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PDB: 634 results

6O85
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to eukaryotic translation initiation factor 2 from Homo sapiens
Descriptor: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ...
Authors:Nguyen, H.C, Kenner, L.R, Frost, A.S.
Deposit date:2019-03-08
Release date:2019-05-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response.
Science, 364, 2019
6O81
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to translation initiation factor 2 from Homo sapiens
Descriptor: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, ...
Authors:Nguyen, H, Kenner, L, Frost, A.
Deposit date:2019-03-08
Release date:2019-05-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response.
Science, 364, 2019
2IN4
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BU of 2in4 by Molmil
Crystal Structure of Myoglobin with Charge Neutralized Heme, ZnDMb-dme
Descriptor: Myoglobin, SULFATE ION, ZINC(II)-DEUTEROPORPHYRIN DIMETHYLESTER
Authors:Wheeler, K.E, Nocek, J.M, Cull, D.A, Yatsunyk, L.A, Rosenzweig, A.C, Hoffman, B.M.
Deposit date:2006-10-05
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Dynamic docking of cytochrome b5 with myoglobin and alpha-hemoglobin: heme-neutralization "squares" and the binding of electron-transfer-reactive configurations.
J.Am.Chem.Soc., 129, 2007
6CAJ
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BU of 6caj by Molmil
Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens
Descriptor: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
Authors:Tsai, J.C, Miller-Vedam, L.E, Anand, A.A, Jaishankar, P, Nguyen, H.C, Renslo, A.R, Frost, A, Walter, P.
Deposit date:2018-01-31
Release date:2018-04-11
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the nucleotide exchange factor eIF2B reveals mechanism of memory-enhancing molecule.
Science, 359, 2018
1PV0
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Structure of the Sda antikinase
Descriptor: Sda
Authors:Rowland, S.L, Burkholder, W.F, Maciejewski, M.W, Grossman, A.D, King, G.F.
Deposit date:2003-06-26
Release date:2004-04-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and mechanism of Sda: an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis
Mol.Cell, 13, 2004
4A6B
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Stereoselective Synthesis, X-ray Analysis, and Biological Evaluation of a New Class of Lactam Based HIV-1 Protease Inhibitors
Descriptor: METHYL ((S)-1-(2-([1,1'-BIPHENYL]-4-YLMETHYL)-2-(3-((3S,4S)-3-BENZYL-4-HYDROXY-1-((1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL)-2-OXOPYRROLIDIN-3-YL)PROPYL)HYDRAZINYL)-3,3-DIMETHYL-1-OXOBUTAN-2-YL)CARBAMATE, POL PROTEIN
Authors:Wu, X, Ohrngren, P, Joshi, A.A, Trejos, A, Persson, M, Unge, J, Arvela, R.K, Wallberg, H, Vrang, L, Rosenquist, A, Samuelsson, B.B, Unge, J, Larhed, M.
Deposit date:2011-11-01
Release date:2012-05-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis, X-Ray Analysis, and Biological Evaluation of a New Class of Stereopure Lactam-Based HIV-1 Protease Inhibitors.
J.Med.Chem., 55, 2012
6OFX
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Non-rotated ribosome (Structure I)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
Deposit date:2019-04-01
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6O9Z
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B bound to eukaryotic translation initiation factor 2 from Homo sapiens
Descriptor: Eukaryotic translation initiation factor 2 subunit 1, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
Authors:Nguyen, H.C, Kenner, L.R, Frost, A.S.
Deposit date:2019-03-15
Release date:2019-05-15
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response.
Science, 364, 2019
6OG7
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BU of 6og7 by Molmil
70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Demo, G, Loveland, A.B, Xu, C, Korostelev, A.A.
Deposit date:2019-04-01
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Extensive ribosome and RF2 rearrangements during translation termination.
Elife, 8, 2019
6QT9
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BU of 6qt9 by Molmil
Cryo-EM structure of SH1 full particle.
Descriptor: ORF 24, ORF 25, ORF 31, ...
