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PDB: 302 results

1UXN
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BU of 1uxn by Molmil
Structural basis for allosteric regulation and substrate specificity of the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) from Thermoproteus tenax
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Lorentzen, E, Hensel, R, Pohl, E.
Deposit date:2004-02-27
Release date:2004-08-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Allosteric Regulation and Substrate Specificity of the Non-Phosphorylating Glyceraldehyde 3-Phosphate Dehydrogenase from Thermoproteus Tenax
J.Mol.Biol., 341, 2004
7M18
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BU of 7m18 by Molmil
HeLa-tubulin in complex with cryptophycin 1
Descriptor: Cryptophycin 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Eren, E.
Deposit date:2021-03-12
Release date:2021-09-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Conformational changes in tubulin upon binding cryptophycin-52 reveal its mechanism of action.
J.Biol.Chem., 297, 2021
7M20
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BU of 7m20 by Molmil
18-mer HeLa-tubulin rings in complex with Cryptophycin 1
Descriptor: Cryptophycin 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Eren, E.
Deposit date:2021-03-15
Release date:2021-09-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Conformational changes in tubulin upon binding cryptophycin-52 reveal its mechanism of action.
J.Biol.Chem., 297, 2021
7LXB
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BU of 7lxb by Molmil
HeLa-tubulin in complex with cryptophycin 52
Descriptor: Cryptophycin 52, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Eren, E.
Deposit date:2021-03-03
Release date:2021-09-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Conformational changes in tubulin upon binding cryptophycin-52 reveal its mechanism of action.
J.Biol.Chem., 297, 2021
4DCB
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BU of 4dcb by Molmil
Y. pestis Plasminogen Activator Pla in Complex with Human Plasminogen Activation Loop Peptide ALP11
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ...
Authors:Eren, E, van den Berg, B.
Deposit date:2012-01-17
Release date:2012-06-06
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Structural basis for activation of an integral membrane protease by lipopolysaccharide.
J.Biol.Chem., 287, 2012
6F6P
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BU of 6f6p by Molmil
Crystal structure of tetrameric human Rabin8 GEF domain
Descriptor: Rab-3A-interacting protein
Authors:Lorentzen, E, Vetter, M.
Deposit date:2017-12-06
Release date:2017-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of tetrameric human Rabin8 GEF domain.
Proteins, 86, 2018
9H2D
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BU of 9h2d by Molmil
Human IFT172 C-terminal U-box domain crystal structure
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Intraflagellar transport protein 172 homolog
Authors:Lorentzen, E, Zacharia, N.K, Bhogaraju, S.
Deposit date:2024-10-11
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Intraflagellar transport protein IFT172 contains a C-terminal ubiquitin-binding U-box-like domain involved in ciliary signaling
To Be Published
8VJN
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BU of 8vjn by Molmil
Myxococcus xanthus encapsulin cargo protein EncD in complex with flavin mononucleotide
Descriptor: Encapsulin nanocompartment cargo protein EncD, FLAVIN MONONUCLEOTIDE
Authors:Eren, E.
Deposit date:2024-01-07
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VJO
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BU of 8vjo by Molmil
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Descriptor: EncA, Encapsulin nanocompartment cargo protein EncD
Authors:Eren, E.
Deposit date:2024-01-07
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity.
Proc.Natl.Acad.Sci.USA, 121, 2024
6CF2
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BU of 6cf2 by Molmil
Crystal structure of HIV-1 Rev (residues 1-93)-RNA aptamer complex
Descriptor: Anti-Rev Antibody, heavy chain, light chain, ...
Authors:Eren, E, Dearborn, A.D, Wingfield, P.T.
Deposit date:2018-02-13
Release date:2018-07-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of an RNA Aptamer that Can Inhibit HIV-1 by Blocking Rev-Cognate RNA (RRE) Binding and Rev-Rev Association.
Structure, 26, 2018
6CVK
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BU of 6cvk by Molmil
Hepatitis B e-antigen in complex with scFv e13
Descriptor: Capsid protein, Single chain variable fragment (scFv) e13
Authors:Eren, E, Steven, A.C, Wingfield, P.T.
Deposit date:2018-03-28
Release date:2018-08-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structures of Hepatitis B Virus Core- and e-Antigen Immune Complexes Suggest Multi-point Inhibition.
Structure, 26, 2018
6CWT
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BU of 6cwt by Molmil
Hepatitis B core-antigen in complex with Fab e21
Descriptor: Capsid protein, Fab e21 heavy chain, Fab e21 light chain
Authors:Eren, E, Steven, A.C, Wingfield, P.T.
Deposit date:2018-03-30
Release date:2018-08-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.151 Å)
Cite:Structures of Hepatitis B Virus Core- and e-Antigen Immune Complexes Suggest Multi-point Inhibition.
