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PDB: 283 results

1AMX
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COLLAGEN-BINDING DOMAIN FROM A STAPHYLOCOCCUS AUREUS ADHESIN
Descriptor: COLLAGEN ADHESIN
Authors:Symersky, J, Narayana, S.
Deposit date:1997-06-19
Release date:1998-06-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the collagen-binding domain from a Staphylococcus aureus adhesin.
Nat.Struct.Biol., 4, 1997
2NW8
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Crystal Structure of Tryptophan 2,3-dioxygenase (TDO) from Xanthomonas campestris in complex with ferrous heme and tryptophan. Northeast Structural Genomics Target XcR13.
Descriptor: MANGANESE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, TRYPTOPHAN, ...
Authors:Forouhar, F, Anderson, J.L.R, Mowat, C.G, Bruckmann, C, Thackray, S.J, Seetharaman, J, Ho, C.K, Ma, L.C, Cunningham, K, Janjua, H, Zhao, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Champman, S.K, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-11-14
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular insights into substrate recognition and catalysis by tryptophan 2,3-dioxygenase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2NW7
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Crystal Structure of Tryptophan 2,3-dioxygenase (TDO) from Xanthomonas campestris in complex with ferric heme. Northeast Structural Genomics Target XcR13
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase
Authors:Forouhar, F, Anderson, J.L.R, Mowat, C.G, Hussain, A, Bruckmann, C, Thackray, S.J, Seetharaman, J, Tucker, T, Ho, C.K, Ma, L.C, Cunningham, K, Janjua, H, Zhao, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Chapman, S.K, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-11-14
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular insights into substrate recognition and catalysis by tryptophan 2,3-dioxygenase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5J1D
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X-ray crystal structure of Phosphate binding protein (PBP) from Stenotrophomonas maltophilia
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphate binding protein
Authors:Hatti, K, Gulati, A, Narayanswamy, S, Murthy, M.R.N.
Deposit date:2016-03-29
Release date:2016-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of crystal structures of proteins of unknown identity using a marathon molecular replacement procedure: structure of Stenotrophomonas maltophilia phosphate-binding protein.
Acta Crystallogr D Struct Biol, 72, 2016
1HFD
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HUMAN COMPLEMENT FACTOR D IN A P21 CRYSTAL FORM
Descriptor: COMPLEMENT FACTOR D
Authors:Jing, H, Babu, Y.S, Moore, D, Kilpatrick, J.M, Liu, X.-Y, Volanakis, J.E, Narayana, S.V.L.
Deposit date:1998-06-18
Release date:1999-06-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of native and complexed complement factor D: implications of the atypical His57 conformation and self-inhibitory loop in the regulation of specific serine protease activity.
J.Mol.Biol., 282, 1998
1DFP
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FACTOR D INHIBITED BY DIISOPROPYL FLUOROPHOSPHATE
Descriptor: DIISOPROPYL PHOSPHONATE, FACTOR D
Authors:Cole, L.B, Chu, N, Kilpatrick, J.M, Volanakis, J.E, Narayana, S.V.L, Babu, Y.S.
Deposit date:1997-02-18
Release date:1998-02-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of diisopropyl fluorophosphate-inhibited factor D.
Acta Crystallogr.,Sect.D, 53, 1997
1R17
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Crystal Structure Analysis of S.epidermidis adhesin SdrG binding to Fibrinogen (adhesin-ligand complex)
Descriptor: CALCIUM ION, fibrinogen-binding protein SdrG, fibrinopeptide B
Authors:Ponnuraj, K, Bowden, M.G, Davis, S, Gurusiddappa, S, Moore, D, Choe, D, Xu, Y, Hook, M, Narayana, S.V.L.
Deposit date:2003-09-23
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A "dock, lock and latch" Structural Model for a Staphylococcal Adhesin Binding to Fibrinogen
Cell(Cambridge,Mass.), 115, 2003
7F5Y
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
Descriptor: FORMIC ACID, Single-stranded DNA-binding protein
Authors:Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
Deposit date:2021-06-23
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
7F5Z
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Crystal structure of the single-stranded dna-binding protein from Mycobacterium tuberculosis- Form III
Descriptor: Single-stranded DNA-binding protein
Authors:Srikalaivani, R, Paul, A, Sriram, R, Narayanan, S, Gopal, B, Vijayan, M.