Authors:De Colibus, L, Roine, E, Walter, T.S, Ilca, S.L, Wang, X, Wang, N, Roseman, A.M, Bamford, D, Huiskonen, J.T, Stuart, D.I.
Deposit date:2019-02-22
Release date:2019-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Assembly of complex viruses exemplified by a halophilic euryarchaeal virus.
Nat Commun, 10, 2019
1PLS
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BU of 1pls by Molmil
SOLUTION STRUCTURE OF A PLECKSTRIN HOMOLOGY DOMAIN
Descriptor: PLECKSTRIN HOMOLOGY DOMAIN
Authors:Yoon, H.S, Hajduk, P.J, Petros, A.M, Olejniczak, E.T, Meadows, R.P, Fesik, S.W.
Deposit date:1994-05-03
Release date:1995-06-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of a pleckstrin-homology domain.
Nature, 369, 1994
4A4Q
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Stereoselective Synthesis, X-ray Analysis, and Biological Evaluation of a New Class of Lactam Based HIV-1 Protease Inhibitors
Descriptor: PROTEASE, methyl [(2S)-1-{2-(2-{(3R,4S)-3-benzyl-4-hydroxy-1-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]-2-oxopyrrolidin-3-yl}ethyl)-2-[4-(pyridin-4-yl)benzyl]hydrazinyl}-3,3-dimethyl-1-oxobutan-2-yl]carbamate
Authors:Wu, X, Ohrngren, P, Joshi, A.A, Trejos, A, Persson, M, Arvela, R.K, Wallberg, H, Vrang, L, Rosenquist, A, Samuelsson, B, Unge, J, Larhed, M.
Deposit date:2011-10-19
Release date:2012-11-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis, X-Ray Analysis, and Biological Evaluation of a New Class of Stereopure Lactam-Based HIV-1 Protease Inhibitors.
J.Med.Chem., 55, 2012
2W0F
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BU of 2w0f by Molmil
Potassium Channel KcsA-Fab Complex with Tetraoctylammonium
Descriptor: ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, COBALT (II) ION, ...
Authors:Lenaeus, M.J, Focia, P.J, Wagner, T, Gross, A.
Deposit date:2008-08-14
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
5ELA
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BU of 5ela by Molmil
The structure of DHAR1 from Arabidopsis thaliana
Descriptor: GLYCEROL, Glutathione S-transferase DHAR1, mitochondrial
Authors:Menault, M, Roszak, A.W, Lapthorn, A.J.
Deposit date:2015-11-04
Release date:2016-11-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Arabidopsis thaliana DHAR1 apo structure
To Be Published
5ICQ
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BU of 5icq by Molmil
Methanobactin periplasmic binding protein
Descriptor: Methylocystis parvus OBBP MbnE, SULFATE ION
Authors:Dassama, L.M.K, Rosenzweig, A.C.
Deposit date:2016-02-23
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Methanobactin transport machinery.
Proc.Natl.Acad.Sci.USA, 113, 2016
1Y3J
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BU of 1y3j by Molmil
Solution structure of the copper(I) form of the fifth domain of Menkes protein
Descriptor: COPPER (II) ION, Copper-transporting ATPase 1
Authors:Banci, L, Chasapis, C.T, Ciofi-Baffoni, S, Hadjiliadis, N, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-11-25
Release date:2005-03-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An NMR study of the interaction between the human copper(I) chaperone and the second and fifth metal-binding domains of the Menkes protein
Febs J., 272, 2005
2H79
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BU of 2h79 by Molmil
Crystal Structure of human TR alpha bound T3 in orthorhombic space group
Descriptor: 3,5,3'TRIIODOTHYRONINE, THRA protein
Authors:Nascimento, A.S, Dias, S.M.G, Nunes, F.M, Aparicio, R, Bleicher, L, Ambrosio, A.L.B, Figueira, A.C.M, Santos, M.A.M, Neto, M.O, Fischer, H, Togashi, H.F.M, Craievich, A.F, Garrat, R.C, Baxter, J.D, Webb, P, Polikarpov, I.