Structure, 26, 2018
6CWD
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BU of 6cwd by Molmil
Hepatitis B core-antigen in complex with scFv e13
Descriptor: Capsid protein, Single chain variable fragment (scFv) e13
Authors:Eren, E, Steven, A.C, Wingfield, P.T.
Deposit date:2018-03-30
Release date:2018-08-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:Structures of Hepatitis B Virus Core- and e-Antigen Immune Complexes Suggest Multi-point Inhibition.
Structure, 26, 2018
7S5C
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BU of 7s5c by Molmil
M. xanthus ferritin-like protein EncB
Descriptor: CALCIUM ION, EncB, FE (III) ION
Authors:Eren, E.
Deposit date:2021-09-10
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S5K
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BU of 7s5k by Molmil
M. xanthus ferritin-like protein EncB
Descriptor: CALCIUM ION, EncB, FE (III) ION
Authors:Eren, E.
Deposit date:2021-09-10
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S8T
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BU of 7s8t by Molmil
M. xanthus ferritin-like protein EncC
Descriptor: EncC, FE (III) ION
Authors:Eren, E.
Deposit date:2021-09-19
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S4Q
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BU of 7s4q by Molmil
M. xanthus encapsulin EncA bound to EncC targeting peptide
Descriptor: EncA, EncC targeting peptide
Authors:Eren, E.
Deposit date:2021-09-09
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S21
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BU of 7s21 by Molmil
M. xanthus encapsulin shell protein EncA with T=1 symmetry
Descriptor: EncA
Authors:Eren, E.
Deposit date:2021-09-02
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S20
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BU of 7s20 by Molmil
M. xanthus encapsulin shell protein EncA with T=3 symmetry
Descriptor: EncA
Authors:Eren, E.
Deposit date:2021-09-02
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7S2T
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BU of 7s2t by Molmil
M. xanthus encapsulin EncA bound to EncB targeting peptide
Descriptor: EncA, EncB targeting peptide
Authors:Eren, E.
Deposit date:2021-09-03
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural characterization of the Myxococcus xanthus encapsulin and ferritin-like cargo system gives insight into its iron storage mechanism.
Structure, 30, 2022
7U0F
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BU of 7u0f by Molmil
HIV-1 Rev in complex with tubulin
Descriptor: Protein Rev, Tubulin alpha-1A chain, Tubulin beta chain
Authors:Eren, E.
Deposit date:2022-02-18
Release date:2023-08-23
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural basis of microtubule depolymerization by the kinesin-like activity of HIV-1 Rev.
Structure, 31, 2023
8B5Y
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BU of 8b5y by Molmil
SHP2 in complex with allosteric imidazopyrazine inhibitor
Descriptor: (1~{S})-1'-[5-[2-(trifluoromethyl)pyridin-3-yl]sulfanyl-3~{H}-imidazo[4,5-b]pyrazin-2-yl]spiro[1,3-dihydroindene-2,4'-piperidine]-1-amine, FORMIC ACID, Tyrosine-protein phosphatase non-receptor type 11
Authors:Torrente, E, Petrocchi, A.
Deposit date:2022-09-25
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Discovery of a Novel Series of Imidazopyrazine Derivatives as Potent SHP2 Allosteric Inhibitors.
Acs Med.Chem.Lett., 14, 2023
3LCP
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BU of 3lcp by Molmil
Crystal structure of the carbohydrate recognition domain of LMAN1 in complex with MCFD2
Descriptor: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53
Authors:Wigren, E, Bourhis, J.M, Kursula, I, Guy, J.E, Lindqvist, Y.
Deposit date:2010-01-11
Release date:2010-01-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of the LMAN1-CRD/MCFD2 transport receptor complex provides insight into combined deficiency of factor V and factor VIII.
Febs Lett., 584, 2010
4BA1
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BU of 4ba1 by Molmil
Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, PHOSPHATE ION, ...
Authors:Lorentzen, E, Conti, E.
Deposit date:2012-09-10
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a 9-Subunit Archaeal Exosome in Pre-Catalytic States of the Phosphorolytic Reaction.
Archaea, 2012, 2012
4BA2
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BU of 4ba2 by Molmil
Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate
Descriptor: 5'-R(*AP*AP*AP*AP)-3', PENTAETHYLENE GLYCOL, PHOSPHATE ION, ...
Authors:Lorentzen, E, Conti, E.
Deposit date:2012-09-10
Release date:2012-10-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Crystal Structure of a 9-Subunit Archaeal Exosome in Pre-Catalytic States of the Phosphorolytic Reaction.
Archaea, 2012, 2012

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