Deposit date:2021-06-23
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural variability of Mycobacterium tuberculosis SSB and susceptibility to inhibition.
Curr.Sci., 122, 2022
2VEO
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X-ray structure of Candida antarctica lipase A in its closed state.
Descriptor: GLYCEROL, LIPASE A, TETRAETHYLENE GLYCOL, ...
Authors:Ericsson, D.J, Kasrayan, A, Johansson, P, Bergfors, T, Sandstrom, A.G, Backvall, J.E, Mowbray, S.L.
Deposit date:2007-10-25
Release date:2007-11-06
Last modified:2015-04-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-Ray Structure of Candida Antarctica Lipase a Shows a Novel Lid Structure and a Likely Mode of Interfacial Activation.
J.Mol.Biol., 376, 2008
1R19
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Crystal Structure Analysis of S.epidermidis adhesin SdrG binding to Fibrinogen (Apo structure)
Descriptor: fibrinogen-binding protein SdrG
Authors:Ponnuraj, K, Bowden, M.G, Davis, S, Gurusiddappa, S, Moore, D, Choe, D, Xu, Y, Hook, M, Narayana, S.V.L.
Deposit date:2003-09-23
Release date:2003-10-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:A "dock, lock and latch" Structural Model for a Staphylococcal Adhesin Binding to Fibrinogen
Cell(Cambridge,Mass.), 115, 2003
1FDP
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PROENZYME OF HUMAN COMPLEMENT FACTOR D, RECOMBINANT PROFACTOR D
Descriptor: PROENZYME OF COMPLEMENT FACTOR D
Authors:Jing, H, Macon, K.J, Moore, D, Delucas, L.J, Volanakis, J.E, Narayana, S.V.L.
Deposit date:1998-12-03
Release date:1999-12-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of profactor D activation: from a highly flexible zymogen to a novel self-inhibited serine protease, complement factor D.
Embo J., 18, 1999
1GCA
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THE 1.7 ANGSTROMS REFINED X-RAY STRUCTURE OF THE PERIPLASMIC GLUCOSE(SLASH)GALACTOSE RECEPTOR FROM SALMONELLA TYPHIMURIUM
Descriptor: CALCIUM ION, GLUCOSE/GALACTOSE-BINDING PROTEIN, beta-D-galactopyranose
Authors:Zou, J.-Y, Mowbray, S.L.
Deposit date:1993-05-13
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 A refined X-ray structure of the periplasmic glucose/galactose receptor from Salmonella typhimurium.
J.Mol.Biol., 233, 1993
1QXA
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Crystal structure of Sortase B complexed with Gly3
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, NPQTN specific sortase B, peptide GLY-GLY-GLY
Authors:Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
Deposit date:2003-09-05
Release date:2004-04-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1D2P
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CRYSTAL STRUCTURE OF TWO B REPEAT UNITS (B1B2) OF THE COLLAGEN BINDING PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS
Descriptor: COLLAGEN ADHESIN
Authors:Deivanayagam, C.C.S, Rich, R.L, Hook, M, Narayana, S.V.L.
Deposit date:1999-09-25
Release date:2000-09-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel fold and assembly of the repetitive B region of the Staphylococcus aureus collagen-binding surface protein.
Structure Fold.Des., 8, 2000
1QX6
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Crystal structure of Sortase B complexed with E-64
Descriptor: N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, NPQTN specific sortase B
Authors:Zong, Y, Mazmanian, S.K, Schneewind, O, Narayana, S.V.
Deposit date:2003-09-04
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of sortase B, a cysteine transpeptidase that tethers surface protein to the Staphylococcus aureus cell wall
Structure, 12, 2004
1RK2
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E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP, SOLVED IN SPACE GROUP P212121
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RIBOKINASE, ...