Deposit date:2006-06-01
Release date:2006-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural rearrangements in the thyroid hormone receptor hinge domain and their putative role in the receptor function.
J.Mol.Biol., 360, 2006
2HC8
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BU of 2hc8 by Molmil
Structure of the A. fulgidus CopA A-domain
Descriptor: Cation-transporting ATPase, P-type
Authors:Sazinsky, M.H, Agawal, S, Arguello, J.M, Rosenzweig, A.C.
Deposit date:2006-06-15
Release date:2006-09-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the Actuator Domain from the Archaeoglobus fulgidus Cu(+)-ATPase(,).
Biochemistry, 45, 2006
6E1C
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BU of 6e1c by Molmil
Crystal structure of a MauG-like protein associated with microbial copper homeostasis
Descriptor: CALCIUM ION, Di-heme enzyme, HEME C
Authors:Dassama, L.M.K, Rosenzweig, A.C.
Deposit date:2018-07-09
Release date:2019-07-17
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.617 Å)
Cite:MbnH is a diheme MauG-like protein associated with microbial copper homeostasis.
J.Biol.Chem., 294, 2019
1TL5
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BU of 1tl5 by Molmil
Solution structure of apoHAH1
Descriptor: Copper transport protein ATOX1
Authors:Anastassopoulou, I, Banci, L, Bertini, I, Cantini, F, Katsari, E, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-06-09
Release date:2004-10-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the Apo and Copper(I)-Loaded Human Metallochaperone HAH1.
Biochemistry, 43, 2004
5ICU
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BU of 5icu by Molmil
The crystal structure of CopC from Methylosinus trichosporium OB3b
Descriptor: CHLORIDE ION, COPPER (II) ION, CopC, ...
Authors:Lawton, T.J, Hurley, J.D, Rosenzweig, A.C.
Deposit date:2016-02-23
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The CopC Family: Structural and Bioinformatic Insights into a Diverse Group of Periplasmic Copper Binding Proteins.
Biochemistry, 55, 2016
4D8G
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BU of 4d8g by Molmil
Chlamydia trachomatis NrdB with a Mn/Fe cofactor (procedure 2 - low Mn)
Descriptor: FE (III) ION, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Dassama, L.M.K, Boal, A.K, Krebs, C, Rosenzweig, A.C, Bollinger Jr, J.M.
Deposit date:2012-01-10
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Evidence that the beta subunit of Chlamydia trachomatis ribonucleotide reductase is active with the manganese ion of its manganese(IV)/iron(III) cofactor in site 1.
J.Am.Chem.Soc., 134, 2012
2HU9
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BU of 2hu9 by Molmil
X-ray structure of the Archaeoglobus fulgidus CopZ N-terminal Domain
Descriptor: ACETIC ACID, FE2/S2 (INORGANIC) CLUSTER, Mercuric transport protein periplasmic component, ...
Authors:Sazinsky, M.H, LeMoine, B, Arguello, J.M, Rosenzweig, A.C.
Deposit date:2006-07-26
Release date:2007-07-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Characterization and structure of a Zn2+ and [2Fe-2S]-containing copper chaperone from Archaeoglobus fulgidus.
J.Biol.Chem., 282, 2007
1N9C
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Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes
Descriptor: Cytochrome c-553, HEME C
Authors:Bartalesi, I, Bertini, I, Rosato, A.
Deposit date:2002-11-23
Release date:2003-02-04
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes
Biochemistry, 42, 2003
1SMQ
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BU of 1smq by Molmil
Structure of the Ribonucleotide Reductase Rnr2 Homodimer from Saccharomyces cerevisiae
Descriptor: Ribonucleoside-diphosphate reductase small chain 1
Authors:Sommerhalter, M, Voegtli, W.C, Perlstein, D.L, Ge, J, Stubbe, J, Rosenzweig, A.C.
Deposit date:2004-03-09
Release date:2004-08-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the yeast ribonucleotide reductase Rnr2 and Rnr4 homodimers.
Biochemistry, 43, 2004

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