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PDB: 238 results

6MSO
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BU of 6mso by Molmil
Crystal structure of mitochondrial fumarate hydratase from Leishmania major in a complex with inhibitor thiomalate
Descriptor: (2S)-2-sulfanylbutanedioic acid, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Feliciano, P.R, Drennan, C.L, Nonato, M.C.
Deposit date:2018-10-17
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Crystal Structures of Fumarate Hydratases from Leishmania major in a Complex with Inhibitor 2-Thiomalate.
ACS Chem. Biol., 14, 2019
6VUE
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BU of 6vue by Molmil
wild-type choline TMA lyase in complex with 1-methyl-1,2,3,6-tetrahydropyridin-3-ol
Descriptor: (3S)-1-methyl-1,2,3,6-tetrahydropyridin-3-ol, Choline trimethylamine-lyase, SODIUM ION
Authors:Ortega, M.A, Drennan, C.L.
Deposit date:2020-02-15
Release date:2020-11-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Discovery of a Cyclic Choline Analog That Inhibits Anaerobic Choline Metabolism by Human Gut Bacteria.
Acs Med.Chem.Lett., 11, 2020
6VXC
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BU of 6vxc by Molmil
Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile
Descriptor: GLYCEROL, Trans-4-hydroxy-L-proline dehydratase
Authors:Backman, L.R.F, Drennan, C.L.
Deposit date:2020-02-21
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme.
Elife, 9, 2020
5D1Y
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BU of 5d1y by Molmil
Low resolution crystal structure of human ribonucleotide reductase alpha6 hexamer in complex with dATP
Descriptor: Ribonucleoside-diphosphate reductase large subunit
Authors:Ando, N, Li, H, Brignole, E.J, Thompson, S, McLaughlin, M.I, Page, J, Asturias, F, Stubbe, J, Drennan, C.L.
Deposit date:2015-08-04
Release date:2016-01-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (9.005 Å)
Cite:Allosteric Inhibition of Human Ribonucleotide Reductase by dATP Entails the Stabilization of a Hexamer.
Biochemistry, 55, 2016
4K38
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BU of 4k38 by Molmil
Native anSMEcpe with bound AdoMet and Kp18Cys peptide
Descriptor: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, GLYCEROL, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-04-10
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
4PKF
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BU of 4pkf by Molmil
Benzylsuccinate synthase alpha-beta-gamma complex
Descriptor: CHLORIDE ION, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-05-14
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structures of benzylsuccinate synthase elucidate roles of accessory subunits in glycyl radical enzyme activation and activity.
Proc.Natl.Acad.Sci.USA, 111, 2014
8VHQ
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BU of 8vhq by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and ATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
8VHR
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BU of 8vhr by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and GTP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
8VHP
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BU of 8vhp by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to CDP and two molecules of ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
6ONS
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BU of 6ons by Molmil
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase with the D-cluster ligating cysteines mutated to alanines, coexpressed with CooC, as-isolated
Descriptor: Carbon monoxide dehydrogenase, FE(4)-NI(1)-S(4) CLUSTER, IRON/SULFUR CLUSTER
Authors:Cohen, S.E, Wittenborn, E.C, Drennan, C.L.
Deposit date:2019-04-22
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.485 Å)
Cite:Structural insight into metallocofactor maturation in carbon monoxide dehydrogenase.
J.Biol.Chem., 294, 2019
6DS2
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BU of 6ds2 by Molmil
Crystal structure of Ni(II)-bound human calprotectin
Descriptor: NICKEL (II) ION, Protein S100-A8, Protein S100-A9, ...
Authors:Nolan, E.M, Drennan, C.L, Nakashige, T.G.
Deposit date:2018-06-13
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biophysical Examination of the Calcium-Modulated Nickel-Binding Properties of Human Calprotectin Reveals Conformational Change in the EF-Hand Domains and His3Asp Site.
Biochemistry, 57, 2018
6ONC
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BU of 6onc by Molmil
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase produced without CooC, as-isolated
Descriptor: CHLORIDE ION, Carbon monoxide dehydrogenase, FE (III) ION, ...
Authors:Wittenborn, E.C, Cohen, S.E, Drennan, C.L.
Deposit date:2019-04-21
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insight into metallocofactor maturation in carbon monoxide dehydrogenase.
J.Biol.Chem., 294, 2019
2Z8Y
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BU of 2z8y by Molmil
Xenon-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase(CODH/ACS) from Moorella thermoacetica
Descriptor: COPPER (I) ION, Carbon monoxide dehydrogenase/acetyl CoA synthase subunit alpha, Carbon monoxide dehydrogenase/acetyl CoA synthase subunit beta, ...
Authors:Doukov, T.I, Blasiak, L.C, Drennan, C.L.
