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PDB: 67 results

6GDX
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BU of 6gdx by Molmil
Structure of CutA from Synechococcus elongatus PCC7942 complexed with 3 molecules of Bis-Tris
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
6GDU
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BU of 6gdu by Molmil
Structure of CutA from Synechococcus elongatus PCC7942
Descriptor: Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
3GL9
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BU of 3gl9 by Molmil
The structure of a histidine kinase-response regulator complex sheds light into two-component signaling and reveals a novel cis autophosphorylation mechanism
Descriptor: MAGNESIUM ION, Response regulator, SULFATE ION
Authors:Casino, P, Rubio, V, Marina, A.
Deposit date:2009-03-11
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight into Partner Specificity and Phosphoryl Transfer in Two-Component Signal Transduction
Cell(Cambridge,Mass.), 139, 2009
2J5T
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BU of 2j5t by Molmil
Glutamate 5-kinase from Escherichia coli complexed with glutamate
Descriptor: CHLORIDE ION, GLUTAMATE 5-KINASE, GLUTAMIC ACID, ...
Authors:Marco-Marin, C, Gil-Ortiz, F, Perez-Arellano, I, Cervera, J, Fita, I, Rubio, V.
Deposit date:2006-09-19
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Novel Two-Domain Architecture within the Amino Acid Kinase Enzyme Family Revealed by the Crystal Structure of Escherichia Coli Glutamate 5-Kinase.
J.Mol.Biol., 367, 2007
2J5V
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BU of 2j5v by Molmil
GLUTAMATE 5-KINASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTAMYL-5-PHOSPHATE AND PYROGLUTAMIC ACID
Descriptor: GAMMA-GLUTAMYL PHOSPHATE, GLUTAMATE 5-KINASE, MAGNESIUM ION, ...
Authors:Marco-Marin, C, Gil-Ortiz, F, Perez-Arellano, I, Cervera, J, Fita, I, Rubio, V.
Deposit date:2006-09-19
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Two-Domain Architecture within the Amino Acid Kinase Enzyme Family Revealed by the Crystal Structure of Escherichia Coli Glutamate 5-Kinase.
J.Mol.Biol., 367, 2007
2JJ4
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BU of 2jj4 by Molmil
The complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC7942
Descriptor: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMATE, NITROGEN REGULATORY PROTEIN P-II
Authors:Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
Deposit date:2007-07-04
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
Proc.Natl.Acad.Sci.USA, 104, 2007
2JER
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BU of 2jer by Molmil
Agmatine deiminase of Enterococcus faecalis catalyzing its reaction.
Descriptor: AGMATINE DEIMINASE
Authors:Tavarez, S, Llacer, J.L, Rubio, V.
Deposit date:2007-01-19
Release date:2007-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Gene Cluster for Agmatine Catabolism of Enterococcus Faecalis: Study of Recombinant Putrescine Transcarbamylase and Agmatine Deiminase and a Snapshot of Agmatine Deiminase Catalyzing its Reaction.
J.Bacteriol., 189, 2007
2JI5
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BU of 2ji5 by Molmil
Structure of UMP kinase from Pyrococcus furiosus complexed with UTP
Descriptor: URIDINE 5'-TRIPHOSPHATE, URIDYLATE KINASE
Authors:Marco-Marin, C, Rubio, V.
Deposit date:2007-02-26
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Structure of Ump Kinase from Pyrococcus Furiosus Complexed with Utp
To be Published
3ZZF
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BU of 3zzf by Molmil
Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase complexed with its substrate N- acetylglutamate
Descriptor: 1,2-ETHANEDIOL, ACETYLGLUTAMATE KINASE, CHLORIDE ION, ...
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
3ZZI
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BU of 3zzi by Molmil
Crystal structure of a tetrameric acetylglutamate kinase from Saccharomyces cerevisiae
Descriptor: ACETYLGLUTAMATE KINASE
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
3ZZG
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BU of 3zzg by Molmil
Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase without ligands
Descriptor: ACETYLGLUTAMATE KINASE
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
3ZZH
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BU of 3zzh by Molmil
Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase in complex with its feed- back inhibitor L-arginine
Descriptor: 1,2-ETHANEDIOL, ACETYLGLUTAMATE KINASE, ARGININE, ...
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
4AB7
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BU of 4ab7 by Molmil
Crystal structure of a tetrameric acetylglutamate kinase from Saccharomyces cerevisiae complexed with its substrate N- acetylglutamate
Descriptor: N-ACETYL-L-GLUTAMATE, PROTEIN ARG5,6, MITOCHONDRIAL
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-12-07
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
4A8T
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BU of 4a8t by Molmil
Crystal structure of putrescine transcarbamylase from Enterococcus faecalis lacking its C-terminal Helix, with bound N5-(phosphonoacetyl) -L-ornithine
Descriptor: N-(PHOSPHONOACETYL)-L-ORNITHINE, NICKEL (II) ION, PUTRESCINE CARBAMOYLTRANSFERASE, ...
