9 from C. Albicans
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Aromatic-amino-acid:2-oxoglutarate transaminase, POTASSIUM ION, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-14
公開日2019-02-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
6HNV
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BU of 6hnv by Molmil
Crystal structure of aminotransferase Aro9 from C. Albicans with ligands
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINOHEXANEDIOIC ACID, 2-OXOADIPIC ACID, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-17
公開日2019-02-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
4EB4
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BU of 4eb4 by Molmil
Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Dowiercial, A, Jarmula, A, Rypniewski, W.R, Wilk, P, Rode, W.
登録日2012-03-23
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of mouse thymidylate synthase in tertiary complex with dUMP and raltitrexed reveals N-terminus architecture and two different active site conformations.
Biomed Res Int, 2014, 2014
3TJA
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BU of 3tja by Molmil
Crystal structure of Helicobacter pylori UreE in the apo form
分子名称: CHLORIDE ION, SULFATE ION, Urease accessory protein ureE
著者Banaszak, K, Bellucci, M, Zambelli, B, Rypniewski, W.R, Ciurli, S.
登録日2011-08-24
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and X-ray absorption spectroscopic characterization of Helicobacter pylori UreE bound to Ni2+ and Zn2+ reveals a role for the disordered C-terminal arm in metal trafficking.
Biochem.J., 441, 2012
3TJ9
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BU of 3tj9 by Molmil
Crystal structure of Helicobacter pylori UreE bound to Zn2+
分子名称: FORMIC ACID, Urease accessory protein ureE, ZINC ION
著者Banaszak, K, Bellucci, M, Zambelli, B, Rypniewski, W.R, Ciurli, S.
登録日2011-08-24
公開日2011-11-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.521 Å)
主引用文献Crystallographic and X-ray absorption spectroscopic characterization of Helicobacter pylori UreE bound to Ni2+ and Zn2+ reveals a role for the disordered C-terminal arm in metal trafficking.
Biochem.J., 441, 2012
3TJ8
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BU of 3tj8 by Molmil
Crystal structure of Helicobacter pylori UreE bound to Ni2+
分子名称: FORMIC ACID, NICKEL (II) ION, Urease accessory protein ureE
著者Banaszak, K, Bellucci, M, Zambelli, B, Rypniewski, W.R, Ciurli, S.
登録日2011-08-24
公開日2011-11-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献Crystallographic and X-ray absorption spectroscopic characterization of Helicobacter pylori UreE bound to Ni2+ and Zn2+ reveals a role for the disordered C-terminal arm in metal trafficking.
Biochem.J., 441, 2012
2PUW
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BU of 2puw by Molmil
The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans
分子名称: 6-O-phosphono-beta-D-glucopyranose, CHLORIDE ION, isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing)
著者Raczynska, J, Olchowy, J, Milewski, S, Rypniewski, W.
登録日2007-05-09
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.151 Å)
主引用文献The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
4E5O
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BU of 4e5o by Molmil
Crystal structure of mouse thymidylate synthase in complex with dUMP
分子名称: 1,4-BUTANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
著者Dowiercial, A, Jarmula, A, Rypniewski, W, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
登録日2012-03-14
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
132L
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BU of 132l by Molmil
STRUCTURAL CONSEQUENCES OF REDUCTIVE METHYLATION OF LYSINE RESIDUES IN HEN EGG WHITE LYSOZYME: AN X-RAY ANALYSIS AT 1.8 ANGSTROMS RESOLUTION
分子名称: HEN EGG WHITE LYSOZYME
著者Rayment, I, Rypniewski, W.R, Holden, H.M.
登録日1993-06-02
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural consequences of reductive methylation of lysine residues in hen egg white lysozyme: an X-ray analysis at 1.8-A resolution.
Biochemistry, 32, 1993
5EMG
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BU of 5emg by Molmil
Crystal structures of PNA p(GCTGCTGC)2 duplex containing T-T mismatches
分子名称: CHLORIDE ION, GPN-CPN-TPN-GPN-CPN-TPN-GPN-CPN, SODIUM ION
著者Kiliszek, A, Banaszak, K, Dauter, Z, Rypniewski, W.
登録日2015-11-06
公開日2016-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献The first crystal structures of RNA-PNA duplexes and a PNA-PNA duplex containing mismatches-toward anti-sense therapy against TREDs.
Nucleic Acids Res., 44, 2016
6HNU
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Crystal structure of the aminotransferase Aro8 from C. Albicans with ligands
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aromatic amino acid aminotransferase I, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-17
公開日2019-02-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019

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