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PDB: 293 results

4K1G
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BU of 4k1g by Molmil
Structure of E. coli Nfo(Endo IV)-H69A mutant bound to a cleaved DNA duplex containing a alphadA:T basepair
Descriptor: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*CP*C)-3'), ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2013-04-05
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases.
Proc.Natl.Acad.Sci.USA, 110, 2013
3EIH
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BU of 3eih by Molmil
Crystal structure of S.cerevisiae Vps4 in the presence of ATPgammaS
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Gonciarz, M.D, Whitby, F.G, Eckert, D.M, Kieffer, C, Heroux, A, Sundquist, W.I, Hill, C.P.
Deposit date:2008-09-15
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Biochemical and structural studies of yeast vps4 oligomerization.
J.Mol.Biol., 384, 2008
3EIE
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BU of 3eie by Molmil
Crystal Structure of S.cerevisiae Vps4 in the SO4-bound state
Descriptor: SULFATE ION, Vacuolar protein sorting-associated protein 4
Authors:Gonciarz, M.D, Whitby, F.G, Eckert, D.M, Kieffer, C, Heroux, A, Sundquist, W.I, Hill, C.P.
Deposit date:2008-09-15
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and structural studies of yeast vps4 oligomerization.
J.Mol.Biol., 384, 2008
4HTH
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BU of 4hth by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature
Descriptor: THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Wheeler, E.L, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B, Robinson, A.C.
Deposit date:2012-11-01
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+VIAGLA at cryogenic temperature
To be Published
4IAL
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BU of 4ial by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS H121E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Bell-Upp, P.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-12-06
Release date:2013-01-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS H121E at cryogenic temperature
To be Published
4IZ8
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BU of 4iz8 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS H8E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Bell-Upp, P.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2013-01-29
Release date:2013-02-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS H8E at cryogenic temperature
To be Published
4EA5
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BU of 4ea5 by Molmil
Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-22
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012
4L1U
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BU of 4l1u by Molmil
Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide
Descriptor: GLYCEROL, RNA polymerase-associated protein RTF1 homolog, SULFATE ION, ...
Authors:Wier, A.D, Heroux, A, VanDemark, A.P.
Deposit date:2013-06-03
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.424 Å)
Cite:Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin.
Proc.Natl.Acad.Sci.USA, 110, 2013
3E66
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BU of 3e66 by Molmil
Crystal structure of the beta-finger domain of yeast Prp8
Descriptor: PRP8
Authors:Yang, K, Zhang, L, Xu, T, Heroux, A, Zhao, R.
Deposit date:2008-08-14
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the beta-finger domain of Prp8 reveals analogy to ribosomal proteins.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BIP
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BU of 3bip by Molmil
Crystal structure of yeast Spt16 N-terminal Domain
Descriptor: FACT complex subunit SPT16
Authors:VanDemark, A.P, Xin, H, McCullough, L, Rawlins, R, Bentley, S, Heroux, A, David, S.J, Hill, C.P, Formosa, T.
Deposit date:2007-11-30
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and functional analysis of the Spt16p N-terminal domain reveals overlapping roles of yFACT subunits.
J.Biol.Chem., 283, 2008
4R0X
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BU of 4r0x by Molmil
Allosteric coupling of conformational transitions in the FK1 domain of FKBP51 near the site of steroid receptor interaction
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:LeMaster, D.M, Mustafi, S.M, Brecher, M, Zhang, J, Heroux, A, Li, H.M, Hernandez, G.
Deposit date:2014-08-02
Release date:2015-05-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Coupling of Conformational Transitions in the N-terminal Domain of the 51-kDa FK506-binding Protein (FKBP51) Near Its Site of Interaction with the Steroid Receptor Proteins.
J.Biol.Chem., 290, 2015
4EVO
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BU of 4evo by Molmil
Crystal structure of Staphylococcal nuclease variant NVIAGA/E122G at cryogenic temperature
Descriptor: PHOSPHATE ION, Thermonuclease
Authors:Doctrow, B.M, Schlessman, J.L, Garcia-Moreno E, B, Heroux, A.
Deposit date:2012-04-26
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Local flexibility as a determinant of pKa values of surface ionizable groups in proteins
To be Published
4GG2
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BU of 4gg2 by Molmil
The crystal structure of glutamate-bound human gamma-glutamyltranspeptidase 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:West, M.B, Chen, Y, Wickham, S, Heroux, A, Cahill, K, Hanigan, M.H, Mooers, B.H.M.
Deposit date:2012-08-04
Release date:2013-09-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Novel Insights into Eukaryotic gamma-Glutamyltranspeptidase 1 from the Crystal Structure of the Glutamate-bound Human Enzyme.
J.Biol.Chem., 288, 2013
3KTF
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BU of 3ktf by Molmil
Structure of the N-terminal BRCT domain of human microcephalin (MCPH1).
Descriptor: CHLORIDE ION, Microcephalin
Authors:Singh, N, Heroux, A, Thompson, J.R, Mer, G.
Deposit date:2009-11-25
Release date:2009-12-15
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of N-terminal BRCT domain of human microcephalin (MCPH1)
To be Published
4L1P
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BU of 4l1p by Molmil
Crystal Structure of Human Rtf1 Plus3 domain
Descriptor: GLYCEROL, RNA polymerase-associated protein RTF1 homolog
Authors:Wier, A.D, Heroux, A, VanDemark, A.P.
Deposit date:2013-06-03
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin.
Proc.Natl.Acad.Sci.USA, 110, 2013
4DF7
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BU of 4df7 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23L/V99I at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-01-23
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Pressure effects in proteins
To be Published
4E9E
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BU of 4e9e by Molmil
Structure of the glycosylase domain of MBD4
Descriptor: Methyl-CpG-binding domain protein 4
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-21
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012
4E9H
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BU of 4e9h by Molmil
structure of glycosylase domain of MBD4 bound to 5hmU containing DNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-21
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012
4DU9
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BU of 4du9 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V74A at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Clark, I, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-02-21
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Pressure effects in proteins
To be Published
4E9G
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BU of 4e9g by Molmil
structure of the glycosylase domain of MBD4 bound to thymine containing DNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*CP*GP*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-21
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012
4E9F
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BU of 4e9f by Molmil
Structure of the glycosylase domain of MBD4 bound to AP site containing DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*CP*GP*(3DR)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-21
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012
4EQO
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BU of 4eqo by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V99D at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-04-19
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS V99D at cryogenic temperature
To be Published
4DFA
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BU of 4dfa by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L36A at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Clark, I.A, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-01-23
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.404 Å)
Cite:Pressure effects in proteins
To be Published
4DGZ
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BU of 4dgz by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L125A at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Nam, S.P, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2012-01-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Pressure effects in proteins
To be Published
4EA4
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BU of 4ea4 by Molmil
Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4
Authors:Morera, S, Vigouroux, A.
Deposit date:2012-03-22
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Nucleic Acids Res., 40, 2012

224004

数据于2024-08-21公开中

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