Authors:Sigrell, J.A, Cameron, A.D, Mowbray, S.L.
Deposit date:1999-05-20
Release date:1999-09-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Induced fit on sugar binding activates ribokinase.
J.Mol.Biol., 290, 1999
2MX2
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UBX-L domain of VCIP135
Descriptor: Deubiquitinating protein VCIP135
Authors:Iwazu, T, Murayama, S, Igarashi, R, Hrioaki, H, Shirakawa, M, Tochio, H.
Deposit date:2014-12-07
Release date:2016-07-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and interaction mode of the UBX-L domain of VCIP135 determined by solution NMR spectroscopy
To be Published
1ZI7
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Structure of truncated yeast oxysterol binding protein Osh4
Descriptor: KES1 protein, SULFATE ION
Authors:Im, Y.J, Raychaudhuri, S, Prinz, W.A, Hurley, J.H.
Deposit date:2005-04-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural mechanism for sterol sensing and transport by OSBP-related proteins
Nature, 437, 2005
1Z3W
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Structure of Phanerochaete chrysosporium cellobiohydrolase Cel7D (CBH58) in complex with cellobioimidazole
Descriptor: (5R,6R,7R,8S)-7,8-dihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-6-yl beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, cellulase
Authors:Ubhayasekera, W, Vasella, A, Stahlberg, J, Mowbray, S.L.
Deposit date:2005-03-14
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Phanerochaete chrysosporium Cel7D in complex with product and inhibitors
Febs J., 272, 2005
1RWB
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Cooperative Effect of Two Surface Amino Acid Mutations (Q252L and E170K) of Glucose Dehydrogenase from Bacillus megaterium IWG3 for the stabilization of Oligomeric State
Descriptor: Glucose 1-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baik, S.-H, Michel, F, Haser, R, Harayama, S.
Deposit date:2003-12-16
Release date:2003-12-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cooperative effect of two surface amino acid mutations (Q252L and E170K) in glucose dehydrogenase from Bacillus megaterium IWG3 on stabilization of its oligomeric state.
Appl.Environ.Microbiol., 71, 2005
1Z3T
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Structure of Phanerochaete chrysosporium cellobiohydrolase Cel7D (CBH58) in complex with cellobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, cellulase
Authors:Ubhayasekera, W, Stahlberg, J, Mowbray, S.L.
Deposit date:2005-03-14
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Phanerochaete chrysosporium Cel7D in complex with product and inhibitors
Febs J., 272, 2005
1GCG
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THE 1.9 ANGSTROMS X-RAY STRUCTURE OF A CLOSED UNLIGANDED FORM OF THE PERIPLASMIC GLUCOSE(SLASH)GALACTOSE RECEPTOR FROM SALMONELLA TYPHIMURIUM
Descriptor: CALCIUM ION, GALACTOSE/GLUCOSE-BINDING PROTEIN
Authors:Flocco, M.M, Mowbray, S.L.
Deposit date:1994-02-03
Release date:1994-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9 A x-ray structure of a closed unliganded form of the periplasmic glucose/galactose receptor from Salmonella typhimurium.
J.Biol.Chem., 269, 1994
1D2O
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CRYSTAL STRUCTURE OF A SINGLE B REPEAT UNIT (B1) OF COLLAGEN BINDING SURFACE PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS.
Descriptor: COLLAGEN ADHESIN
Authors:Deivanayagam, C.C.S, Rich, R.L, Hook, M, Narayana, S.V.L.
Deposit date:1999-09-25
Release date:2000-09-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel fold and assembly of the repetitive B region of the Staphylococcus aureus collagen-binding surface protein.
Structure Fold.Des., 8, 2000
1GQT
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Activation of Ribokinase by Monovalent Cations
Descriptor: CESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RIBOKINASE, ...
Authors:Andersson, C.E, Mowbray, S.L.
Deposit date:2001-12-05
Release date:2002-01-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Activation of Ribokinase by Monovalent Cations.
J.Mol.Biol., 315, 2002

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