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PDB: 776 results

2GCE
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BU of 2gce by Molmil
The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety
Descriptor: (R)-IBUPROFENOYL-COENZYME A, (S)-IBUPROFENOYL-COENZYME A, probable alpha-methylacyl-CoA racemase MCR
Authors:Bhaumik, P, Wierenga, R.K.
Deposit date:2006-03-14
Release date:2007-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface
J.Mol.Biol., 367, 2007
2GCI
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The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an asparte/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety
Descriptor: (R)-2-METHYLMYRISTOYL-COENZYME A, GLYCEROL, probable alpha-methylacyl-CoA racemase MCR
Authors:Bhaumik, P, Wierenga, R.K.
Deposit date:2006-03-14
Release date:2007-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface
J.Mol.Biol., 367, 2007
2GD2
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The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety
Descriptor: ACETOACETYL-COENZYME A, GLYCEROL, probable alpha-methylacyl-CoA racemase MCR
Authors:Bhaumik, P, Wierenga, R.K.
Deposit date:2006-03-15
Release date:2007-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface
J.Mol.Biol., 367, 2007
1KV5
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BU of 1kv5 by Molmil
Structure of Trypanosoma brucei brucei TIM with the salt-bridge-forming residue Arg191 mutated to Ser
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, ...
Authors:Kursula, I, Partanen, S, Lambeir, A.-M, Wierenga, R.K.
Deposit date:2002-01-25
Release date:2002-03-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The importance of the conserved Arg191-Asp227 salt bridge of triosephosphate isomerase for folding, stability, and catalysis
FEBS Lett., 518, 2002
1MSS
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BU of 1mss by Molmil
LARGE SCALE STRUCTURAL REARRANGEMENTS OF THE FRONT LOOPS IN MONOMERISED TRIOSEPHOSPHATE ISOMERASE, AS DEDUCED FROM THE COMPARISON OF THE STRUCTURAL PROPERTIES OF MONOTIM AND ITS POINT MUTATION VARIANT MONOSS
Descriptor: TRIOSEPHOSPHATE ISOMERASE
Authors:Radha Kishan, K.V, Wierenga, R.K.
Deposit date:1994-07-27
Release date:1994-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8.
Structure, 3, 1995
2RNF
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BU of 2rnf by Molmil
X-RAY CRYSTAL STRUCTURE OF HUMAN RIBONUCLEASE 4 IN COMPLEX WITH D(UP)
Descriptor: 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, RIBONUCLEASE 4
Authors:Terzyan, S.S, Peracaula, R, De Llorens, R, Tsushima, Y, Yamada, H, Seno, M, Gomis-Ruth, F.X, Coll, M.
Deposit date:1998-11-03
Release date:1999-11-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The three-dimensional structure of human RNase 4, unliganded and complexed with d(Up), reveals the basis for its uridine selectivity.
J.Mol.Biol., 285, 1999
2CB8
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BU of 2cb8 by Molmil
High resolution crystal structure of liganded human L-ACBP
Descriptor: 2-METHOXYETHANOL, ACYL-COA-BINDING PROTEIN, SULFATE ION, ...
Authors:Taskinen, J.P, van Aalten, D.M, Knudsen, J, Wierenga, R.K.
Deposit date:2006-01-03
Release date:2006-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High Resolution Crystal Structures of Unliganded and Liganded Human Liver Acbp Reveal a New Mode of Binding for the Acyl-Coa Ligand.
Proteins: Struct., Funct., Bioinf., 66, 2007
2VCY
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BU of 2vcy by Molmil
Crystal Structure of 2-Enoyl Thioester Reductase of Human FAS II
Descriptor: SULFATE ION, TRANS-2-ENOYL-COA REDUCTASE
Authors:Haapalainen, A.M, Pudas, R, Smart, O.S, Wierenga, R.K.
Deposit date:2007-09-28
Release date:2008-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural Enzymological Studies of 2-Enoyl Thioester Reductase of the Human Mitochondrial Fas II Pathway: New Insights Into its Substrate Recognition Properties.
J.Mol.Biol., 379, 2008
3IHQ
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BU of 3ihq by Molmil
Crystal Structure of Reduced C10S Spx in Complex with the Alpha C-terminal Domain of RNA Polymeras
Descriptor: DNA-directed RNA polymerase subunit alpha, IMIDAZOLE, Regulatory protein spx
Authors:Newberry, K.J, Brennan, R.G.
Deposit date:2009-07-30
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Promoter recognition by a complex of Spx and the C-terminal domain of the RNA polymerase alpha subunit.
