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PDB: 522 results

4U3E
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BU of 4u3e by Molmil
Anaerobic ribonucleotide reductase
Descriptor: ACETATE ION, CITRIC ACID, GLYCEROL, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-07-20
Release date:2014-09-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant.
Proc.Natl.Acad.Sci.USA, 111, 2014
6VJG
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BU of 6vjg by Molmil
Csx3-I222 Crystal Form at 1.8 Angstrom Resolution
Descriptor: CRISPR-associated protein, Csx3 family
Authors:Brown, S, Charbonneau, A, Burman, N, Gauvin, C.C, Lawrence, C.M.
Deposit date:2020-01-15
Release date:2020-09-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Csx3 is a cyclic oligonucleotide phosphodiesterase associated with type III CRISPR-Cas that degrades the second messenger cA 4 .
J.Biol.Chem., 295, 2020
6DS2
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BU of 6ds2 by Molmil
Crystal structure of Ni(II)-bound human calprotectin
Descriptor: NICKEL (II) ION, Protein S100-A8, Protein S100-A9, ...
Authors:Nolan, E.M, Drennan, C.L, Nakashige, T.G.
Deposit date:2018-06-13
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biophysical Examination of the Calcium-Modulated Nickel-Binding Properties of Human Calprotectin Reveals Conformational Change in the EF-Hand Domains and His3Asp Site.
Biochemistry, 57, 2018
6XN6
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BU of 6xn6 by Molmil
ScoE with the CABA substrate bound and His299 and Arg157 flipped out
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-02
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
6XO3
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BU of 6xo3 by Molmil
ScoE with alpha-ketoglutarate in an off-site
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-06
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
2Z8Y
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BU of 2z8y by Molmil
Xenon-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase(CODH/ACS) from Moorella thermoacetica
Descriptor: COPPER (I) ION, Carbon monoxide dehydrogenase/acetyl CoA synthase subunit alpha, Carbon monoxide dehydrogenase/acetyl CoA synthase subunit beta, ...
Authors:Doukov, T.I, Blasiak, L.C, Drennan, C.L.
Deposit date:2007-09-12
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Xenon in and at the End of the Tunnel of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-CoA Synthase
Biochemistry, 47, 2008
7TSJ
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BU of 7tsj by Molmil
Xenon-bound structure of carbon monoxide dehydrogenase (CODH) from Desulfovibrio vulgaris
Descriptor: Carbon monoxide dehydrogenase, FE2/S2 (INORGANIC) CLUSTER, Fe(4)-Ni(1)-S(4) cluster, ...
Authors:Biester, A, Drennan, C.L.
Deposit date:2022-01-31
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Visualizing the gas channel of a monofunctional carbon monoxide dehydrogenase.
J.Inorg.Biochem., 230, 2022
4K36
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BU of 4k36 by Molmil
His6 tagged anSMEcpe with bound AdoMet
Descriptor: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-04-10
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
5BWE
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BU of 5bwe by Molmil
Benzylsuccinate synthase alpha-beta-gamma complex with bound toluene and fumarate
Descriptor: FUMARIC ACID, IRON/SULFUR CLUSTER, TOLUENE, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-06-07
Release date:2015-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Substrate-bound Structures of Benzylsuccinate Synthase Reveal How Toluene Is Activated in Anaerobic Hydrocarbon Degradation.
J.Biol.Chem., 290, 2015
4M7S
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BU of 4m7s by Molmil
Crystal structure of SeMet BtrN in an OPEN conformation
Descriptor: BtrN, GLYCEROL, IMIDAZOLE, ...
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2013-08-12
Release date:2013-10-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.
Proc.Natl.Acad.Sci.USA, 110, 2013
6AUI
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BU of 6aui by Molmil
Human ribonucleotide reductase large subunit (alpha) with dATP and CDP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Brignole, E.J, Drennan, C.L, Asturias, F.J, Tsai, K.L, Penczek, P.A.
Deposit date:2017-09-01
Release date:2018-04-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:3.3- angstrom resolution cryo-EM structure of human ribonucleotide reductase with substrate and allosteric regulators bound.
Elife, 7, 2018
4IL7
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BU of 4il7 by Molmil
Crystal structure of A223 C-terminal domain, a structural protein from sulfolobus turreted icosahedral virus (STIV)
Descriptor: Putative uncharacterized protein
Authors:Sendamarai, A.K, Lawrence, C.M.
