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PDB: 1814 件

6SMG
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Structure of Coxsackievirus A10
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Zhao, Y, Zhou, D, Ni, T, Karia, D, Kotecha, A, Wang, X, Rao, Z, Jones, E.Y, Fry, E.E, Ren, J, Stuart, D.I.
登録日2019-08-21
公開日2020-01-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Hand-foot-and-mouth disease virus receptor KREMEN1 binds the canyon of Coxsackie Virus A10.
Nat Commun, 11, 2020
3DOL
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Crystal structure of L100I mutant HIV-1 reverse transcriptase in complex with GW695634.
分子名称: N-({4-[({4-chloro-2-[(3-chloro-5-cyanophenyl)carbonyl]phenoxy}acetyl)amino]-3-methylphenyl}sulfonyl)propanamide, PHOSPHATE ION, Reverse transcriptase/ribonuclease H, ...
著者Chamberlain, P.P, Ren, J, Stammers, D.K.
登録日2008-07-04
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the improved drug resistance profile of new generation benzophenone non-nucleoside HIV-1 reverse transcriptase inhibitors.
J.Med.Chem., 51, 2008
6SNB
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Structure of Coxsackievirus A10 A-particle
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
著者Zhao, Y, Zhou, D, Ni, T, Karia, D, Kotecha, A, Wang, X, Rao, Z, Jones, E.Y, Fry, E.E, Ren, J, Stuart, D.I.
登録日2019-08-23
公開日2020-01-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Hand-foot-and-mouth disease virus receptor KREMEN1 binds the canyon of Coxsackie Virus A10.
Nat Commun, 11, 2020
7ZFE
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BU of 7zfe by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-32 Fab and nanobody C1
分子名称: Nanobody C1, Omi-32 heavy chain, Omi-32 light chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFD
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SARS-CoV-2 Omicron RBD in complex with Omi-25 Fab
分子名称: Omi-25 heavy chain, Omi-25 light chain, Spike protein S1
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFF
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Omi-42 Fab
分子名称: GLYCEROL, Omi-42 Heavy chain, Omi-42 light chain
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFC
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BU of 7zfc by Molmil
SARS-CoV-2 Beta RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs
分子名称: Nanobody C1, Omi-18 heavy chain, Omi-18 light chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF6
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BU of 7zf6 by Molmil
Omi-12 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, GLYCEROL, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF8
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SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab
分子名称: COVOX-150 heavy chain, COVOX-150 light chain, Spike protein S1
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFB
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BU of 7zfb by Molmil
SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody C1, Omi-18 heavy chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF9
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BU of 7zf9 by Molmil
SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab (P21)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-150 heavy chain, COVOX-150 light chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF7
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BU of 7zf7 by Molmil
SARS-CoV-2 Omicron BA.2 RBD in complex with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S1, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF5
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BU of 7zf5 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-12 and Beta-54 Fabs
分子名称: Beta-54 heavy chain, Beta-54 light chain, Omi-12 heavy chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (5.32 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF3
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BU of 7zf3 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-3 and EY6A Fabs
分子名称: EY6A heavy chain, EY6A light chain, GLYCEROL, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF4
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BU of 7zf4 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-9 Fab and nanobody F2
分子名称: Nanobody F2, Omi-9 heavy chain, Omi-9 light chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.18 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFA
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BU of 7zfa by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-6 and COVOX-150 Fabs
分子名称: COVOX-150 heavy chain, COVOX-150 light chain, Omi-6 heavy chain, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-04-01
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.24 Å)
主引用文献Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
3JB4
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BU of 3jb4 by Molmil
Structure of Ljungan virus: insight into picornavirus packaging
分子名称: VP0, VP1, VP3
著者Zhu, L, Wang, X.X, Ren, J.S, Porta, C, Wenham, H, Ekstrom, J.-O, Panjwani, A, Knowles, N.J, Kotecha, A, Siebert, A, Lindberg, M, Fry, E.E, Rao, Z.H, Tuthill, T.J, Stuart, D.I.
登録日2015-07-21
公開日2015-10-21
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of Ljungan virus provides insight into genome packaging of this picornavirus.
Nat Commun, 6, 2015
3BP2
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BU of 3bp2 by Molmil
ROLE OF THE N-TERMINUS IN THE INTERACTION OF PANCREATIC PHOSPHOLIPASE A2 WITH AGGREGATED SUBSTRATES. PROPERTIES AND CRYSTAL STRUCTURE OF TRANSAMINATED PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Drenth, J.
登録日1983-06-27
公開日1983-09-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the N-terminus in the interaction of pancreatic phospholipase A2 with aggregated substrates. Properties and crystal structure of transaminated phospholipase A2
Biochemistry, 23, 1984
9PAP
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BU of 9pap by Molmil
STRUCTURE OF PAPAIN REFINED AT 1.65 ANGSTROMS RESOLUTION
分子名称: METHANOL, PAPAIN
著者Kamphuis, I.G, Drenth, J.
登録日1986-03-31
公開日1986-10-24
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of papain refined at 1.65 A resolution
J.Mol.Biol., 179, 1984
8R80
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BU of 8r80 by Molmil
SARS-CoV-2 Delta RBD in complex with XBB-9 Fab and an anti-Fab nanobody
分子名称: Spike protein S1, XBB-9 Fab heavy chain, XBB-9 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2023-11-27
公開日2024-05-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (4.03 Å)
主引用文献A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024
8R1C
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BU of 8r1c by Molmil
SD1-2 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SD1-2 fab heavy chain, SD1-2 fab light chain, ...
著者Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
登録日2023-11-01
公開日2024-03-13
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献The SARS-CoV-2 neutralizing antibody response to SD1 and its evasion by BA.2.86.
Nat Commun, 15, 2024
8R1D
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BU of 8r1d by Molmil
SD1-3 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SD1-3 Fab Heavy Chain, SD1-3 Fab Light Chain, ...
著者Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
登録日2023-11-01
公開日2024-03-13
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献The SARS-CoV-2 neutralizing antibody response to SD1 and its evasion by BA.2.86.
Nat Commun, 15, 2024
8QZR
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BU of 8qzr by Molmil
SARS-CoV-2 delta RBD complexed with BA.4/5-9 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BA.4/5-9 heavy chain, BA.4/5-9 light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2023-10-29
公開日2024-04-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.77 Å)
主引用文献Emerging variants develop total escape from potent monoclonal antibodies induced by BA.4/5 infection.
Nat Commun, 15, 2024
8R8K
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BU of 8r8k by Molmil
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
分子名称: Spike glycoprotein, XBB-4 Fab Heavy chain, XBB-4 Fab Light chain
著者Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
登録日2023-11-29
公開日2024-05-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024
8QRF
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SARS-CoV-2 delta RBD complexed with XBB-6 and beta-49 Fabs
分子名称: Beta-49 heavy chain, Beta-49 light chain, Spike protein S1, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2023-10-06
公開日2024-05-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024

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件を2024-08-07に公開中

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