Authors:Polo, L.M, Gil-Ortiz, F, Rubio, V.
Deposit date:2011-11-21
Release date:2012-02-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:New Insight Into the Transcarbamylase Family: The Structure of Putrescine Transcarbamylase, a Key Catalyst for Fermentative Utilization of Agmatine
Plos One, 7, 2012
4A8P
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BU of 4a8p by Molmil
Crystal structure of putrescine transcarbamylase from Enterococcus faecalis with N5-(phosphonoacetyl)-L-ornithine
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, N-(PHOSPHONOACETYL)-L-ORNITHINE, NICKEL (II) ION, ...
Authors:Polo, L.M, Gil-Ortiz, F, Rubio, V.
Deposit date:2011-11-21
Release date:2012-02-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:New Insight Into the Transcarbamylase Family: The Structure of Putrescine Transcarbamylase, a Key Catalyst for Fermentative Utilization of Agmatine
Plos One, 7, 2012
4A8H
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BU of 4a8h by Molmil
Crystal structure of putrescine transcarbamylase from Enterococcus faecalis with N-(phosphonoacetyl)-putrescine
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, N-(PHOSPHONOACETYL)-PUTRESCINE, ...
Authors:Polo, L.M, Gil-Ortiz, F, Rubio, V.
Deposit date:2011-11-21
Release date:2012-02-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:New Insight Into the Transcarbamylase Family: The Structure of Putrescine Transcarbamylase, a Key Catalyst for Fermentative Utilization of Agmatine
Plos One, 7, 2012
4AM8
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BU of 4am8 by Molmil
Crystal structure of the R54G mutant of putrescine transcarbamylase from Enterococcus faecalis bound to a curing guanidinium ion
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLUTAMINE, GUANIDINE, ...
Authors:Polo, L.M, Rubio, V.
Deposit date:2012-03-08
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Curing a Mutant Transcarbamylase with a Small Molecule: A Crystallographic View
To be Published
7O1B
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BU of 7o1b by Molmil
Human phosphomannomutase 2 (PMM2) wild-type co-crystallized with the activator glucose 1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-03-29
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
7O4G
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BU of 7o4g by Molmil
Human phosphomannomutase 2 (PMM2) wild-type soaked with the activator glucose 1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-04-06
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
7O0C
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BU of 7o0c by Molmil
Human phosphomannomutase 2 (PMM2) wild-type in apo state
Descriptor: CHLORIDE ION, MAGNESIUM ION, Phosphomannomutase 2, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-03-26
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
7O5Z
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BU of 7o5z by Molmil
Human phosphomannomutase 2 (PMM2) with mutation T237M in apo state
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-04-09
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
7O58
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BU of 7o58 by Molmil
Human phosphomannomutase 2 (PMM2) with mutation T237M in complex with the activator glucose 1,6-bisphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Ramon-Maiques, S, Briso-Montiano, A, Del Cano-Ochoa, F, Vilas, A, Perez, B, Rubio, V.
Deposit date:2021-04-08
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Insight on molecular pathogenesis and pharmacochaperoning potential in phosphomannomutase 2 deficiency, provided by novel human phosphomannomutase 2 structures.
J Inherit Metab Dis, 45, 2022
2WXB
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BU of 2wxb by Molmil
Acetylglutamate kinase from Escherichia coli free of substrates
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Ramon-Maiques, S, Gil-Ortiz, F, Rubio, V.
Deposit date:2009-11-06
Release date:2010-05-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Crystal Structures of Escherichia Coli N-Acetyl-L-Glutamate Kinase Demonstrate the Cycling between Open and Closed Conformations.
J.Mol.Biol., 399, 2010
2X2W
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BU of 2x2w by Molmil
Acetylglutamate kinase from Escherichia coli bound to N-acetyl-L-glutamyl-5-phosphate
Descriptor: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMYL 5-PHOSPHATE, SULFATE ION
Authors:Gil-Ortiz, F, Rubio, V.
Deposit date:2010-01-18
Release date:2010-05-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two crystal structures of Escherichia coli N-acetyl-L-glutamate kinase demonstrate the cycling between open and closed conformations.
J. Mol. Biol., 399, 2010
2XKO
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BU of 2xko by Molmil
Crystal structure of the complex of NtcA with its transcriptional co- activator PipX
Descriptor: 2-OXOGLUTARIC ACID, GLOBAL NITROGEN REGULATOR, PIPX
Authors:Llacer, J.L, Castells, M.A, Rubio, V.
Deposit date:2010-07-11
Release date:2010-08-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010

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