Deposit date:2012-12-29
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
6UO0
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BU of 6uo0 by Molmil
Crystal structure of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-14
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
5C8A
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Crystal structure of a truncated form of Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8E
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BU of 5c8e by Molmil
Crystal structure of Thermus thermophilus CarH bound to adenosylcobalamin and a 26-bp DNA segment
Descriptor: 26-mer DNA segment containing the CarH operator sequence (antisense strand), 26-mer DNA segment containing the CarH operator sequence (sense strand), 5'-DEOXYADENOSINE, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
5C8D
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BU of 5c8d by Molmil
Crystal structure of full-length Thermus thermophilus CarH bound to adenosylcobalamin (dark state)
Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, Light-dependent transcriptional regulator CarH
Authors:Jost, M, Drennan, C.L.
Deposit date:2015-06-25
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for gene regulation by a B12-dependent photoreceptor.
Nature, 526, 2015
4RGA
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BU of 4rga by Molmil
Phage 1358 receptor binding protein in complex with the trisaccharide GlcNAc-Galf-GlcOMe
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-galactofuranose-(1-6)-methyl alpha-D-glucopyranoside, Phage 1358 receptor binding protein (ORF20)
Authors:Spinelli, S, Mccabe, O, Farenc, C, Tremblay, D, Blangy, S, Oscarson, S, Moineau, S, Cambillau, C.
Deposit date:2014-09-29
Release date:2015-05-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The targeted recognition of Lactococcus lactis phages to their polysaccharide receptors.
Mol.Microbiol., 96, 2015
6UQB
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BU of 6uqb by Molmil
Crystal structure of R471A variant of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate and malonate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-18
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
6UQL
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BU of 6uql by Molmil
Crystal structure of R471A variant of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-21
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
6UOI
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BU of 6uoi by Molmil
Crystal structure of cytosolic fumarate hydratase from Leishmania major in a complex with malonate
Descriptor: FE (III) ION, FE3-S4 CLUSTER, Fumarate hydratase 2, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-15
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
4BZO
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BU of 4bzo by Molmil
Crystal structure of PIM1 in complex with a Pyrrolo-Pyrazinone inhibitor
Descriptor: N-[(1S)-2-AMINO-1-PHENYLETHYL]-2-[(4S)-7-(2-FLUORO-4-PYRIDINYL)-1-OXO-1,2,3,4-TETRAHYDROPYRROLO[1,2-A]PYRAZIN-4-YL]ACETAMIDE, SERINE/THREONINE-PROTEIN KINASE PIM-1
Authors:Casale, E, Casuscelli, F, Ardini, E, Avanzi, N, Cervi, G, D'Anello, M, Donati, D, Faiardi, D, Ferguson, R.D, Fogliatto, G, Galvani, A, Marsiglio, A, Mirizzi, D.G, Montemartini, M, Orrenius, C, Papeo, G, Piutti, C, Salom, B, Felder, E.R.
Deposit date:2013-07-29
Release date:2013-10-30
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery and Optimization of Pyrrolo[1,2-A]Pyrazinones Leads to Novel and Selective Inhibitors of Pim Kinases.
Bioorg.Med.Chem., 21, 2013
5COJ
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BU of 5coj by Molmil
Structure of Hydroxyethylthiazole kinase ThiM from Staphylococcus aureus in complex with native substrate 2-(4-methyl-1,3-thiazol-5-yl)ethanol.
Descriptor: 2-(4-METHYL-THIAZOL-5-YL)-ETHANOL, Hydroxyethylthiazole kinase, MAGNESIUM ION
Authors:Drebes, J, Kuenz, M, Eberle, R.J, Oberthuer, D, Cang, H, Wrenger, C, Betzel, C.
Deposit date:2015-07-20
Release date:2016-03-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections.
Sci Rep, 6, 2016
4BZN
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BU of 4bzn by Molmil
Crystal structure of PIM1 in complex with a Pyrrolo(1,2-a)Pyrazinone inhibitor
Descriptor: N-(2,2-dimethylpropyl)-2-[1-oxo-7-(thiophen-3-yl)-1,2,3,4-tetrahydropyrrolo[1,2-a]pyrazin-4-yl]acetamide, SERINE/THREONINE-PROTEIN KINASE PIM-1
Authors:Casale, E, Casuscelli, F, Ardini, E, Avanzi, N, Cervi, G, D'Anello, M, Donati, D, Faiardi, D, Ferguson, R.D, Fogliatto, G, Galvani, A, Marsiglio, A, Mirizzi, D.G, Montemartini, M, Orrenius, C, Papeo, G, Piutti, C, Salom, B, Felder, E.R.
Deposit date:2013-07-29
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Optimization of Pyrrolo[1,2-A]Pyrazinones Leads to Novel and Selective Inhibitors of Pim Kinases.
Bioorg.Med.Chem., 21, 2013
6UQ9
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BU of 6uq9 by Molmil
Crystal structure of R421A variant of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-18
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
6UQM
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BU of 6uqm by Molmil
Crystal structure of R173A variant of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-21
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019

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