Plos One, 5, 2010
3VIB
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BU of 3vib by Molmil
Structural basis for multidrug recognition and antimicrobial resistance by MTRR, an efflux pump regulator from Neisseria Gonorrhoeae
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, MtrR, PHOSPHATE ION
Authors:Kumaraswami, M, Shafer, W.M, Brennan, R.G.
Deposit date:2011-09-27
Release date:2012-10-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for multidrug recognitionand antimicrobial resistance by MTRR, an efflux pump regulator from Neisseria Gonorrhoeae
TO BE PUBLISHED
2IB9
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BU of 2ib9 by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-11
Release date:2007-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
2IBY
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BU of 2iby by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-12
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
2IB7
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BU of 2ib7 by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-11
Release date:2007-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
2IBU
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BU of 2ibu by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: Acetyl-CoA acetyltransferase, CHLORIDE ION, COENZYME A, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-12
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
2IBW
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BU of 2ibw by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-12
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
2IB8
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BU of 2ib8 by Molmil
Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Haapalainen, A.M, Wierenga, R.K.
Deposit date:2006-09-11
Release date:2007-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function
Biochemistry, 46, 2007
1KQ1
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BU of 1kq1 by Molmil
1.55 A Crystal structure of the pleiotropic translational regulator, Hfq
Descriptor: ACETIC ACID, Host Factor for Q beta
Authors:Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
Deposit date:2002-01-03
Release date:2002-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
1BD4
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BU of 1bd4 by Molmil
UPRT-URACIL COMPLEX
Descriptor: PHOSPHATE ION, URACIL, URACIL PHOSPHORIBOSYLTRANSFERASE
Authors:Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
Deposit date:1998-05-12
Release date:1999-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
1OU6
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BU of 1ou6 by Molmil
Biosynthetic thiolase from Zoogloea ramigera in complex with acetyl-O-pantetheine-11-pivalate
Descriptor: Acetyl-CoA acetyltransferase, PANTOTHENYL-AMINOETHANOL-ACETATE PIVALIC ACID, SULFATE ION
Authors:Kursula, P, Schmitz, W, Wierenga, R.K.
Deposit date:2003-03-24
Release date:2004-06-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The surprising binding mode of a coenzyme A analogue, O-pantetheine-11-pivalate, in the catalytic cavity of bacterial biosynthetic thiolase
To be Published
1WN4
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BU of 1wn4 by Molmil
NMR Structure of VoNTR
Descriptor: VoNTR protein
Authors:Dutton, J.L, Renda, R.F, Waine, C, Clark, R.J, Daly, N.L, Jennings, C.V, Anderson, M.A, Craik, D.J.
Deposit date:2004-07-27
Release date:2004-09-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conserved structural and sequence elements implicated in the processing of gene-encoded circular proteins
J.Biol.Chem., 279, 2004
1WN8
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BU of 1wn8 by Molmil
NMR Structure of OaNTR
Descriptor: Kalata B3/B6
Authors:Dutton, J.L, Renda, R.F, Waine, C, Clark, R.J, Daly, N.L, Jennings, C.V, Anderson, M.A, Craik, D.J.
Deposit date:2004-07-28
Release date:2004-09-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conserved structural and sequence elements implicated in the processing of gene-encoded circular proteins
J.Biol.Chem., 279, 2004
1KQ2
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BU of 1kq2 by Molmil
Crystal Structure of an Hfq-RNA Complex
Descriptor: 5'-R(*AP*UP*UP*UP*UP*UP*G)-3', Host factor for Q beta
Authors:Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
Deposit date:2002-01-03
Release date:2002-07-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
3HTA
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BU of 3hta by Molmil
Crystal structure of multidrug binding protein EbrR complexed with imidazole
Descriptor: EbrA repressor, IMIDAZOLE
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
3HTI
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BU of 3hti by Molmil
Crystal structure of multidrug binding protein EbrR complexed with malachite green
Descriptor: EbrA repressor, MALACHITE GREEN
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
7KWH
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BU of 7kwh by Molmil
Spermidine N-acetyltransferase SpeG K23-Y30 chimera from Vibrio cholerae and hSSAT
Descriptor: PHOSPHATE ION, Spermidine N(1)-acetyltransferase
Authors:Le, V.T.B, Tsimbalyuk, S, Lim, E.Q, Solis, A, Gawat, D, Boeck, P, Renolo, R, Forwood, J.K.
Deposit date:2020-12-01
Release date:2020-12-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Vibrio cholerae SpeG Spermidine/Spermine N -Acetyltransferase Allosteric Loop and beta 6-beta 7 Structural Elements Are Critical for Kinetic Activity.
Front Mol Biosci, 8, 2021

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