Deposit date:2007-09-12
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Xenon in and at the End of the Tunnel of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase
Biochemistry, 47, 2008
2E7F
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BU of 2e7f by Molmil
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase complexed with methyltetrahydrofolate to 2.2 Angsrom resolution
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase, CALCIUM ION
Authors:Doukov, T.I, Drennan, C.L, Hemmi, H, Ragsdale, S.W.
Deposit date:2007-01-09
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic evidence for an extended hydrogen-bonding network in catalysis of methyl group transfer. Role of an active site asparagine residue in activation of methyl transfer by methyltransferases.
J.Biol.Chem., 282, 2007
4K36
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BU of 4k36 by Molmil
His6 tagged anSMEcpe with bound AdoMet
Descriptor: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-04-10
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
7LHS
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BU of 7lhs by Molmil
Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis in a complex with substrate APS
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-PHOSPHOSULFATE, IRON/SULFUR CLUSTER, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2021-01-26
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal Structure of the [4Fe-4S] Cluster-Containing Adenosine-5'-phosphosulfate Reductase from Mycobacterium tuberculosis .
Acs Omega, 6, 2021
4PKC
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BU of 4pkc by Molmil
Benzylsuccinate alpha-gamma complex
Descriptor: CHLORIDE ION, GLYCEROL, TutD, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-05-14
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of benzylsuccinate synthase elucidate roles of accessory subunits in glycyl radical enzyme activation and activity.
Proc.Natl.Acad.Sci.USA, 111, 2014
4M7S
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BU of 4m7s by Molmil
Crystal structure of SeMet BtrN in an OPEN conformation
Descriptor: BtrN, GLYCEROL, IMIDAZOLE, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-08-12
Release date:2013-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.
Proc.Natl.Acad.Sci.USA, 110, 2013
4NJK
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BU of 4njk by Molmil
Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet, 7-carboxy-7-deazaguanine, and Mg2+
Descriptor: 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ...
Authors:Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L.
Deposit date:2013-11-10
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism.
Nat.Chem.Biol., 10, 2014
6B9T
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BU of 6b9t by Molmil
Crystal structure of MPnS with substrate 2-hydroxyethylphosphonate (2-HEP) and Fe(II) bound
Descriptor: (2-hydroxyethyl)phosphonic acid, FE (III) ION, FORMIC ACID, ...
Authors:Born, D.A, Drennan, C.L.
Deposit date:2017-10-11
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for methylphosphonate biosynthesis.
Science, 358, 2017
6B9S
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BU of 6b9s by Molmil
MPnS crystallized in the absence of substrate
Descriptor: FE (III) ION, Methylphosphonate synthase
Authors:Born, D.A, Drennan, C.L.
Deposit date:2017-10-11
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:Structural basis for methylphosphonate biosynthesis.
Science, 358, 2017
6V59
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BU of 6v59 by Molmil
Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264
Descriptor: CHLORIDE ION, Di-haem cytochrome c peroxidase family protein, GLYCEROL, ...
Authors:Cohen, S.E, Drennan, C.L.
Deposit date:2019-12-03
Release date:2020-07-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:A Stable Ferryl Porphyrin at the Active Site of Y463M BthA.
J.Am.Chem.Soc., 142, 2020
4IXM
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BU of 4ixm by Molmil
Crystal structure of Zn(II)-bound YjiA GTPase from E. coli
Descriptor: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
Authors:Jost, M, Ryan, K.S, Turo, K.E, Drennan, C.L.
Deposit date:2013-01-26
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
7KQ4
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BU of 7kq4 by Molmil
Structure of isethionate sulfite-lyase from Bilophila wadsworthia with glycerol bound
Descriptor: GLYCEROL, Isethionate sulfite-lyase
Authors:Dawson, C.D, Backman, L.R.F, Drennan, C.L.
Deposit date:2020-11-13
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Molecular basis of C-S bond cleavage in the glycyl radical enzyme isethionate sulfite-lyase.
Cell Chem Biol, 28, 2021
7KQ3
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BU of 7kq3 by Molmil
Structure of isethionate sulfite-lyase from Bilophila wadsworthia with substrate isethionate bound
Descriptor: 2-hydroxyethylsulfonic acid, Isethionate sulfite-lyase
Authors:Dawson, C.D, Backman, L.R.F, Drennan, C.L.
Deposit date:2020-11-13
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.688 Å)
Cite:Molecular basis of C-S bond cleavage in the glycyl radical enzyme isethionate sulfite-lyase.
Cell Chem Biol, 28, 2021

226707

数据于2024-10-30公开中

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